morexGenes - Barley RNA-seq Database

Contig contig_272709

Source Contig contig_272709

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_272709 (1470 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_272709

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43793	1	592 bp	MLOC_43793.1	Available	Available	None
MLOC_43792	1	243 bp	None	Available	Available	None

CDS Structure of MLOC_43793

CDS Structure of MLOC_43792

Contig Sequence (1470 bp)

>contig_272709 1470 assembly3_WGSMorex_rbca.fasta
CCCTCCGCTGGCTCCTCGCTCGGTTCCCCCGAACGGAATCGGCCGAGCGCACCACCCACC
CCCTCCTGTCCCCCAGATCCACACGCACCGCTGTGCCTGCGCACAGCCAGAGCGCAGCCC
CGGATCCCGTCCCCTAGATCCGCCCCGCCTCTCCGGCCCAAGCTCTCCAAGAGGAGGAGG
AGGAGCATTCGTCCTCGGGCAGCGGGATGGAGGGCCTGGCGCAGTGGGCCGCGCTGCTGC
GGGAGTCGCTGGGCCAGAGACAGGCGGCCACGGACGCCGTCGTCTCCATCCTCGACTCCT
TCGACAGCCGCCTCTCCCTGCTCGACTGCCACCTCTCCCACTCCTCCATCCACTAGAACT
GGAACCGGAAGCAACTGCCACTCACCAGGTCAGTTGTTCTCGTCTGCTCTGCCCGCGCAC
TATAGGTGCTTGCGTTTATTCCCACCAGCACCATCTTCCTTCCGCTGTGACCTTCCTAGC
TAGATCCAGCACCCAGTTGCCTACCGCGTGCACGCACGCTTCTTTGCGTCAAGTGGAATA
AATTAAGTCAATAATGGCCACCATACAATACAACAAGATACGAGCTTGAGCTTGAAACGA
ATAAAGTTGGGCCTTGTGGGATTATTGTTTTAGCTTGAGCTTGAGCTTGAAACGAATACA
ATACAATACAACAAGGCCCGGAGCATAGTCTTTGTTTTACTCTTGGATTTGCAATTAGTT
CCGTTGAGAAGATCCGATGGACGGCGGTGGCAATGTGTAGATGGACATACACATCCTCGA
CTCAAGAATATCGCTGCCTCGTTCGGACTGATCACTTGTTTTGGTATGCCACAACTGAGG
CTCCTTCAGTTCTCTACCAGTTTATCAGTAGAGGCTCCTTAGGTACTAAAGGTGCACATT
CGCTTGCTTATCCAGCAGCCAAACCAATTTTGATCCTGGCCTTCCATCAGCACCATGCAT
ACCGGCACAGGTACCCAGTGGTTGTTAATTAGGACTCATAGACTTGAGCCTTGTGCAACC
TTGCACGCTACTCAGTTTTTTTCTTTTTGTGAAATAGTAAAATCTTACTCTACATGTTAG
AACAACTGTTAATTAACTAGAGCCTAACGAATCAAAACACACATTTTAATATATTTTTTA
AGAAAACCAACGTGCCTCTCCCCGATACATACAGAGTATTCTCTCGGACGATAGGAGTAG
TTCGTATTATTATTGATAGGTATTGGTTTATTTGAAGATGATGACAGCCCCTTGTCCTTG
TTTTTTTTTCTTTTCAACCTGTGTGACAAGAAGTGTTGTTTATAATAATAAAGAAACAGT
AATTTGCAGAAGATATTTCTCACTGAGCTTATGGAGGCAATTGTGTCTCGTCTCATGCTA
TATTGTGGCAATGGATAGGCTATAGCGCTTTCGGGGTACTCACTACTGAAATTCATAAAT
TTGCCGTCTGCCAAAGCAGACGGCAAAGCG