morexGenes - Barley RNA-seq Database

Contig contig_27232

Source Contig contig_27232

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_27232 (340 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_27232

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43721	1	258 bp	MLOC_43721.1	Available	Available	LOC_Os02g47150.1, FRAME:+2, EVALUE:1e-25, 13102.m05304 protein DNA topoisomerase 2, putative, expressed

CDS Structure of MLOC_43721

Contig Sequence (340 bp)

>contig_27232 340 assembly3_WGSMorex_rbca.fasta
TTTGGCACTGACATTATGTTAACTTTCCAGTACTTCAAGAATTCTTTGATTTGAGGTTCA
AATTCTATGTCAACCGGAAGGTACATGTTGATATTTTCCTTTAGTCGTTCATCCGCAAAC
TACTGCATTATTATCTAACAATGTATGTTGTGCAGAAAGTAATGATGGAAAACATGGGGA
ATGAGTTGCTGAAGTATCAGAACAGAGTTAGGTTTATTCTTGCTGTTATTTCCGAGGACA
TCATAGTCAATAACAGGAAGAGGGCAGACCTATTCCTGGAGCTGAAGCAGAAGAACTATA
CACCTTTCCCAAAGAAAAAACCCACGTCTGGGCCAGTTGC