Contig Data
morexGenes
Links



Map Locations of contig_270048 (4023 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_270048

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43394 1 1196 bp AK363670 Available Available None





CDS Structure of MLOC_43394






Contig Sequence (4023 bp)

>contig_270048 4023 assembly3_WGSMorex_rbca.fasta
CCGCCCGCCGCCGCGCCCCCCCCCGCGCCGCCCGCCGCCGCCCCCCCCCCCCCGCCGCCC
CCCCCGCGGCCGGCCGCCCCGCCGTGGGGCTCCGCGGCCAGCACCTCCTGCACCAGCTCC
AGCGGCGTCCGGCCCTTCCCATCGGGGGCCTCCGCGTCGGCGCCCAGCTCCAGCAGGGCG
TGCACGCCCGTCGCCCGGCCGTACCCCGCCGCGATGTGCAGCGGCGTCAGCCCGCCGCCC
GCGCGCTCCGCGTGGCCCACGTCCGCCCCCGCCTCCGCGAGCAAGCGCAGGCACTCCTCC
GACCCGAGCCCCGCCGCGAAGTGCATCGCCGTGCGCCCCTGCGCGTCCTCGGCGTTCGGG
TCCCGCCGCAGCGCCTCGTCCGCCAGCAGCGCGGCCAGCGCATCCGCATCGGCCTTCTTG
GCGGCATCCCACCACGGCGTCTCGTACTCCGCCACCACGTCCGCGGCTATCGCCTCCGCC
GGGATCCAGGTCGGCTCGTGCCCGTCTTTCCACTCGACGAGGTACTCCGTGGCGGTGACG
GTGGTGGCCGAGCCGTCCTCCGCGAACACCGCGTTCTTGACGGTCCGGCTGGAGACGATG
CGGTCCACCTCTCCGTACCCCTCCTCGTCTTCTTCATCGCCCCCCTTGCTTGCTGCCGCG
GTTCTTGGGTTGGTCTGGTCCTGGAACAGCGCGGCGGCGGCGAGGCGGCGCTTGGGGACG
CGAGGACGGCAAGGGACGGTGCTGGAGAGGTACTGGGTTCTGTGAGCAGCTGGGTTCGGG
GCTTTGAGGCGCGAAAGGGATGGATGTCGCAGGACGGCCTCCATTGGGGGCGGGAGGAGG
CTTGTGGCCGGTGACTGATGCGCGCGTGTGGAGGAGGAAGATGATGGGTCTGGTTGAGAG
GATAAGGCGATGGGGTTCTGAATTTTCCACGCAAATCTGAGCTGTTCATCGTGTACTGAA
CGGTAGAGATAGTTTGTTAATTATCTTAAGTTTTTTCTTTTATTCTAAGAGCATCTTCAA
CAAGCGCGCGGTAGCGCGACACACTAAATTTTAGTGTCGCCCACGCGGGAGCGGGAGGAT
GGTTGCTTTTTCAGATGCTGCAAAATTTAGTGCGTCATTGTAGCGCTTTAGGAGATGCGG
TAAAATCCAGTGCGCGCCTAGTCGATGCTTGGCAAATATGAAACAACATATACTAATTTG
ATAATATGAAACAACATGATCTCAAACATTAAAAATATGTAAAATGAGTTGAACACATAG
CATAGTTCAGATTCATGACATAGTTTAAAATCACCTAAGCACAAGCAATTTCATGACAAA
GAACTTCACACAAACGAATGAAACATCATCAATCATGTCCCATCTTCTTCCTTCTTTTCT
TCCTCTTCTTCTTCCTTCTCGTCTTCCTCCTCTTTTTCCTCCTATTCTTCATCTACAAGC
GCACCATCATAATTCAAAACTCGGACGTAGTTTACACTATGTTCAAAGGTATCATGCGAG
GTGTTCCCATGCCTCTCATGAGAGACCCAAAACTCATGCCTCCCATGATAACTTTCAAGC
CACCCATGCCTCTCCTAGGTGCTCCCATGCCTCCCAAGACACCCATGGCGTCCATGGCTT
CCATGCTTGTTCCTATGCCCCCCAAGGTAGCTCTCATGCCTCCCATGGTAGCTCCCATTC
CTGTCATGGTAGCTTCCATGCCACCCATGGTAGCTCCGAAGCCTCCCATGGTAGCTCCCA
TGCCTCTGAAGCCTCCCATGATAGCTCCCGTGCCTTCCATGGTAGCTCCCACGCATCCCA
TGCTCACCCATCTTTTTTGGACCAAGACTTGATCACGAGAAAGGTTGATGTACTCCTTTT
TCCTATCATCAAAATTAGATGTGTCGATGAACAAGAGGTGCTTCTCATATTTCAATAATC
TAGCTTGCTCCTCCATGGTCAATTTCTTCTCCTCGAATGCCACCTTCCTCTCCTCGGCCA
CCATACTACTCTCCTCAACCACCAACCTCCTCTCCTCGTCCGCCAACTCTTGGCTCCTTG
CCATCCTTCTCTCCTCGTTTGCTTCCTTTCTTGCCATCACAATATCATGCATAGTGTTCC
TTATGTCATCATCTCCTCCCTTCTTCTTCTTCTTCTTNNNNNNNNNNNNNNNNNNCTTCT
TCTTCTTCTTTTCTTTTGCTTGTCCATTTTGTCTTTTTGGCTTGGGGTAGACAATCGAGT
TTGGTGTAGGGCTCCTCTTGGCGCCATCACTTGATGCATCATCATCATCATCATCTAAGA
CCACCACATCAATAGTTTCCTTGGCTTTCTTTGGCACCTCTAGGCCATCATGGTTCTTCC
ATTTCTAGTCATCCTTCAACACTTCATAGCAATGGGTAACACAAATGCTCTCCATTTCTT
AACCTTGCCTTTCCTGGGTTTTTTTTCTTCTCCTCGAAACAAGTTTTGTGCAATATTGAG
CTACAAACAAAAGAACATGTTACCACTTGAAACACAAAAGATGAAGCATGAACATGGAAC
ATAAAGAAATGGCACTTACCATATCTCTATCATTAGTGCCACTTGGGGTTTATCTTGTCA
ACTGACGTCATTGCCGTCGCTCACCTTTGACAATCTATGTTGATCGTCGACCACCAGGAG
CGAAGAGATCTATCGGTGCACTCAATTCCACTCTCGTTTTGTGCATCAAAGTACCCCTTC
ATCCTAAGCCAATATGTATATCTAGTTTGGTCACCCGCAACGGTGTTATCCATTGACACA
TTCAACCATTTCTTACATAGCAAGATGTCTTCATCCACGGTGTAGTTGCACGCCCTTCCT
GTTAGTGCATCAACCATACCCTCACCCTCCTCATCCACTTCATATTCATGATCTTCTTGA
TGCACTTCATTGGTTTGAGACCAATGGGAATTGTTGGAGCCAACACCCATAGTTGAAAAA
TATGTGTCACCATTGAAACTACAAAGTATGATAAAGAAAACTAATCAAGCTATCCACATT
TACAAATTTATCTAGCAACAACAAAAATAAAAGAAGAAAAAAGCATACCTTGTGGGCATT
TCATCAAACACCATGTGTGCATTGGCCGCCGACACACCAAATTGCGAGCCCTCTGGCGCT
TCGGGCAGCGGAGGCGCGATCGAAGGCGCTGCTGGATTCTTCTTCACGTGCGTAGAAGCA
CCATCCACTTTTTATTCTTTTGGGTTGTTGTCGCCGCCGCTGCCATCAGTCGCTTGGAGA
CCGAAGTCCATGGCTTCGCGGCGGGCGACGGCGTGATGCCACCCTGCGAGTTCGTTCGGG
CATCATGAAAAGGTCGCGTGCAAGACCGGTGCTTGTAACCGGTGCGGCATCGAGTGCGAA
ACCGGAAGTTGTGGTGCGAGCGGAGAAACCGAAGGTCGTGGGTATAGGGACGGGTTGGGG
GAATGTCGGCGCGGCTTTTCATCGCAGAAATTTTGTCGGCGATGGCGCGGGGTGGGCGAA
GGCGGGTGCGACCGGGGAATTCAGGGAAGCGGTTGCTCGCTCGCGTGCAATAGTTCGTTG
TCCAGCACACTTGAGCTGCTGATACGTCCATTTTGCANNATGAATTCTTATTGATATTTA
TGTTGTTCTTGGTTACTATTCCACATTATGATACAATTCTTATGCCTTTTCTTTATGAAT
TTTCAAGGTACGTCACAAAGATGGAAATTGTCGAAAATTGGAATTCTCGACGTGAAACCC
AAGTAAAAGGTTGAAAATTCAGTGGACTCCAAATGACCTGAAANNNNNNNGAGAATTTTT
ATGGAATATATGTGAATTATTGGAGCAAAATTATACTAGATGTGGGCCACATGTTGGTGC
CAATCAAATAGTGCGCACCCACACCCCCTAGGCACGCCCTGATGCCTTGGGACCACCTCC
CAGGTGTCCTGGCCCCCCTCTTCTCCTATAAGATGGGTTTTGACCTAGAAAAAAATAAGA
AGAAACTTTCGGGATGAAGCACCGCTGTCTCGAGGCGGAATCCTGGGCAGAGGCCCTTTT
GCT