morexGenes - Barley RNA-seq Database

Contig contig_271761

Source Contig contig_271761

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_271761 (2701 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_271761

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43628	1	1084 bp	MLOC_43628.1	Available	Available	None

CDS Structure of MLOC_43628

Contig Sequence (2701 bp)

>contig_271761 2701 assembly3_WGSMorex_rbca.fasta
ACGCCCTTGACGGGGTCGCGGATCTCGGCGGCCCACTTGCCCCACGGCCGGCGCCGGACG
CCCCGGTACTGCGACGGCTTCCTGCTCCGGCTAGGCGCCGCCTCCTCCTGCCGCAGCTGC
TTCTTGGGGGAAGCAGCGAAAACGAAGGGCTTGCTCTCGGCCACCTCCTCCTGCCGCTCC
ACCACGACCTCCTCCTCGTCGTCCTCCTCCTCGTTGAACTCCCGGAACGCCGCCTCGAAG
TCGTCGGCCGCGGCGGCAGCCTTGGCCTGCTTGGCCCCCTTGCCCGGCCAGATGTGGCCG
GGCGTGACGCGCCGCGCCGGCGCGCCCGGGATGAGCTCGGCGAGGATCGCTCCACCACAC
ATCCTCGCTCGCCTTTTCTTTCTCTTCTTTCGATGCTCTTTCTCCTAGCTCAGGTCGCTG
CTCTTGCTTTTCTTTTCTCTGGTAATTTGCTTTGCGTGTTGAGTTGAGTTGAGTTGGAGA
GCTGGGATGGGGCGGAGACGCTGTTAAGTAGGGGGAGAGGAATGGTGGCTCCCAAAATCG
CGGGAATGGAGGGAGGGTGGACGGGACGCGATAAGGCTGGCCGCGTCGACGTCCATGTCC
ATGGGCACAGCTCAGCAGCGGAGAGGTGCCCCGCATCTGCCGTCTTCCCACGCTCCTTCC
CGGCCCAAGACAGGGACCCGACCCAGCCCGGTTTCCCGGCTTCCCGATCCTTCGTGACCA
ACGACGCCGCGTGGCTTCGGCTGCGTGGCCGTGTGTGTGTGGTGTGGCCGCGCTTCGATG
GAGCTAGGGCGTTGGCACTGGGGAGACACAGGGAGGCCGCAGGGATGGCGCGTGCATCCC
CGGGCGAGGCCGGCGCGCGAAAACCAAACCAGACCTCTCTTGGGCGCGCCCCCGAGTTTG
TGGGAAAGGCTGTATTCTCAAGTGGCTGCACAAGTGGGGTCTATATTGTTTCCATCATTT
AAGCAAGTGCTTAAGCTTTGTACAGTGTAGTATACTGTTTTTCTTTTCTTGATAGGACCG
GAGGAGGCAAGGGCAATGTCGATACAGCTTTGTTTAAACAAAGATGTGGCCAAGGGTCAA
AGTTAGCAACTTGGTCTTTGCTACGGTTCAGAGTTTTCATCATCATAGGCATTATATCAT
GGTTAATATTGTAGCTGGTTGTTACTGTAAGGACATGTTCGATGGTAATCCGTAAAAAAA
ATTCTCGCATAAGGGGATCAGTCCATGGATACGGATGCAGAAAGATAACATCTAAGCATA
GAGCACACATTTTGACAATAACTTGAACAATCGAACGAAATTCGTGCAAACATGGCCAGA
TTTCGTGCAAACATCACCAATTTCATACAAACACGATGGATTTCATTAAATTTCAAACAT
CTAGCAAAAAAAAACCACCCCTAAACCTATCCTACGGCGACGACGCTCGGTGTCCAAACC
CGTGCCGTCTTCCATCCGCCATTTTCATGAGCACTACCGATAAGATCGACGAAGTGAAGG
TGCGGTCTTCCGCAAGGAAGAGTAGAACGAATGAGACGGGCTGGCCCACATGGGGACACC
AGGCCAAGCTGGCTCCCGTGCCCTACTCATCCTCGAAGGAGTCTGCGCCTTGTTCGTCAC
TGGTGGACGTGAGGCCCACGAGAGAAATGGTGGCGTCCTGGCTGTCGTCATCCCACCGGG
CTGCCTGATGGTTCGTCGGCGGCACGTAAGAGGCGCAACTAGCATTGTTCTCCTCCGCGA
CCGTCTACAACTGCGCCTCCGCGGCGACCGCTTCCTGGATTGAGCGCGGATGGCATCGTA
GATGCCACGCTACTCCGCGAAGAAGTTCGGGTTCGTCGGGGAGATGGCCGCTAGGCCCAC
CTGGTTCATGCGCTCGTCGTCGATCTAACCCAACATTAGTTGATTTTGCTCCAGCACCCG
CGCTAACGCCGGCGTAGGCACCGACGCAGGCTGCCCCTCCGCCATGGCGACGTTGTAGTG
CGCCTGCGCCATGGTGATACCGGCATGTATAGGACGCGGGGGAGTCCGGGCGAAGTCGTC
GGAGCTCATCTCCATCTTCGTGTCGTCTTCTTCATCGAAGACCTCACGCGAGCTAGCCGG
CAACCCGGGCTCGATCCGCCTGGCATGGCGGCTCTGCCAGGTGGCGGCAAGGGCGACCAC
CCTATTCTTCATCTCCAGCGACTAACTGTCCCATAGTGCTTTCCCGCTGGCGGTCATTTC
AGATATGGAGGAAAGGAGGAGGGTGTGGATTGTGGAGCGGATGTGTTTTGCTATGGAGAT
AGCTGGGTGTGACCGCCCTTAAATAGCGGATTACGGTGAGGCCACGCGTCAATGCGGGAC
GCTGGAGTGGGTTTCTCGGTAGGTGAGACTACTTAATGGCGGCATACAGACGGATGGATC
ATTGAACTAGTGTGGTGGATATATATCATATCTCGTCCAGTCATGTGTCTTCGGCATTGA
ACATGCGCGAACACGAGAGACGTGTATCGGGTTGCGCCCTCGGTCGGTGAGCCGCTTCAA
TGGCAACGGCAGTGCGAGGTCGCATTCGCTTTTCAATGGTGAGCGGACACTCTACGACAA
CATGAATGTGAGTGATGACCCACAAGTATAGGGGATCGCTCGTAGTCCTTTCAATAAGTA
AAAGTGTTGAACCCAACGAGGAGCATAAGGAAATGATAAGCAGTTATCAGCAAGGTATTC
T