morexGenes - Barley RNA-seq Database

Contig contig_271511

Source Contig contig_271511

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_271511 (2616 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_271511

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43591	2	929 bp	AK361353	Available	Available	None

CDS Structure of MLOC_43591

Contig Sequence (2616 bp)

>contig_271511 2616 assembly3_WGSMorex_rbca.fasta
CGAGAGGCCCCCCCCCGCCCCCCCCCCCCCCGCCGAGATAGCCGCGGCCGCGGCGGGCGC
CGGCTGCGCCGCAGTGGACGCCCCCGTGTCAGGCGGCGACCGGGGCGCCCGCAACGCATG
CCTCTCGATCTTCGCCGGCGGCGACGCGGCCGTGGTGGCCCGCCTGGCGCCCCTCTTCAA
GCTGATGGGCAACGCCCTGTACATGGGCGGGCCGGGCGCGGGGCAGCGCGCGAAGCTGGG
CAACCAGATCGCCATCGCGTCCACCATGGTGGGGCTGGTGGAGGGCATGGTGTACGCGCA
CAAGGCCGGGCTGGACGTGGGCAAGTGGCTGGAGGCCATCTCCACGGGCGCCGCGGGGTC
CAAGTCGCTGGACCTGTACGGGAAGCGGATGCTGGAGCGCGACATGGCGGCTGGGTTCTA
CGTCCGGCACTTCGTCAAGGACCTCGGGATCTGCCTGTCCGAGTGCCAGACCATGGGGCT
GGCGCTGCCGGGGCTCGCGCTCGCGCACCAGCTCTACGTGTCGCTGCTTGCCCACGGTGA
GGGCGGGCTCGGCACGCAGGCGCTGATACTGGCCGTCGAGCGGCTCAACAACACTTGCCT
TGACAAGAAAGGCGAGTGAAAGCCTACGAGAGTTTGGTTGATGCAACATGAGAGAGTTGT
TCCCCCGTGTATATGGGACTTGTTGCATGCTGTCTGTTCACGCTTCACAGTGCTCAAATA
TTCAAATAAGATTGCAAAAATGGAGTTTTTCAGTTGCATCGACAGTAAATTCGACTGTTT
GGCAAATCAGCCTGTTCTGAATGTCGATCCACTTGGCAGTGAAACTAGAATATTCAACGA
GCTCGCCCTTTGTTAACGGGTCATATTTGCCGCAATGTGTTTTTCTTGCTTCAGATGACG
TCCCTACGTGTTTGTTTCAGCCTTGGCCAGCAGATTCTCAGGAAAAATCAGAAATCAAAC
AAACAACTACTTCCTCTGTCCCAAAATAACTGTCTCAAGCTTAGTATAACTTTATACTAA
AGCTAGTATAAAGTTGAGACACTTATTTTAAGACGGAGGGAGTATTTGGAATCAGCTTTG
CCAATGAAGCTGAATCTGGATTCAGATCATTTTCAATGCAATTGGCTGAAACACGTCCAG
GTATACTTGAAGCAAATCCATAGATGATTCCATGCCAACTGAAGCTGAAACAAACGGGGC
CTGATGACGTTTCTGCTGCACAAGTAATAGGTTGCACCTCTGTCCCAAAAAAGCGTCGTA
AATTTATAACTAAATTAATACAAATTTTATACTAAATCAGTGTCATTCATTTTGAAATGG
AAGAAGTATATTGAAGTGTTGGCTTATTGACTTCGGAAGAAACGTGCATGCCCTGAAGAT
ACATGCACAACAGAGCAGAACCCATCCGAGCCAGTGAAGCAAAATAGTCCAAGTATACTT
GAAGCGAATCCAGGGATCGAATCCATGGATGAATCCATGGTTTATTGACTTTGGAATCAG
CTTTGCCAATGAAGCGAATCTGGATTCAGATCATTTTCAGTGCAATTGGCTGAAACATGT
CCAAGTATACTTGAAGTGAGTCCATGGATGATTCCACGCCAACGGAGGGTGAAACAAACA
GGGCCCGATGCCGTAAACAATGGCGCTTGTGCTGCACAAGTACTCCCTCCGTTTCTAAAC
ATAAGTTTTTTAGACATTTCATTAAGGGCTATATACGGATGTATATAGACACATTTTAGA
GTATGGATTCATTTATTTTACTTTGTATGTAGTTCATTTAGATCATCTCCAACAGCCGCA
CAAAAAATCAGCGCTCAATAAAAGTTATAATGCGCCACTGTAGCACTTTTAATGTGTCGG
GACCAACATTGCTTTAGCAGACGTCTAAAAATGCACGTCCAAAAAAGTACACGCATCACT
CAATATAAGCTATAGAAACACTAAAACAAGCAAACTATGCATGCAAAACAGAATCTGTTA
AAAACCAAACAGTCTATGAAGATTTGAACACCATACTTATTTGACTCTAAAACTTCTGAA
AAATTAGGACAGAGCATAGAATTTGCATATAAAAACTGTGTAAAAATTTCAGAATTTTTT
GACTTTCCAGTAAAATCACATAATTCATATACTGAAGGCAAAAGTTTCTGTTTTTGCACA
CATTCGAACCAACAAGTTTCCACACTATCCGAAAGTCTTTATTTGGCACTTCATTGAAAT
AAAATACATAAAACGTGATTAATAAAGTATATTAATCATGTGAACACACAAGAATAGAAT
GTAAAAGTGTTGGGTTGTCTCCCAACAAGCGTTTTTTTAAAAGCCTTTTTAGTTAGGCAT
GATGATTTCAATGATGCTCACATAAAAATATTGAATTGGAACACAATGGGAGCATCATGA
AGCATATGACAAGCACATTTAAGTCTAACCCTCTNNCTATGCATAGGTATTTTGTGAGCA
ATCAATTTTTGGAAGGCAAAACAAGCACATCTTCAAGATTTTCAACACATAGTGAGGAAA
CTTGATATTATTGCAATTCCTACAAGGATATGTTCCTCCCTCATAATAATTTTTAATAGC
ATCATGAAGGAATTCAACAATATAACTATCACAGAA