Contig Data
morexGenes
Links



Map Locations of contig_270280 (5352 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_270280

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43431 1 1022 bp MLOC_43431.1 Available Available None
MLOC_43430 2 484 bp MLOC_43430.2 Available Available LOC_Os04g54240.1, FRAME:+2, EVALUE:3e-38, 13104.m05607 protein wound induced protein, putative, expressed





CDS Structure of MLOC_43431






CDS Structure of MLOC_43430






Contig Sequence (5352 bp)

>contig_270280 5352 assembly3_WGSMorex_rbca.fasta
CTCTAAATTTATACAAAATGTGTTAAAATTTGCCCCCACTCAATAAAGTTTCTAGGTCCG
CCCCTGGCGCCAGCCCCAAGATCCGAGCGAAGGGGAGGAAGCCCGCCGCTGCCGACGACA
CCAGGGCTTCGCCCGGCGACACGTGCCGATGGCGACGGGGAAGGGGGCCGAAGGAAGGGT
GGAGGAAGCCGACGGTTAGTGTTCGTCCTCTCGGTCGCCCGCGGGCCCGCGGGGGCGATG
CGAGACGAGATGATGTGAGAGTACCTTACTCTATATTACAATGGAGAGAGGAGTTTCCTA
GATTTGCGCAAGTAAATGAAATGGACTTTCTGCTAATAAAATACATGAAATGACTTTTTA
TTAAGAGGAAAGGCCTTTCTGCGAATAAAATAAATGAAGTTCACACGGCCCCCGGTATGC
TGGTAACCATGTTCTCCAGCATGCGTCATTCCTGTCCTATCTCTGCCTTGTCTCATTGTG
ACGGACAAAACCACGACCCACTTAAAGCGAGAGGTGCGGCGTAGGTAAGGTGCTGCACTG
GTGCACCCAGTATCCTGGATAACCAGCGCGGCTGTTTTGCTCCGGCTGTCCCGTATATAA
CTCACTCTTCGTCTCATCAACTCAAACAAGCTAGCATCAGTTCTGGCAGTGAGACAGTTC
AAGAAAACCATCTCTATTTCGCAGTATCGCAACTTTGCAAGTTCGGTAATACTAGAGTAC
TACTACACAGCGATCACAAATCAGCCTCCTCTGTCCAGCAACGCGGCAAGAGCAACAAGG
AGAAGAGATGGCTGGTCCGACCAAGACATCGTGGATGATGGCGATGAGTGTCGGCGCCGT
GGAGGCGCTCAAGGACCAGGCCGGGCTCTGCCGCTGGAACTACGCTCTCAGGTCCATCCA
CCGGACAGCCAAGTCCAAGGCTAATAACGTCCATGGCGGCGTCTCGCAGGGCGCGAAGCA
ACTTCCGGCTTCTGCGGCATCGGTGCCGGAGAGGCGACCAGCACACGACGAGGAGGGGTT
GAGGACGGTGATGTATCTCAGTTGTTGGGGGCCAAATTAAGAGTACTAGTAGCTCGGGCT
TAGGGGCACGGTGCTTGTGTTCGTTGCAGCAAGAGTAGGCTATTACGCATACATGGCCGG
AACCTGGCTAGTTGTCCCCTCATCGATTGTAAAGATACCACGACTATGATGATGAAAATT
TTGGCTACGAGTTTATATCATACTCCTTGTTCATGTTCTTGTTTGGAAGGCTAAAGGCCA
ATGTTTGCCTTGAGAGGAAGAAGGTTCAGAGTTGTTCGGGGAGAGCAACTCAGCATAGTG
AGTTGAGAAGCATACAAAAAGTAGAGCAGGTTCAACCGCCTGTACAATACTGTACAACCA
ACTCTACGGAATGGAATAAATAAAGATAGAACAAATCTCAGCGCTTCACCGTCCGACTGC
CGTCCAAGATCACCGTCTTCTCTGATCCATCCGAACACCTCCAGGTCGCTGCAACGGTGG
CTATCTCTATCAGAGATTATGGCACCACGTTCTTTTCAACATTGTCTTCTCTGATTGTTT
TGATGGGGAACAACATGTATATGCTTTGCATTTGTTGCAAGTACTTTCTGTTGCGCGAGT
CAACCTGACTCACAACAAGCGGAAGGTTCAAGGGATAGGGACAGTTGCCAGTAAGGCAGA
GTCGTTCATTCTCTAAAAATCTGATTTATGATCAGAGCGAGTGCGATTACATAGTGAACG
ACATCGCAACCCCTTTCCATTTTCTACCGAACATCATCTATTTTGATTTTGGCCGAGGTC
CATGGAAGCAAAAATGACTTTGTAACAAGAAGTACTTACTAGTACACACGAGTTCCTTTC
AAGCAATTAAGTACATCAATGATATCGTAATGATTACTTTTCCCATAAAGAACTGTGCTC
CACATATCTGTGCTGAGATAATTGATAAGGCATGATGTCAAAAAGGAGATATTTGATAGG
CACATATATTATAGAACTCTTATCAATATATTTGAAGACACTACTAAATGAAACACATAA
CACAACTATGCATCTAAATAGCGTAAAAAATAGTCTATATATTAATGTTATTTTTTATTT
TCTTGGATATAGATGAAATTTAAATTAACGAAACGTCATGAGTAAATTTTAAAAATAACA
TAAGTTTTGCACAATACTGATTCAGTTTACAGTTGTAATAATTTTAATGTGTAAATTTTG
AAATGTAAAATAATTAATTTTAAGTTAATATTAATAGTTTAATGTTTGAAATTGTTTCGC
AAAAACTGTATTTATTAAAGAAAAATTTATTTATAGCGAATATTATATGTAAAATTAAAA
ATATTTAGTATAAATGGATGACGGGCAGTACTACTACCTAACTTATATTTTTATTATTAT
TAAAATGTTACAAACTTCTACCTCTCAAGCCACTTCTCGTACAGTTTGAGATAACACTCC
ATCATACGAGGGTCGTTGGTGTAGATGACATCAATTCAGATGGTGCCATGGGTAACAATA
CTGAAGCTCTCCGTCGTTGTCTTGTGGTTATCCGCCGAGGCAACGTAGCCCGGCGGGTGA
CGACACCGCTGGCCATTGGGGTTGAGAAAATAGATTCCTTTCGGCATGGAGGACGAAGAA
AAAAACAGACGGATAAGAAGAAAAAGAGAGATCGAAAATTGAAAAAGAGACATCTCAAAC
GGGGGAAAAGAGACGCCTCAACTGCGGTCGCCTCGATTTTAGTTTTTTTGTTATGACTGC
AGTGCGCATAAATAAAGACTTCGCCAGAAAAACTGATGAGACAATTTAACTAATGGGCCG
CTTCGACTGCATCGCGCACAAATAAAGATTTAACTCCCTATTGGAGAATTCAAGTCAAGT
CAAAAAGATCATTTATTACAGTTGGAGCATGCAAGTCAAAAAAGTCATTTATTTCAGATA
CTGGTGATTGTCCAGCGGCTTGTTCAAATGAAAAAAAGAACCACAAATGACGAGGAACAA
AAGTAATTCAGTAGCAACAACACAGAAGCAGCAACAGGAAATCTAAAGAATCGGAAATAA
GCTCGGCAGAGCTTAGTTTATAACACAAAAAAGTTCTTAACATAGATCTCCTCCAGAGAA
GGAAGAGGCAGCAGCAATAGGAAATCTAGAGAAACGGAAATAAGTTCGCCAGAGTCTTAG
TTTACAACATAAGAAAATTCATAACATAGATCTCCTCGAAAGAAGAAAGAGGCAGTAGCA
GGAAGAGGAACCAACAGCACGACGAGGCACCAGCAGCAGGAAGAGCAAGAGGCACCAGCA
GCAGGAAGAGGCCCCTGGAAGACATTACATGCTTGGAGGTGCTCGATTCTTCCGTGCCGA
CAAAATGAGAAACAAATTGTTCATATCAACAAGTCAGTGAGGAAATTATAGGCTTCATGT
TGTATTCTCCAAAACATGCCTTACCGCCAAATAGGAAACGAGGAAATTGTTGCGGTCCGT
GAAGCTCTCCAATTGGAAAAAAGGGATCCAGAACATCGGCGAACCGCAATGCCTTTGAAT
AGTTTGTAACAACCACGCCTTTGATTCCATTAGTAATCAGATACGACAATGCCTTTTCAT
GCTCTTCCGATTTAGACATTTTGTCTTTACGTACTGCATTCTCCCGTGCCTACAAAATGA
GAAACAAATTGTTCATATCAACAAGTCAGTGAGGAAATTATAGGCTACATGCTGTATTTT
CCAAAAAGGCCTTACCTCCAAATTGGAAGCGAGGAGATTTTGCTTGTTCTCGAAGCTTGG
ATCTAAGAAAAACGGATCCAGAACATCGGGCAACCGCAATACCCTTGAATAGTCTGAAAG
AAGCGAGTCTTTGATTCCATTAGAAATCAGATACGACAACGCCCTTTTATGCTCTCCTGG
TCCAGACATTTTCCCTTTAGTGTGTGTCGACCTACCAAATGAAACTGAACTAGAACTTGT
GCCTGCCCTACTAGAGAAGAATGAACTCATTGTGTCACTATAGTGCCTATAGAGAGGTTC
TGCTTCTGGAACCTGGGATGCAAAGTTACATTTAAGTTAACATACAAAAACGAGCTGGAG
TGGTGCAAATAACTTTCAGGAGTGGGGCAAATACCTGTCCTTTACGGTAGAATTTTGCCT
TAGTTTTGTTAAATTTGTCCTTAACCCTGTATTTATCCAAAGGAACGTATCGTCTATTAT
CGATGGTTTGAAAGTGCGCATCCATTTGATCTGCAATTGTCTGATAGAACTCCATTCTGC
CTGTCCACATTGCTTCCAATTCCTTAGCAAACTCCCACATCTTGGTCTCTTCGTCTAGGT
TCCAGACACGTTTTGACATGTTTGCTCGAAGACTCTATATATCAAGCAAACAAAATGATG
AGTTAAACCCCAGAAATAGCATATCACAACATTTTAAAACAGAGCACAATCAAACCTTGA
ACGACATAAAAAAATAAACTAAAAAGATGATCAAAATACTATTAGCAAACTGAACATGCA
AATGACACTTGTTTTTTATTATTGACCACAAATAATCACACTATTAGCATCAGTGTTGCA
ACTAACGTCATTAAAGAGGCTGTGATCTCACTAGATGAACCAGAGCTAGAGACACTGCTA
CATGATCTCCAAGTCTTGGAATGAAGCTGTGAGTCGCTAGATGAAGGAAAGCTAGACAAA
CCTTCCATTTCTTCCTCGCCTCACCGGGGGCAGCAGAGGAAGAACAGGAGTCGTTCAAGC
TCCTTGCCTGAAATGGATTCTTCAGCTGCAGTCATGAACAAAGAAGCTTAAATCATGCAT
CTAAATTAACGAAGAACAGTGACAAGACACTGATAACTGAGTTATTAAGTACAGTTGGGC
TGGAATATAAATTCCAGTACATAACAACATTGCTGTGTTGACATACCCACAAAGCTGTAG
GGATCAATGTCATGAGATTCAAATATTTATAACTCATAAAGAACATTAATAATGACATAC
AAATAACATGATTTTTTTTGACAAATTTGTAAGTCTAAAAAGTAGCACATGCATACTAAC
AGTGTTAGCTTTTTATAGGATATTATGTTACCTACTAACAGTGTCTTTACAATATTCATG
GCCGAGAAAACCCCTCTCAACTAATGTTGTTGAAACCGGCAATGTCAACGCAAGTGTAAT
GAAATCCGAGAAAAATCCGAGGAAAATCACCAGTGCTCAAAGAAATTTACTAATTCTTGT
TGAAGCCGTAGATCGACTAGGCATAGATAGATCCGGTGAAACCTTTTACTCACCTAGTCC
CGAGCCCGAGGAACTCCCTGCTCCGGCCATCAGTGCCGGTGTAGTCGTCGGTGGCGTGAG
GGAAGAGGTGTG