Contig Data
morexGenes
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Map Locations of contig_271630 (2674 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_271630

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43611 1 821 bp MLOC_43611.1 Available Available LOC_Os06g10440.1, FRAME:-2, EVALUE:1e-14, 13106.m01132 protein gb protein, putative, expressed
MLOC_43610 1 458 bp None Available Available None





CDS Structure of MLOC_43611






CDS Structure of MLOC_43610






Contig Sequence (2674 bp)

>contig_271630 2674 assembly3_WGSMorex_rbca.fasta
AACTCCTTGTCGGTGAGGCGGCGCCCGGGGCTGCCGCCGGGATGCGGCGACGGCGCCGGG
CTGCGGGGCGGGAAGCGGTGGAGGGAGCTCCTGCTGTGGAGGCTGCGGTGGAGGGACCAG
CGGCGGCAGGCGAGGGAGAAGGCGCGGTGGTCCGTCGTCAAGGCGCCGCCGGGGCTGCTC
GATCCGATCTTCCTGGAGCTCGAGGTCGATCTTGGTGATGATTGATTAACGAATGGTCTG
CACGGATTATATACGTATCAATAAGGGCACGATAGTTAGTGATTACTGATTAGTTCTTCT
GTATCATTTTCGCTGGCACTAAATTAACGTGGAAACTACTCCGTTATCAATATAAGAGTG
TTTAGATCACTCATTTAATGATTAAACGCTCTTACTTGCTTCGTAAATGGTGGAGACGCT
GTTTTTTTTTTTTAGAAATGGTGGAGACGCTGTTAAACTGAGCCATTTGCTTATGGTCGT
TCCTTTGGTTAATCCAAGTTCATTTGGTATAGTGGGCTATGGACTTGACTAAATTTTTCA
CAAAGATGTTTTCTTATCTGTCAATCAAAAGTTAAAACAAGCAGGCATCTTCTCTTAGCA
TACACACGGTGGTTAAAAGACACTTGATTGGAATATAGTGACGCGACCCAATGATGAAGA
TGACCCATCTTTCAGCAAAGGCCAGGAAGAAAAACTTATCATATCCCAATTTGAGTGCAC
GGTTCCCTAAAAGCAAAGCAATGCCAGTGTTGCCTTTCCTGTACTTATAATTCTTTTAAA
ATATAACAGTTTTATACTGAAATTGGCAGAATTCATGCCCGGTTCCACCAATGGTACATG
CATTGTAATACAAAAATTACCTTTTGAATTTGAATTCGTGAACAATAATTTCAGATAGCA
TTTTATCCAGACAGCAAAAGGAGCCAAGGAGTCCAACACAATTTGCTCTTAAACGTGACA
CTGGTAGCAATTAGCAAAGCTATAATAATTAATTATACTTATGGTAGAACAGGTTCGAGC
CTGAAACTCAGCAAAAAATATAAGACTGCTGCAACATGGAGAAGCAGGGAGTCCATATAT
ATACCATGTACATGGCATGTGCACCAGCAAACCCACTGCTAGCAGCTAATCAAGACTTCT
CCTCAGCAGCGCCAGATAAATGGGTCTTCTCGATGTGGCGTGTGATCTGTGAAACTGCAT
AGTGAGAGGCACTTGATGCAGCATAATAGGATGTCACAGTGAGCTGAGCAAACGTTGGGA
GCGCATATGCTGCAAGAAACCAAGTAGCAGATGATCAGGCATTATGTCTCAAAAATGCAA
TTCCTCTGACTACACGCTCCGGTGTATGGCTGGTAAGTCTTCAGGAGTATTTTTAGTTTT
CCATATAACATGCACAGGATAAGAAAGGAAACAACCATTCTTTGCTAACGTACCTAGCTA
ATGTTGGCAACATGCCTGGCAACATGTAGCTAAGTATACAAAAAGGACTTAAGAGGAGCT
TCAAAGCTTAGGAATAAGCCAAGATTTACCATAGGCTCTAATAGAATAGAATAGAAATAA
ATTTTAGAGGAGCTTCAGAGATTTGGAACAAGCCAAGATTTATCATAGGCTCTAATCTGC
CAACGTGCATATGACCCACTTTCCGTTGGAGATCAGGTCTAGTTAACATAAGAAATTTAA
TACTTGTAGAACTGGGAAGAACAGGATACAGGTTTTCTGTAACTTCGTCCAGCTGTCAAT
TTTTACATGGATAGGATAACAGAAATTGGCATGGTACACATGATACTTCAAGAACACTAA
AATAATTCTTTTTTTTAGTTACAACTAATTCGTTTCTATTGCACCTAAAATCTCTATTTG
CAACCTCACTACAGGATTTGCAAGTAAATGCTAGGCTGAGAAGTACTAAACAAAAAAAGA
TGGTGGATCACACTATTTCTTATGGTCACTTTCTCTGTGAACCCGTAACAAATGCGTACA
GGGAATGGATATTCACAATGATTACCAATGCATAAACAAAACAAGAAGAAAAGGAACATA
TTTCATGTCTCCGCTATAATATGCAAATTTCTATACAAGGGGATATTTGGTGTGAATGCT
AATTTCAAGAACCTTTTTAGATATAAGAAAATGATTATTTAACTTCAATGGAAAAACGTA
CCCCCAAATAAAGCACTGGCACCAGAGAATAAGATCAAAGGAGGAACCTGCACAAATAAA
ATATCATCCCCAATTAAATGAACATGTAACAACAATGTGAACTTAACAGTTACAGAAACT
GCTACTAGTGCCAAACATCAAGCAGATAAATGAAAATCCATTGCCAGTTGCACTGACAAC
ACATGATAAAAAAGCTCCAAGGCAAGTAATTAACACTAGTACAAATACCCGTGCGTTGCA
CCGGCTAAAAAAAAGAACACAACATGCTTCATGTGTCATTATGCATTATTTTTTATATCC
AGGAGCAAAAGAATATGTTCATTGTAATGGGGGACGCCCGTGCTTTGTTTCAGAGAAACA
CAAAGACTCCTAGTCCTCCACATGCGTCAGCAGATCGGGCAGACCGGAAATTGCAAGTTC
CTCCTCGTCCCTTAAAATCGTGATTTCCTCCTCATCCCTTGGAACGCCTTGCCGGTGTAT
CATCTACACACCATGGATCGTCGGTCGTGGTTGG