| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_271706
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_43623 |
3 |
678 bp |
AK376183 |
Not available |
Available |
None |
CDS Structure of MLOC_43623
Contig Sequence (4060 bp)
>contig_271706 4060 assembly3_WGSMorex_rbca.fasta
TTTTTAACCTCATGGGCTTATTTTTGGGCCTATTNNNNNNNNNNNNNNNNNNNNATATAT
ATTAAAAAATCTAAAAATATGTATAAAAAATAAACGGGCCGTGCCGCGCCGGCCCGCGTA
TCCAGCCTCTAGGCCCAAACACGACCCGAGACGTGCCGCGTGCGAGTCGGGTTAAGTCGT
GCCGTGCCTGATCCATGACAGGCCGTGCCGGCGGGCTCGCGGGTCGGCCTGTTTAGCCCG
GCCCGTTTGGTCAGGGGCAAATCTGAACCCTGGCGTTCCAATCCCCGAACCCCAGTCTCG
CTCCCTGCCCAGCTCCTCCCACCCAGCCGCTGCCCGGGGCGGCAATCCGTCGAGCACCAG
CCGCGCGCTCTCCACTCCGCTGCTGCCGCGGCCGCTACCATCATGGCGTCCGCCGCGCGG
GCTCTGGGCGCGCTCCTCCACAGGGCCTCGTCTCTGTCCTCCTCCGCATCCGCTCTCAGA
AGCGCCTCCCTTCTCCACAGTAACCCGCCGACCCAAGCTCTGCTTCCCTCGTCCGATCCA
GTCCCCTCGAGTTCGGCCTTTCTGACCATGTTTTTGGGTGCCGTCAGGGAATGGCTCTGC
CTGTGGCGCCAGCTTGTTCCAGGGGCACGTGTCTAGGCGGAGGATTTGGACGTTCCAGCC
TCTCTGTATGGGGCGGCGCTCCTGCAAGATCGCCGGGAGGAAGGTGACCTGCTCTTGGCA
CGCTCTTTGCATCATGTCGCAGTAGTTCGGATTCAGGGCCAACTCGCTGTGCACATTTTG
CTTGTCTCTAGCTTCTACGGAAGTGGGTATACCGTGTGCGCCCGTGTTGTACTCTACAAA
AGAGTGTCATGTTTTAGTTTTCTCTGACTTAGCTCTAATGCTAATTGTCATGTTCATTGT
GCATTGCACAAGGACAGATTGACAGGAACAACATTCGATGCTTGCTAGCTAAATGTAGTT
ATCTTTTCTCACACAAAAAAGTGTAGTTATCTTTAGCCTCTTAATGCATATTCTTATACC
AGCTGTTTCTTTGGCTCAGGGTGCTCAGAATTTGAAAAAGATGAAGCGCAACAGCAAAAT
CGGAAAAGAAATCGTTGCTGCGTAGGTGTTGCAGTCCCTGTGAGCTTGTATTGCACTTTT
GCCTAAAAATACATTTGTCGTAGCCTATTTTTTTTTTCAATCCACGAATTTGCCTATATT
TTGCCAATATGTCTACTAATATGTCCTTATTGAGTAGCATAATGTGTTTTATTTGTGGAT
AACTTGTTAGGGCATATTGCCATTGTCTTCTGTGATTGGTCATTACCTCTATATTACCCA
TTGAATGTTATTAGCCCTTAAAGATTAGCTTTCATATCCTATCGACCCTAAAATCTTAAA
AGTATATTCGAAATGGCATGACAAGATCAGGCATTATAATATATTCAGTAAAATGCATCA
TAGGTCCTATAACTATTCAAGGTGTGTCACACTAGTCCTATAACCATCAAAGTACAGATT
TGGGTCCCAAAACTATTTTGATTGCCCGAATAGTGATTGTTGGCTGACGTGTCACCTGGA
CCAGCACCACAATGACCCAGGGCGCGTGGCGGTTGAGACATTTTGCAATTTGGTCCATTA
AATTCTTAGCTCTCTCCAGCCGGAGCCCTCCTCTCTGCAATCTCATCTGTCTTTCATCAG
TTCTGCTATCCGCTGCCGCTGCCATGTCTGGAACAAGCTTGACGGCAGCAAGATGCAGAA
GGAACAAGCCGGCGTGGCAAATGATCTAGCAAACCGGATGGTAATTGACTGAGAGAATTT
GTTTAGACAAATGACAAATGAATATATATATTTCACACCCTCTTCTGACATTACAAATGA
TAAATGAGACATGATCTGGGCAATCATAGAAGAGAGAAATGATGTTGCAACTTAACAGAC
AAATATATAGATGAGGATTGCCACAATTCCAGGAAGTAGCACAGCATATCATCATTACAT
AAAGAGTGCTCTTACACAAACATAGATACACACTAAAGCTTGCAACTATGTAATGTGGTA
CTGGGTTGCACTCTGCATGATGCAGTACCACATTACATAAGTAGTAACTCTGTCCAAAAT
AAAGCCTTCAATTGAGAAGGCCCTAGCCATCTCTATCTCTCCAAAATAAACCAAACCCTG
TCCAAAACGAAACCAAGTTCTGTACAATAGAAGGCATATCCACTTCATCTTCAATTTCTT
TTTCCTAGGAATAACATTCTTCTTCTCCCTGATCTTCTCCTTCCTTTTCTTCTTTGGCGG
TACATGGATTATACCTGTGGTCTGTTTTGTCATTGGCAGATCCTCTATTTGGCTTGCAAG
AAATTGATTGTCAGGAAGAGGTCTTGGTGCCTGGGATTCTTGGGATGGTTGTAACTGTAA
ATGGGAAAACATGTATTACATCAGCTTTGGTCTTTTGGAATAGGTGAGTTTCCATGAGAT
TAACAAAAGTTGAAAAGAACTTACAGATTGCATCAGTATGTCCAGCACAGACATGTTCTA
CTTGGCACTCGCACACTTGTATCACATTAGATCCAACCACACTTGCAGAAGATGTGGTCT
TTGATTCCAGAGTAGTTTTGGATTTAAGTTAGCAACTAACTGACTAGAAGTAACATAATA
GAAATTATCTAGTAATGGTTACCTGATCAGTTGAAATAATCCTTCTCTTCACTGGTAATT
TTGTCTTTTTTGCAATTTGCCTTGGAATTGAGTTTTGTCCTTGCCCTGCCTCTCGTTGCT
CCCCTTGCCTTGCCTCATCCTGCTGCTCCTGTCTACCTTTTTCAGGGCAAGTTCTTTTGT
ATCACCTGACCTACAAATACTGCAATGAGAAACTGCACCATGCTTGCTCAACTTTCCTTC
ATCAGTCTCTACAGGATTCTTCTTTCTTTTTTTGCTAGCCCTCCCAACATGCTTTTCATA
TAATGGTGGCAGGACTGGAGCAGCATTCATCTTTTCCCACTCTCCTGGGTCTCCAAGGCA
TAATAACTTCACCATATACTTTCTTGAATGCTGCAATACTATAGCATGGAGAGACAACAT
TCTCTGCTTTGATTCTTTCATCTCTGAGACAAGAGATGCCATGTCTACATGATATGCCTG
TTAGCTGCCAAGCTCTGCATGAACATGTGTATTTGTTTATGTCAACCTTGTACTCACCTC
TGAATCCCAAGATGCCTTTGCCAGAAGGCAATGCCTGGCAACTATTAGCCATTTCCGAAT
TTATCAAGTATCTTTCTGATCTTAGGACAAATTGTTCCAGACCATTCTTCACTTTCCTTG
TTCTTGCTATAAAACCTGGTCGACAATAGATTTTTGATTTTTTTGAACATGCTCATGACA
GGCAGCTCTCTAGCATCAAGTATCCACCTTCATTGATAAGAAACAAATCAGTTCATAATG
TAAATACAAACCACATATTAAAGATCTCACAATTATTAGAATGGAAAAGCAATAGGAAAC
TTAGGACCTGTCCGGATCCTCTCCGCTCCACAACAGCGGCTCCCGGAGTGGAGGGAGCGC
CAGGGTAATTTTAAGGAGTGGCTGAAACCGGGCTCCTTGTTTTCTCTCCGGCGCGGAGGG
AGTTTTGTGATGGGAGAGTTTCCAAACGGGTTCTTACTTATTAAAGACCTTACAATTATT
GTTTAGTAGCATGTCACACTTTGGTAATTCTAGGAAAAAAGCCCTGCACCAGGAACTTGG
TTCAATTGCTTCTAAGTACTCATAAGCTTCCAGATTTAATTCCTTCATGTCATCCATGTT
TTTTCTCCAGTCAATTTCATTGAAGGACCTTGCAATTGCCCATAACTTGTTCTTCAGGTT
CTTGCCCTTGCACTTCTTTGCAAAATTTTGATAAAGGTGCCTCCCACAAAACTGTGTTGT
GCATGAGGGAATAGAGCAGTAACGGCATTTATTAGTCCTTTTTGCCTATCACTCATCACT
GTCCAAGGTGCCGTGTTCACTATGTGCAGATTGTTAGAGTTATAATATAAGTCATGTACC
CTTTTGTATTTATCCCGATATATAAGGGGTTTCCTGCATA
