Contig Data
morexGenes
Links



Map Locations of contig_268959 (2505 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_268959

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43256 2 1403 bp MLOC_43256.2 Available Available LOC_Os03g57840.2, FRAME:-3, EVALUE:1e-25, 13103.m06345 protein peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed
MLOC_43255 1 256 bp MLOC_43255.1 Available Available None





CDS Structure of MLOC_43256






CDS Structure of MLOC_43255






Contig Sequence (2505 bp)

>contig_268959 2505 assembly3_WGSMorex_rbca.fasta
GTCCATGCTGCTGGCTGCTGGAGGAGGAGGGGGGCTAGGGTTGGGACGAGACGAGAGGGG
ATTGATTTCGTGGCTTGGCGCTAAGCTGCTACAGCACGCGGGCGAAACGAGGGAAGGGGG
GGGTGCGGTGGTGGTGGGTGGAATGGAAGCGAGAGAGAGAGAGAAGGGGGGTGAAACGAA
GGGAGAGAGGGAAGGCGCCGGGAAGGTAACAAATTAACCAACTGTTTTGGCCTGCGGCTG
ACGCATCCATGCTGTGGCGCCTGATTTTTTTGTTGGAGGAAGCATCAGCTGACACTACCA
TTTTAATGCTCCCATTTAAGAAAAAAACTCAAATTTAAATGTTCCAGTAAATTTCGTATT
TTTGTCAAAACATTGTGCTTTCCTTGCCCAGACCTAAGCTCGGTTTCAAGTAGTAAAACT
CTCGTGGTACACATTGATTTGGTCGGATGAATTCATCATTTGACTAAAACACAAGCCAAG
TCAAAAGCATATCAAAACAGCATGCGCTACTCCTCCAGACGTACAGCATAAATAAAGCGC
ACGATTTGCCGCTGCAGCGCGACACTAGTACCACCGGAGAAGCAATCATTGCACATCAAC
AAACAACACCAGTCCCTGTGCCAACTCACAGCACATTACTACCATAATACTGTACAACCG
GAGCAGCGGATAATGATTTCAAACAATGGCTACAGCCTGGACGGGGCAGAGGTTACGGGA
AAATTCAATGGCCGTGTCCCCGCACCCTGTGCAAATTTCTGCATACACACGCCGCAGGAG
TAAAAAGTAAAAAAAAAAAAACTCGTATTTCACCTGCGGGTGAATGATCTTACGACAGTT
TCGCTACCGCTTTGCTAAATTTGGGTGCAAAATTGACCTGGTTGCAACATGGCCGCCTAG
CTTCTTCTACCGGTGAGCACTGCGTGGTGTAGTGTCTCAGAACGTGCTCACAAGCCCTAC
GCCTAGGTCTTCCGCGAGCTCGTCCCACAGGGGGATGAGGATGAGCACGACGAGGAACAC
CGACGCTATCAGGGCGCCCCTCCTCCAGGCGCCGACGTCGCTCACGTCGTCCAAGCATGG
CTTCTCAGGTGTTCTCTGGAGATAGATACATCACAAGGTAGACAGGCATAGGTTAGTGCA
CGAAAAACAAATGGATCCTCTCTCCCTCCTACCTAGTGTGCGTCAATCTGTTTTCCTGTT
TATACCTGGCATAGTAGCACGTATAGGCCCCAAGGAAGTGATAGAGGCCCTCCAAGCTGA
ACAAGGAAAAAAATATACAGAACGTTAGAAGTAAACGAGGAACTCATATTCCTGTTAGCC
CATATGAGGCAGAGTCCAGCATTTTTCTTCAGTACTAACTGTATAAAAATGATTAATATC
ACCAGTGTTATGATGTAAAATTACACATAGACTTGTTTATTACGAATGAAAATGTATTTT
CTGTTCTTCTTTCCAGAGGCAAGGAAACAAAGTGTACTGAAATAGAGACTCTCAAGCCAA
AGCTGGGAAGGCTAAGTGCAAGATGCTGGTCATAGAGAAAAAGAAGTCCAAGAGCAACAT
GGACTGACGTACCACTCCAAGTCCAAGCAACGAATAAGTCGTCAAGCCAAATCCAAATAA
AGCATCCTTGCCAAAAGCACCCTGTTGAACACACCACAGAACTTCAGACTTGGTAAAGAG
CCTCGGGATTCTGCTGCTAATCAATCATGTTATTTCACAGCTACAAGGTTAAGCACCGAC
ACGTCCAGAAGTTCTAGGTATTATATACTGTAAAGTTAATGCAGATTTAAATACTGATAA
AACAAGCTATGGAAATCTCAAACTCATGAACAAAAGCGTAAAAGGGGTAATCTAATGAGA
TGTTGAATGTATCACTTGTTGCTGTGCAAATGAAACCCCCTTGATGGATCTGTCTGTCAG
TAAAGTTGTAAATGAATAATCAATGTTAGGTTTGAAGATTTTTCACTGACAGGGGACACT
TGCTCTGTTCTGCAATGGAGACGTACAGGACTTGCCAGTCGAACAGCGCCAAGTTGTAAT
TCTTATTTTTCTAAACATTCAAAAAAACTAACCTCTCAAAGATTCACAAAGTAGAGCTTA
ACACTGTTTTCACTTTTCTGATCACCGAGAGCTACATGCATCTCTAAATAAATGGATTTT
GTTCCTGCATACACTAATTTCTTGAACTCTTAATCATAATCTTTTGTTAGTAGTTCATGG
CTGCATGCTACTGTCCACCTCAGTAGTACAGGTCACGCAAATTGGATATATCACAAATGC
AGGTATCCACTACCACTAGAGATGGAAGACAATTTTTCATTTTATTAAGTTTAGTCATAG
CATCCTAACTCACGCTTAAACGACTCAGAAACTCTTAGGGTGTGTTTGCTTTGAGGATAT
ACTTGCACGAGACGGGTTGATTCCGTCCGCAGTCCACCATTCCAGTGTTTAGTTGAGGAT
GGAACCGGAACCGGGTGATCCTCAGAAAAGGAATATTCCCTATAT