Contig Data
morexGenes
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Map Locations of contig_271459 (4540 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_271459

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43580 3 1431 bp MLOC_43580.1 Available Available LOC_Os10g10190.1, FRAME:+1, EVALUE:1e-26, 13110.m00915 protein ATP-binding region, ATPase-like domain containing protein, expressed
MLOC_43581 1 807 bp AK356167 Not available Available None





CDS Structure of MLOC_43580






CDS Structure of MLOC_43581






Contig Sequence (4540 bp)

>contig_271459 4540 assembly3_WGSMorex_rbca.fasta
CAGCGGCGGCGAAGGCGGCCATCGCGTGGGCCCCGAGAGGGAGCGGGAGCAGGGCGGAGC
GTTGGCGGCTGGTGGACAGCGAGGCTAGGCTAGGCGCGGGGGGCAGGGGCGGAGCGGGAG
CGGAGCGGAGCTTCAGGAAGTTTAAGTGAGAAATAATTCTTATTTGAAATGTGTTTCTCT
GTTTAGCTTTTCTTGAACTAAAATGTCTTTGTGTGCAACTAATTAATGGTGTACAAGTAC
AATACTGAATAAAAATCCTGTGATGCCCTGTTACCCTGTCAGGGCAAAGCTGCCGGTCTG
CTTGTCAAAAGAAAGGGCAAGCACACGTCACTTAATTTTTCTGACCAAAATAAGCTTGTT
CAAATTGTTTTAGATCATTTATTTAGAGTTATTTGTACATGAAGAAGGTAAATCCTGTGG
TGGAAATATAGAGAAGTTATTTTATAGCTAGGTTCTGATGATCTTGTGAAGTATTTGGTG
GTATGCAGATCTTGTCTTCACTTACTCGCTTAACATATGATGACCAGAGCACCCTAACTT
TTTGTGTGTGTTTCTGAATACGAGAATCCACTCAGCTTATAAATGTCGTTATTGTATACT
TTATTCATGCTTGTCCTATTTTATTTTATCCAGGTTCTGGTTTGCAATTTTCTGGCCGAG
CACAAGAAAAAAGTACAAATTCAGCAGGCTTGGAAGAGGTTTGCACCTTTTAGTCTTTCA
ATTCGGTCATGTTCTAATTTTACTTGTTTTCCTTTCTTGGACCCCAGTGTAGCACTTGTT
GACGATAGCAGTGCTATCCGTGTCCCCACTCTTTTCATAAGTTCCCGAGTCACTGCTCCC
TTGATGTTAATTTTTGCTGTAATGCAAAGGCTTATATAATGTGCACAGCCATTGGCTATG
TTTGGCACTAGATGAGAGCGTTTACACTTTGTGGTTTTGCATGATGGCTAATATAATGTT
AAATTCCTGTGTTATGCTACAATTGATTACTCTTTTGGCATGCACGTATCTGATCACTAC
TATTTTTATTATCATTTGTGGCATTTAGGATCTAGTCAATATTGCCTCTGATGGTGAACT
TGATCCGAATGTCATTGAGAAGCTGAGTGATGAAAACATTTCTCTGTTCACAAGGTAATT
TCTTGATGATGGCTGATCAGTTTACTTACATGGGAGAATTTCAGCATGATATTGTCATCA
TATATACAGTCACAAGAGTTCTCCAACAATAGCCATATAGAACTATAATCCTGAATAGAT
TTTGCAATTATATGTGTTTTAAAATTCCTGTTTTGTTGTCAACATAGTGTTGCTGTTTGT
TTGTTATGTCTTCTTTTCTATATTTTGCATAAATCTAATTGCGCCATTTTTGTCTTCTCT
AAAATTCAGTTGATTAGGCCTTATAAATCATCCTTCCTTTTGGTTTCCCATTTTTTTCTA
AGGAAGACTTTGGGTATCCTTTCTTCTCTGAGGTTGTTTTCCTGCCTTGGTGGAACATTT
GTCTCATTAGAAATGGTACATTTTTAGACAAGAGAGGCCTACCTTTGCTAGGCTAATTGC
ACCAATACAGATACGTGTATCAGTATCAGGGTGATACGGATATGTAAATACGTCATTTCC
AAAGCGCCAATAAGGATATGCTTGACTATTTTTTGAAAATAATAATAATAATTATTGTTA
TCAATTAAGTAGCAAGCCTTTTACCATCTACAAGGCCGCATCATATTTTTATTTCTAACT
TTGACCATTAACTTTACCAACAAAAAGTGAATTATATACCATAAAAAACATTTCATTGGA
TGCACATTCCAAAGAACTTTCCGATGTTATCTTTTTTATGACATTTAGTTCATATTTTAT
TGACCAAAATTATAAGTCAAAGTTTAACACGAAAAACGAAGTGGCCTTGTATACAAAAAT
GAAGGGAATATTTATTCTGGGCAGCGCAGTCCATTATCTTACAGTAACTTTTATTCATGA
TTCCAACAAAAGCCAAGAACTAACAGCCAAATGGTAGCAGCAAGTTGGAAAACATAAAAG
TTCAGTTAGAGAAAAAGGGAGGAGGAAACCAGCAGCAGCCTATCAGTAGATAAAAATCTA
TAGGATAGTAATTAATCAGTATCCAATACAGATATGCTGATTGCTGAGACTATCCTGTAT
ATTAGCATACATTACAAAATTAATGTTAACAATATTACATGAGTTGCATATCTAGGGAGA
TCACAAACTTCCACTGCAGAATATTTTATTTTGAAGCTACTAAATTGGCTGGTTGTTGCT
ACACTTAGTTTGCTACTCCCTCCGTCCCATAATGTAAGACGATTTTTTATACTAGTGATG
TCACAGAACATCTTACATTATGGGATGGAGGGAGTACGTGTGAGGTAATTAGTGCTACCT
CGAAATGTGGTGACATTCTTTTTGAGTGCCACGAGCCAAGCTACTATAGCTCTTAAATGA
ATAGTTTATGCACGACGCCTTAGCATGTAGTTGTATTGATAAGATTGGTGATTGTGTGTG
TTGTGTGATATCACTCTTTCAGGCGTGAGGAGCTTAAACAACGAGATACACAATTGAAGC
AGACGGTATGTCATACCATTCAAAGTAATCAGCTACTAGCTAGCGTATTATGTTGGTAGA
TCAAATCAGAATTGTTCTTTTGTAGATTTTGGAGTTGGAGCATGAACTAGAGGAAACAAA
AAGGAAATGCTCTCAGCTTTCTACTGAGCTGCAGGTGCGGAAGAGCCAGCAGCAGCTCCC
ATACATGTGAAGGTTGGTTTGGCTACTTCTGACGTATTCTTCTCTGCAAGTTATTTCCAA
TTCATCTATACCTTTGTTAATTTCACAAATATAAATATAGTAAAACGCCATGCAATAAAT
TGATCTTTATTACTCCCTTATCCTATTACTTCCTTCCTTACAAAATAGTTTACGCATTTG
ACATTACCCAATCTTCAATATGCAACTTTGACCATTTGTTTTTGTATGAGTATGCAAGTC
AAGGATTGAACAAAACTTGTGAGAATATTTTTCATGAAAAAAAGAATCGCTGTCAGAATT
TGCTTCTGACCAGCCTAAATGGTTTCAAATCATTATTTGTAAATGATAATAATTAATAAA
TAAGTTTTACTGCAGACTTTCTAAAGTGTCATCTATTTTGGAACAGAGTTAAAACTTTAA
TCACCTGCCATGATCTGTCCTGGTTGAGCCTTGAGAGTCCAGCTCTGTGTTGTAGTTTCC
AACCCGACGCTACTACCTACATGCAGGGTGGACTAGAATTGCTTTTATAAGTACCTGATT
CTTTCTTTTTCTGCAAATCCTAAACGGACAGGAGTTCTGGCAATTCATTGAGCAGAAAAG
AGTTATCCAGTTTATAAAGGGACTAGCCAAACAAATCGTATGCTGCTAGCAACCCACCTG
TGTTGCACTTCTTTCTACCATTGTCGTTGATGGTGGTCACCTTGTCCACCAATTCATGAC
AAACATGGTCAATCTTGAGACGATGAGCTTGATCAGCTTCAGAAAGAAGATGATGAGCTT
GATCAGCTTCAGAAAGAAGATGATGTTGGAGCACCAGAGCTCAAAGTTGGATATTGCTCG
ACCCAACTAACAAATGTAAGGTCTTTATCAGCAGTTGTAAAGAGTGCAATAATTAACAGA
TGGTTGCGTGTGATATAGAGGTCGAAGATGTTATTCCTCTTTTCAAGAAAAAATAAACAC
TTGGGTCATCTGCCAAAGCGGCCACCAAGAGCATGAAACGAGCCGACAAAGAATATCCAC
ACAAATGAACATTAATGCCACACTATCACGTCAAAGGTCTTGAAGAAATGCACGCATTGG
TCTACAAATACGGATGGAGATAAAAAAACAAGGTCTTGAAGAATGCACATGTTAATCTAC
AAATACGGATGGAGATAAAAAAAAAGGTCTTGAAGAATGCACATATTAATCTACAAATAC
AGATGGAGATAAATTTTTTTTTCGAGAAAACGCAGAGATATGCGTTTCTTTGTATTGAAA
AGAGGGAAAGTTAGCCTCCGAGGAGACGATTACAGCAGGTTACAAGTAGTTCAATGGACA
TCCCAGGATGGGGGAAAGACTACCCTAAGCCCCTTGTCCCCGGCTCTAGCCCAACACCTC
ATCTCATCTTTGATCCTATCGGAGAGCTCGGAGAGCGACGGAGTGACATGATCAAATACA
CACGCATTCCTATGTTTCCAGATCATCCATGGAACTAGCAGCGTGGTGGACCTCAGCGCC
TTGCGGAGCGATGGTGGTGTGGCATCTCTCGCCCTTATCCACCAATCCTAAATGGAGATA
TCCTGCTCCGGCGTGGGGGCTGGTAGGCGCAGCCAGGAAAGAGCCTCGTGCCAGGTTTGC
CGCGCGAAGGGGCAGGCTGGTAGCAGGTGCCGGATGGTCTCCGGTTCTTGGTCGCAAAGC
AGGCAACGGGCGTGATGGGGGAGGCCACGGCGAGCAAGTCTGTCCGCGGTCCAGCATCGG
TCCAGGTTCACAAGCCAGTGGAAGAACTTGACCTTCGGCG