Map Locations of contig_272626 (4037 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_272626

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43774 1 213 bp MLOC_43774.1 Available Available None





CDS Structure of MLOC_43774






Contig Sequence (4037 bp)

>contig_272626 4037 assembly3_WGSMorex_rbca.fasta
TTTTCTGGAGCCCCAAAAATCTCGAGAAAAATATATAAAAATCAGCGTAACGGAAGCTTC
CGGATCACCGAAGATGGTCCAGAGGGGGGCCAGGGCCTGCCCAGGCGCCGTCCCCGCCGC
CCGCGGGCCCCCGCCCGCCCCCCGCCACGCCGCCGAGCGGCCGCCTAGCAGAGGCGGCCA
CCACCGCGGCGGCGCATTGCCTCGTGGCCCGCGCGAGGAAGCGCGCGGCTACCATCTCCG
CGCTGCGCTAGAACCGGGAGCGGCGGGGGGGTTTCCGGCGGATTCGCGAGGCGGGCGCCG
AGGAGGAGGGCGGGGGGGGAGGAGAGAGGGATCGAAACGTCTGGAAGGGAATTGCGGCCA
GCGGGGGAAGGGAAGAGCGCCTAGGGATCGAAGCGAATGACCGTTATACCCCGTGAATAC
ATCGCGAGGCAGGGGTGGGCTGGCAGGGGTATTTGTGTCTTCTGCAGGGAATTTTGTGGG
ATCAACTTGTCGTCCAAGAAGGGTTTAAGGGTTTGAGCGGTTTGGGTTATCTGACCGCTG
ACATTCTTTTTTTTCTTATTCTTTCTGAAAGGTCCGCTGGCCTTCTTGAGAATTCTTGAT
TTTGTTTATATCGGCTATTTTTCTTTTTAATTAGCAGTTTACTTTGAGTCATCAGCGGTG
TGTTGGTTGTAGCGTGAAAATTGAATAACTTTCGAATGGTCGGATCCGATTTAATGTCGT
TGAACATATCAATCCTTATAAAAAAAACTGCCGTATAATATTTTGTTATTGGTCTTAACA
AAATCATTAAATATATGTAACATCGAAGACAATGCTTGTTGCATTAAAAAGAAAAGACTT
ACAATATGAACACAACATTTGGTTTGAAGACTACGTCGATACGAGGTGGCATGGCGTCAA
CTATCCGAACCACGAAAAAAAACATTGTTGAGTCCCTTGTGTTTGTGTCCTCTATACTCC
TATTTTACTTTGTTGCAAGTTACTTTTCCCGTTCCCATGCTCTTGTAGATTGCTTGTTTA
GTCATAAGGATCAATTAGAGTATTTGGTGTAAATTTTACAAACTTTCTAAAACTTTGTGT
AGAGTTTTTATGAGAATATTTGACGAGTCGATAAACAATGTGGGCACACTTTTGCCTCCC
TACATGCTCTTCATAACCATCATATGGTGTGCTCTACTTGCCCCGACTGGTGTGGCCTCG
CAAGACGGATGGCGACGTCCATTCCCTACCCAGTCGCCGACAACCACCCCTTATGTCGAC
GCACCTCACCACAACCACCACAACAACGACGGTGGTCGGGTCCATGATCCATTTGGCTCC
AGACTGAGGTGGTGGGGCATGCCCTCGTCGATTCCTCCAGCTCCAGACAACCAAGGAAGA
ACAACGGGCTCACAACGATGAGCGGGGCACTCAATGTCTCAATGGTTATCATTGTTGGGA
GCAAGTAGAAGGAAGAGTCATAGTACGGAGTGGAGGAGGACAACATAAACCATCGCACAC
CCAACATCTGTACGGAGCCCTCCCTTTAGTGAGAAGGACATAGAGAAGCGATAGGTAACA
ACGGAAGGCCACTAGCGAAGTGAAGCTCTCCATTCGCCGAGCAAACCATGCGCACACTAT
CACTCACACCCACAACACCGCTAGAAAAAGAAGGCAAAGAAACTAGTGTCTCGCCACCCT
GTTCTTCCTTGCGACTACTGCCGACCTGATTTCCTATACCCTCAACAATCCGCAACACAC
CAAGGACGACATCTGATCTAGAAAAACGTATACACGTGCCACACTTTACTGAAAATGTAA
CGTGTGAGATCCTGGTTAATAGGATTGATAGACCGCTTATATCGACAAGGTACGCCTTTG
GTTCGAAGCTCGTCTTCAAAAACCCCCCATGTTAAGCATGTTTGGCCTCGAAAAAATTGA
GAACACGTAACTGATCGAAAAGTTGTTCCCGGATGCGCATAAGTGATGACAAAATGCAAA
AAAAAGACTAGTGTTAGTTTGTGGGACCATTGTACATCTCAAACCTATCAATAATTTTTG
TTATGTTCATTCTACTTATTGCATCACTTTAATATTTTTTATTGATTTGTCGAATTAACC
TATTAATCAAGTGCCTAGTGTCATTTGTTGTTTTCTGCATATTTTTTATTTTGATTTGGG
GACCAAAAAATTTAAGAATGTGAAGTTTCAAGCAAGACTAGAAAGACTCCACCATGGCTC
CATGCACCCTAGGGCTGAGAGCGAGGAAATACCACATGGAGCCCCTCGGCCTACTCTATG
CCGCATCTCGGTCCCCTGGCTCTATATATACCTAAAACCATCATAAAGAGTTTTACATGA
TTTTTTTGCATTGCCTCTTTGTTTTTTATACATTTTTGGTACCTTGTTGGAAAGGGAAAA
TTATCTTCTTCAACCTCTACTTCATCCCTTGTTGCTTCACTCATGATGTGAGAGGAGTCC
TCTATCGAGGTGCGACTTTGTACGAGTAGACATGTGCTCTCTCTCTCTCCCTCTCTCCCT
TCCTTCCCCACTCTCTCCCTCCCCCCTCCCTCTCTATCTCTCTTTCTCTCTCTCGCGTGC
GCGTGATCGTATAAGTTTTCTATCTTGATTGTGATCGTGGGCTTTTGTTAATGGAGTTGA
ACTATGTGATATCCCCTTCCTATTCTCTTTGTGGTGAACTGGATCTTGCCATTCTTATGT
GTTTCTTTATGTTGGATTGAATCTTTTGAGAATTAATGGAATTATGTGATACATATGTAG
TATAATTTTTGGAGATACCCGTAGTGGCACCGGGATGACTCTATAGATTAAGATTAGAAC
GATAAAGACCATGAGGTGATTGTTTCATATTTACGGGGCTGCCTGATGTTGACACTAGGG
TGTGCCATGTGGATTAAGATTGGAAAGACAAGCTTAGAGGTGTGCCTAGTCATACCTATG
CTATCTCATCCTTCTTTAATCTCACAGAAGAGGGAACAATGGAGCGATTCTTTACCACAT
TTTTTAGGTTATATTTTGTCTTTTAACTATGCTAATGATGTTGAGAGTTGGCATTAATTA
AACTATGAACACTAAGTGTAGTTTCCAAGCATTGAAATATTATTTTACTCACTCATGTTA
CTTGTTGCCTTGTCCTTACTTATTCCAAAAATAACTAAAAAAATGTTAGCATCCAAAGCT
ATAAATCAATCATCCAAATTTTCAATCTCTTCATCGAACTAGTGCACATATACAATTAAA
AAATGCATTAGGTGTGTCGGGGGCTCAAGAGACTACTTGTATCTTGATTGCAAGATTGTT
CAAGAGACAATACTTTCAACCTACACCGCACCTACAAATTGGTAAACCAAAGGTCATTCA
CTTGACGAGACTACTTGTATCTTGATTGCAATGTTGTTTGAGAGAGAATGCTTTCAACCT
ACACCTCCTACGAATTGGCAAAACAAAGGTCATTCATTTTAAGAAAATTGTTGATGTCCT
ACAATCATGTGCATTTGGACGAAAAACAAAATATACAAGAATATAAGTGTGTGGTAGACA
TCATGCTAGTCTAGATAACACGTGATAGCCATAATTAACGACCACTGGCTTGTGTGAGAG
GCCAGCGTGTCATAAAGTGATATTAAAGCCGACCCTCACAATTACATGGGAAAGCCACAG
GTAACGTCTGCTAGCCTGAGTGAGAGGTCGACGTATCATGAAATGGTATGCAAGCCGACC
CTCGCAGTTACATGGGCATGTGCGGGTCAAGGGTACATACGTGTGGCGCATGGCGTGTGT
GGCCTATCGAGGTGCACCGCATGACACATGTGTCTGCTATACACATGGATGTGTGCTAAG
AGGGAACGTTCCTTTTGGACCGACGAGGGCGTCAAATCTTTTTAAGTTGGTGTATGTGAC
ATCCTGGTCAAATAGGATTGAGTAGTTGTCGTGGTTCATAGGATTGATAGATGCTACTTC
TTCAGCTTGCGTTGGNNNNNNNNNNNNNNNNNNNNNNNNATGCAGCAAAGTAGATAAGTA
TTTTCGTATAACTTCGT