Map Locations of contig_270723 (3728 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_270723

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43486 3 1947 bp MLOC_43486.2 Available Available LOC_Os02g38200.1, FRAME:+1, EVALUE:0.0, 13102.m04201 protein dehydrogenase, putative, expressed





CDS Structure of MLOC_43486






Contig Sequence (3728 bp)

>contig_270723 3728 assembly3_WGSMorex_rbca.fasta
CCCCCTGCCCCCCCCCCCCCCGCCGGTCCGCATCCCCCCCCCCCCCCGCCGCAGCCCCAG
CCTGCCACCCATGGCGCGGCGATCCGCACCGCTCCTCCGCCGCCTGGTCGCCTCCGCGCC
GTCCCTCCCTGGCCACGGCGGCGGCGCGCGCCGCACGGTGACCTACATGCCCCGGCCGGG
CGACGGCACCCCGCGCCCCGTCACGCTCATCCCGGGCGACGGCATCGGGCCCCTCGTCAC
AGGCGCCGTGGAGCAGGTCATGGAGGCCATGCACGCGCCCGTCTACTTCGAGACATACGA
CGTCCACGGCGACATGCCCGCCGTGCCGCCCGCGGTCATCGAGTCCATCCGCCGCAACAA
GGTCTGCCTCAAGGGCGGCCTCGCCACCCCCGTCGGCGGGGGCGTCTCCTCCCTCAACAT
GCAGCTCCGCAAGGAGCTCGACCTCTTCGCCTCCCTCGTCAACTGCGCCAACGTCCCCGG
CCTGCCCACCAGGCACAAGAACGTCGACATCGTCGTCATCAGGGAGAACACCGAGGGCGA
GTACTCGGGCCTCGAGCACGAGGTCGTCCCGGGGGTCGTCGAGAGCCTCAAGGTATGCCT
GATCGTTCGCTCCCTGTTGTTTGTTTGGAAAATTCACCTCCAGTCCTTCACCTGTTCATT
GGTTGACGTCTGGTGTGCCCTTTTTTTTTGTCGTTGGCTCTATTGCTGGTACATGGTATA
TGATCGGTGGATTTGGCATATCATAGTTAGTTAGTATACATGGTCAAGAGGAAGGTTTTC
CGTTGCAAAGTTGCCACTGTCAGAGTAGATATATGATTTGTCTGTCATGAACTGATGCTG
TCAGCCGGTTATCTACCACGATCCGTGTAAAACTGAGTTATCTGAATTTGTGACCAGGAT
GATGTAGATTACTAAGATGCTGTTAGAAATGAATGTACTGTTTGCTTGATAGTTTATATG
ATCATTGCAGTCATTCATGCCTCATAAGGTTGAAATTGCTGGTAGATCCGTGTAATAAAA
CTGTCAAATGCGGACTGCAAATCCTCAGTCTCGTTCTGGCAAGAATTGTGCTCCAGTGAT
TCACATGTGCTCCGGTTGTCCAAACTTGTGGTGTAGCTTAGCAGGTTTGTAGAAACCAAT
TTATCTGAACTATTGGGTCGGTGTTAACCAGGTAAATGATGGCGGTATTGTCTGTATTTG
AGTAATTTCCTTGTTTACTGAGAAGTTGTAATATTCATTTAACATTATGCATTTGCGCTT
GACTGGGCTTCAAAACTCATTTCCGAATTTATGAATGGAGTAATCAGTACAAAACTCTGT
AGGCCTTATCTAGAATACACTGTCGTTATGTTGGTCAAACCATGATGTGACTGCCGTGAG
GTTGGTATCTGGATGTATTTATCCCAGGAGATAATAGCCAATAGGTACTCCCGTCCCAAA
TACACAGATGGGTGAACTTGGCGTCTATTGACCTATAGATTCATGTGCGTATGCTATATC
AACAGAACATGAATATCATGAGGTTAGATTGGTTTCCATTATTTGCAAATAGACCAAGAT
ACGCAAAAAATGTGCCCTGTCTATGTTCAGAATATTCATCATATATGTGCTTATTTTCTT
GCATTTATGTTTCCATGCAAGCCAATTATCAGTCCTGTCTTAGATGATGTGAGTTTGCTC
AAAACATTATCTATGAAAACAATTGCTCGACTTGTGCTTTCCTTTTAAGTCTGTTTTGTT
GCCTTTTTGTTACTCTTACTGATTGGGTTTAGGTGATCACGAAGTTTTGCTCTGAGAGGA
TTGCCAAATATGCCTTCGAGTATGCTTACCTTAACTACCGGAAGAAAGTCACAGCAGTGC
ATAAAGCAAACATCATGAAACTTGCTGATGGTTTGTTCTTGGAGTCTTGCCGTGAGATTG
CCGCTAAATATCCAAGTATTGAGTATAACGAAATCATTGTTGACAACTGCTGCATGCAAC
TTGTTTCAAGGCCTGAGCAATTTGATGTTATGGTATGTATCTTATTATCCTGGTATTCTC
AGATGCTCCTATTAAGTAAACCATTCCTTGGGGTTACTGCAGATTTTCTAACTTCTATCT
TTCCATTCTTTTGATAGGTTACGCCTAACCTTTACGGCAATTTGGTTGCCAACACAGCTG
CAGGTCTTGTTGGAGGAACAGGTGTCATGCCAGGAGGTAAGATGAAATCTTACTTTGTTT
CCATGGTCAGTTCATACTATGAGTGGTTAATTGGATTAACTTGGTCGATTGCGAGAAATG
CTGGTCAACACTTACTTCCTGGTATTCTTGAATTCTTTGCTGGGGGCCCACTAGTGCGAC
ATGCCTAGTGTGTTGTAGTGGCACATGATTTTGACCCTCTTCCGCTCTTTTGGAACAAAT
TAATAAAATTTAACTTAACACCTCCTTTTTTTGCTATATGAACTACATATAGGTTTATTC
TTGTAAGCCAACATAAGTTTGAGGTTTATATTGATCCATGGATGCTGTGTTTATGTTGCA
GGTAATGTGGGTCAGGATCATGCCATCTTCGAGCAAGGTGCTTCTGCAGGAAATGTGGGA
AACGACAATCTTGTAGAGCAGCAGAAAGCAAACCCTGTCGCCCTGCTCCTGTCGTCCGCG
ATGATGTTGAGGCATTTGCAGTTCCCGTCATTCGCTGACCGTCTGGAAACTGCGGTGAAG
CGCGTCGTTGCAGAAGGCCAGTACAGAACAAAGGATCTAGGCGGCACCAGCACCACCCAG
GAAGTTACTGATGCAGTGATCGCTAATCTGGATTAGATACCTGATGCACCGCTGAAGGAT
CGATTCTTTTGGAGGACTGGTTTAAAAGTCCCAACTTCTGAGTGTTATTTTTTTCGTACA
GTGTTAGATCGTCAATTCTGTTTCAGAAATAATTGAGGAATCCACGAGAATTATTATTCT
CACGAGACTTTGTAGCAAGGCAAACCACCTTGTGTTGCAGAGAGAATAGCTGGCTACCTT
AAATTTAATTGCAGAGAGAATAGCTGGCTACCTTAAATTTAAACCACATGCATTGGAAGT
TTATTTTCAGTTCTAATTCATGGTTATCACTCCCATGGAATTGGAATCCGTTCCCCTCTT
TTTTCTGGATTGGAAAGGGAATCTTTTCTTCTGAATTGATATGCATGCCACTATCAGATT
GTGCATGTTACTCCAGCTATAGCTCCCAAATCCTGTCCCCTATTACTTTCTCCTCCATAT
ATTATACACAAATTATATACACTAGTAGCTCCCAAATCCTGTCCCCTATTACTTTCTCCT
CCATATATTATACACAAATTATATACACTAGTTGAATGTCCGTGTGTTGTCACGCATATG
ATTTTCATTCAGATAGCAATACGTAACGGCTCTGTCCCACCTCTTTCCTCCTAGGCTGTC
ATTGTCTCCTCAATCACTCCCTCCTTCGAAGAAGATATGGAGTTAGGGCATCTATAGACT
ATAGTCTGTCTTCTTAAATTTAGTTAGGGCATCTATAGACTATAGTCTGTCTTCTTAAAT
TTAGCTCCTCAAATGCCTTCGTCCGGTCCATGCACGGGCGTGTCGTTTCTAAATATAAGT
CTTTTTAGAGATTTCACTAGTAGACTACATTCGGATGTATATAGACATATTTTAGAATAT
AGATTCACTCCTTTTGCTCCGTATGTAGTCCCCTAGTGAAATCTTTAACAAGACTTATAT
TTAGGAAC