morexGenes - Barley RNA-seq Database

Contig contig_271847
Source Contig contig_271847
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_271847 (5210 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_271847

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43641	1	1626 bp	AK362852	Available	Available	None
CDS Structure of MLOC_43641

Contig Sequence (5210 bp)

>contig_271847 5210 assembly3_WGSMorex_rbca.fasta
CGTCCCCCTCCATCGACGGCTCCTCCGGGCCGCTCTGGGCGGCCGCCCTCGTCGGCCTCC
TGCTCGGCTGGGCCTGGCGCCCGCGCTGGGCCGTCGGCATCGTCGCCCCCGCCGACCCGC
CGCAGCTCGCCTCGCTCGACTTCTAGCAGGCCCAGCTCCCCGCCCGCATCCGCGCCCCCC
TCGACTACCTCGCCGGCGCGCGGCAGCAGCAGGAGGACGACGACGAGGCCTCCCTGCACG
GGTACGTTGCCTGGCTGGCCCGCGAGATGTTCGGTGAAATGCGCGCCTGGTTCTTCCTGC
TGTGGGGAGCAGCTTTTTGGTCAAAGCCGCGTGTTCCTCAGTGGGGAATTTGGCGAAATC
GGAGCGGCCTTCGTTCGCTCACCTTCTGCTGCTGCTGCTTTGCCTTGGCAGGTCGTCGGA
GATGGGGAAGGAGGAGCTGGCGGTGGGGAAGGACGACCTGGTGAACCTCTGGAGGCTGGT
GGAGGGCAACGACGGCGGCCCGGCGTGGATCAAGATGATGGAGAAGGCGCTGCCCAACAT
GACCTACCAGGCCTGGAGGAGGGATCCCCAGGTGAACATCACTTCTCGGTGGACTGATCG
CGTCCTCTTATACCGTACTACTCCTACTTGTTTGATGTGAAGTACTGAATCCTTCCTGAT
TTGGGAGCTAATTACGGGTCTGTACTGTACTTGGATGAAATCAGAATGGGCCTCCGCAAT
ACCAGAGCAGCACAATCTTTGAGAACGCAACCCCGGATGAAGTAAGGGACTTTTTTGGGG
ACGATGAGTTCCGGATGTCCAACAAGTGGGACGATATGCTCATCTCTCACCAGACGCTGG
AGGAGTGCCAGACAACCGGGACGATGAAAGTGCATTGGGTTCGCAAGGTAGATGATCTGG
AGATGGTGAATTAGCTCCGAGTTCTGCTAGGTTTATCGCTTCATGCTTATGGTTTGCTCT
CTTGCTTGCAGTTCCCCTTCTTCTGTAGTGACAGGGAGTACATCATTGCTCGCCGGATAT
GGAAACTGGGAAGCGCGTACTATTGTGTTACAAAGGTAAGGAAACTCGGAAATTTACCAG
TGTTCATCACTTATGCTTCCTTCTATTCTGGGGGTTTGAGGTTTATAGGAGAACCGTGCT
TGATCCTTAGCATATGCTTCTGCTGAAGGAAATTGTGTAAAATTGCAGTTACATCACCAC
AATGTCCATAATCAAATTTATATGTTTCCTTGTTTGCAATGGAAATTTTAGTTACTCCTT
TTGTTTTACAAGAAAAGAATGCACAGTAAGATGCTCCAACATAACAAGGGACTCGTGTGG
AAAATCCTGCGGGCAAAATCAACAGTTTTGCTGCTTTAACATCTGTGTAAACAAATCGAT
GACGTTGACAAAAAATTGCATCGTAGCACATCATCCAACTCAGTTCAGAATAGTCACAGC
TAGGTAAATTTAATGATATAGTTGACTGGACAACGACACTTCTGTGGATACCTTATAAAT
GACAATGAGGTGTCACGTACGGTAACTTGATAAGATCAGCTTTTCTTTGTCAAGCATGCT
GATATCTTTTTCTAATGACAATGATACAAGGCCACTTCTCCATCCTTCGAGTCCATGTAC
CAGGACAGACTTCTAATTTCGTTGAAGTCTTGATATTAATGTTGAGTTGTTGATGGAGGA
AAAGTCTCTGCTGTTTCTTTTTTTCGCTATTATTTGTTTGAAATCAAGCAATGTTGACAG
CTAGATAACCCCTTGCATTAAGTTATCTTTAATAGTGGTAACCACACAATACAAAGGAAC
GAAAAAACCAGGAAGAGTTGGTACATCAGTGTCAAACTTAAAAACATGTCAATACCAGTT
CTGGTTGTAGTTTTATTCCATGCTGTCTTCCTCATCTTAACATCATCTCAATAAAGACAC
GTGCAAGTACCTGTTAATTTGAATTTGGTACCTGGACCGCATTTCATGACTAAATCCATG
TTCTATTGTCTTCGTTCCATTCCTGCTATAACAAAATGTTATTTGATGTCGATACTTATC
ACGTGCCTTATAGAAAGTTCCATGCATACTACTGTTTCCCTTGACATGCTTGTTCGTGTC
ATCTGACATTTATCTCTTCTGTTACTGCATCCCTCTACACTCAGTTATTCATTCTTTGAA
AAATTGATATGATTATGTTTTATATGGCTTCATCAAACTGCCTATTCTATCTTGATGAGA
GTTCTCTCTTGGTTGCTTTTGTAGCTTGTAGGCACATGAAATTAAAGTTAGAAGCAATTG
TGTTATTCTGATTTCCCTAAAAGGAATTATGTAGATTTGGTGGATATCAAGTGTCTCAAT
AATTGTTATTTCAGTTATTTACACACTATGCAGTGATTCTGTAGAGTTTCTCAAAGCTCA
GAGATTTTTTGCATCAGCCAGAAAGTAGCATGACTTTAAAACTTGTGGATGAGAGTGGAT
TAAATTTGTTAATGATCAGCAGTCTAGACTCTTGATGTAACTTCACCTTGCATGGAGTGA
ATACCAGAAGGGGTTGATGTGTACATGTATATCAGGCTTACAAGTTAACATCGTATACTC
TTGCTCAACTACTTATCTGTCTCTGTTTTATGTACATGATGCAGGGTGTGCCATGTTCAT
CCATCCCACGGCGCAGCAAACCTCGCAGAGTAGATTCGTATTACTCAAGCTGGTGCATCC
GTGCAGGTAGCCACTTCCCTTGACTACCTTGTTTGCATATATGTGGCAGGAAGTGAAACG
AAGCAGTTTGAATAGTGAGGTTGAAGGAAATAAATTTTTCTATAGACATGGAAATGAATG
AAATGGAGACTATATTTTCTGGAGATTAATGAAACAATACCACTTTCCTTCCTTCATTTC
TTATTTGACAACTCAGATTCTTTTGTTTTGATCTTGGAACAGTGGAGTCAAGACGAGGGA
ACGGTGGATCGTCTGCCTGCGAGATCCTCTTGTTCCACCATGAGGATATGGGCATCCCAA
ATGAGATTGCGAAGATTGGCATTCGGCAGGGCATGTGGGGATGCGTGAAGAGAATCGAAC
CCGGACTCCGGGCCTATCAGAAAGCCAGGGCTGCTGGGGAGCCACCTTCGCCGAGCGCCT
TGATGGCACGGATCAACACCAAGGTCGGTGACAATTTTGTCCGAGGACTGGAGTCCAACA
GTGACCAATCAGATATCATGGAAGCCGAAGAGAAACCTGTGAAAAACCGTATGGCGAGGT
TCCTTGTGCTCGGCGGGGCCGTGGCCTTGGCGTGTACACTGGACCAAGGGCTCCTGACAA
AGGCTCTCATCTTTGGCGTTGCGCGGAAGTTTGTGGGGCAGAGGAACGCATTGTAGGATC
TGACATCTTCCTCACAATCCTCTGAGCCAATTTGCGTGGAGAGAGCGGAGATGATCTGGC
TAACTGTAGCACATGCCGTTGACGGCAGATGAAGGACATTGGTGTACATATGCTGCCGGC
AGTCGATGAGAGAGAGGGAGGCAACAGAGTAAAAAGATGTAATTTACATTTGGAAAAGGG
ATTCCAGCTATATATGAATTTTTATCTTTGTTTCATGTTATCTTCTATGTGAACTGGATA
TGAGGAAACGTAAATGAGGATGTAATTACTCTTTTGTTCTTTATGAAGTATGTAGTGGCT
CCTCCATTCTGATGGTGAAAGCGAGTAAAATAGTTCTTGAATCAGTTTCACTTCACGTTG
TAAAAAATGGATACTTGCCAATCACTATTTGATTTGGTCAGAGGCGATACGCACTGATAT
ATTTCTGTTGCTTACTCATGTACTATGAAGTACTACTAGCTTTGATTTGCTATGTTTCAA
TGCTTGTAGTCTTTGTTCACGTTTTTTTTTCTTCTATGAAGTATGAGTGCATATATCAAT
TTCAGTATTTGAAATTGCTAACCGGACCTACGTCCGGTACATTATTTTCTTCTATAATTG
CTGCTTTCATGTCTTCTAACATTATTCGATATATACTTTTAATGTTGTATGCATAATTTT
TCAAGTGCAAATATGTTTTGATACAATTTGAAATTTTGTGAAACAATTTATTTCTTGCAT
ACATGAACCCTTTGATATTACTAAATATGTTTTCTTATAAATAAATAAAGGTTGCATTCA
AATCTGTTTTCATATATTTTTAACTTCCACTAATGCCGATATCCATACTGCTCCCTCCAT
TCCTAAATATAAATCATTTTAGATATTTCAATATGGACTATATATGGAGCTAAATGAATG
AATCTACAATCTAAAATATGTTTGTACGCATCAGTACGCAGTATATATTGAAATCTTTAA
AAATACTTATATTTAGAAATGACCTCTTCACCGTGCAAGATGTGACGCGTCTTTCCACGT
ACATGACACCCACTCGCTCTGTTTCTAGCATCCACGGTCTCACATTCAATGCAGAAGATC
CTAATAGTAACGGTAACAAGTCTTTATCCATAGTAAAATTTCACCACACGCTAGCATGTG
CGTGTTGATGGGCCTAACCCACAAAAACGCTGCACAAGCACGTCTGGCCCAGGTCCGGGG
GCTCCTGTTGGTGTAGTTATTCACTACCCTGACTACCCACCGACAAGGTGTGGAGCTCCT
TATCCGAGAAGCACAAGACAAGACTGGTTCATTTTTTACGATCAAGTGTGGAAAATGGAT
ATACATATACAAGATCAAGCAATGCTAGGAAACATCTCGCCCCGGCAAGAGCTGACCCAG
CCTGTCGGCTAGACAGAGCAAAGCAAGGCAGAATCTACTATTCCACCACTCTACGTTAGT
GAGTTGGTGATAGATGTTGATCAACCAAGTGAGTCAACTATAGATGTCAAGATGCATGGC
ATCGATCGAACACGAATTACCTTTATTGACACCCAATCAGGTGCGTGTCAAGGTAGTAAG
TGGTAGGTGAAAGCACATATGCTTCCTTGATGGTTTTGATAATTCATGACNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATAGTCCATAGAGAGCATTGG
CCATAGAATTGTGAGGAGAAGCCCTTCATGCAAGGAAAGGAATAGGATCGGCTCAAGCTT
CAAGCAAGAAGACTCTACATTTTACATTTATGAGAAATCACTTTGAGTCCATAGAAAAGC
CAATACTATTAAAAGGGGGTGAGATATTATGATGAATTGGTTGATCAAGT