Contig Data
morexGenes
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Map Locations of contig_268911 (5672 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_268911

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_43248 1 1978 bp MLOC_43248.1 Available Available None
MLOC_43249 4 1093 bp MLOC_43249.1 Available Available None





CDS Structure of MLOC_43248






CDS Structure of MLOC_43249






Contig Sequence (5672 bp)

>contig_268911 5672 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGTGGTGGTGGGGAGTGGGGGGGGGGGGGGGGGGGGGTAAAACCATATT
TCAAACATCATTCCAGCCTCATCTCTTATATTCGTGGCATAAGACGAAGGTACCTCTGCT
ACTTGCTCTCATCGTTGGTGGTCGTTGCTCGCCTTTGAACAACCCAAAGAGAGAAGGAAA
GAAAAGCAGGGCATATTCATGTGTTTCCCATTCCTCTGTTTTTAGAAATGGATTTGCTTT
TCGTAATCATATGTATTTTCCTATCTTGTGCTCCAAACGAGGCTTAAGAGGGTCACCACC
TTCTCTTGTTCTTCTACAACCTCATTCAATTTGTGTATGTTCTACATTTTTGTCATTTCA
CGACTAAGACAAAGTGTGAGTACTATAAATCCATTATGTTCTCTTGGCACTTGGCGGGGT
TATTAGAAAAAAAAACATTGTGAAGGAATTAATTTTATTTTTAGGCAGAATTTGAAGGTT
TGGATGACAATTTTTCTTGTCTATTATTTAGTTTCTATAAAAAATATCATTGCGAAAATA
GCCATAGAAGTTATCATCTACCCTATTTATGGACATATCATCTTAATGGAGACCCGCAAA
GAAACCCTAGGCACCTACGAGAATCATTTACCATTTCAATCCCCTCATCGCCAATGCATG
ATCATGCGGTGAGAGGCAAGGGAATCACTTATCAATTTTGTACGTTCGCTTTTGATATGT
TTGTGTTAGTTTTGTGTATTTGTGGTCTTGATTGCGTCATACGAAATATAGATATTTTGG
CTCCATCACTATCCCAACATGGTCTATTATATATTTTTTGAATCAAAAGGGGCTCATGGT
CAATTATATGTAGCCAATGGTTATCACGAGTCATTGTTTTGTGCTTTTGATATTCTTACT
CGTTGATCGGGAAACTAGGCATCGGTTTGACAATCTCCTTGTGAGATGTTCAACAAGCAC
ATGGCACATTCAAATATTTAAAATTCTCTATTCTTGAGGTGTGCAGCTCTTAGAGGCTCT
CCATACCATATAAGGTTAGTCCGACCTTTTGTGCCTTCATCATCGATCGGGTAGAAGGGG
AAACATCAAGATGCAATGCAATGGAGGGATCTAGAGATATCATGGATCAACAAAGTCTTA
TCACTGTTCTGAAAAGTGGATTACCAACAAACTTATTGCATAAATATTTCACAATTAAGC
TTGATCGTGTTGCAAGTCAATATAACTATTTTTAGTTGCACTTGCTTTCATACTACTCAT
TAGACATATGTTGGCTTGACTTAAGCTTGTGAGCACATGGATTACAAGCATGCACATAAT
TTCGCTACATTTTGTGCCAATCTCAACAGCCATTTTATATTCTTTGAAAATCTAGTTATC
ATATTTTTCAGACGGAAGAAATGGATGGTGCTGAGACGATCAAGGAGATGGTACAGGCTG
CACTCAGCCATCTCGAATTCTCGATGTGAGAAGAAGCTCAACCAAGTCCATGAGTCACTG
ATGAAGACTAAGTGTCTCAAAGAATACGTAATGGGCACCCCCAATTACATCATGGTGGAG
AGGCATGGTTTGGTCCAATTTGATACTACAACATTCTAATAAAAGTGACTACAACTGCAG
TCACTTATATGGCCCAAAAATTAGTCACTGTGCCTAGAATTTGTGTAAGCACGTGGTACT
AGTACTCCCTCCCTTCGGATTTGTAAGAGTGTCTCCATACATAATCATATAGAACTTCAG
TTCAGTTTACATCTTTGTGCACCACAACTACTGATATGAAATGATGACGATGACACATGC
GTGTTGTCTCGACGGGTCTCTCGTTGGAGTGGTGTGTGTGGGGCATCTTGTGTGTGCCGC
TCAACAGTTATGATGGTTTTTGCCCGGTTTTCGTAATTAATTGGACAATCTAGTTTTCAC
TAGGTTTATTCTAACTAAGTGAGCAACTCTTTTCTTCTTAATGGATGCAAGATAACTGTT
ATTTCAAAAAAAAAACTACTGGTATGAAATCCACACTTCAACTTTACCATGGTCGACATT
GCATATTCTTTTTTTTATATTGATAAGGGTTGAAGGTAATATAATTTTGAAAGGCGATTG
TGTGGCCCTGTTCATCATGATAATAGTGAGTTGCAATGTGCAGGTCCAGGTTGAATATCA
AGAGCGGCTCCATGTATATCGAAACACCCACGCACTTCCGCGATGGCGGGAGATCGCCAT
CGATGACCTCCGCCTTGTTTTCTTCTCCGCGAGAAAAGAGCATGACACTCTCACCCGTTG
TAGAGTTTTTGGTGCGCGGTGATCTCGCCATAGACATGGTAGACGATTCTTTCTGGTTGT
ACTCGGCAGCAGATTCTTTCGTCTCTGCCGTTGTCGTTCCTATAGCGGGCTCAATGGTGC
ATTCCTGCAGGTCGCGGAAGATGGCCCTTGAGGGTGAACTTTCCGGCAACCTTCCGACCC
TCATGCCCGTGTCAAGATCGCCGGCCGTAATGAAAACCTAGATTGATTGATCCTTTTCTT
TTTGTCTGAGATAAGAAAATAGAGCGATCAATCTGGTCGATTAACTTTCGTAGTCTCTTG
AGACCTTTTTTGAGGGCCATCATCGATCAAACCTGGGCCGGACCTGGTTCCATGCACAGT
TAGTTACTGGCCCACCGAAAACGGGACCCCAAATCCAAAGGGGAAAAACAAGAGCGAGAA
CGGCGGCGGCGGCGACACACTTGCTCGCGATGTACGTGAAAATGGAGCCGGGGTCGCCGC
GGAGCGCACGGCGTTCCGACGGGCCGAGAAGTAGTACAGATGGTGGACGGTGCACGCCCT
GCCATTGTTGTCTCTGCCGTTGTTGTTTCTATAGCGGGCTCAGTGGTGCATGCGTGCAGG
TCGAGCAAGACGGCCCTCGCGGATGATCTTTCTGGCGGCTCCCCGGGCTCAGTGGTTCAC
GCCCGTGCCAAGATCGCCGGCGGTAATGAAAACCTAGATCGATCGATGTTTTTTGGTCTG
AGATGAGAAAATAGAGCGATCGATCGATCTGGTCGATTAACTACTAGATGTGGCAACCAA
TGCCGTCGGTGGCAACAAAGCTCGACACGGTACTGAGAAAAGGAGTAGGCTTAGCTCAGG
ATTCAACTGTCTCCGTTGTAGTCAATCAAGTGACTCGGCGGTGGATAGGCCCTCTCATCG
GAGCCATCGTCGTCATCGTCCTCGCTCATGTAGTTGGCCATGTCGTGCCACCGTACCCAA
ATCCATCATTGTTGTCATCATCATTGCTGCCCCTGCACGATCATCGCCATCATCACCATC
GCCTAAGTCGCTGATGCCATCATTGTTGATGCCTTGGCGCCCGTTGCCATCGTCATCTCC
CCCGAAGTCGTCACCTCCGATACCATGGGACCCGTCCCCGGCCTTTCCTGAGTCAATCTT
TCTTGGTCGAGAAAATAGAGCGATCGATCGATCTGGTCGATTAACTTTCATGGTCTCTCG
AGACCTTTTTTTTTAGGGCCATCATCGATCAAACCTGGGCCGGGCCTGGTTCTGTGCAGA
GTTAGTTCCTGGCCCACCGAAAACGGGATCCCAAATCCGTGGGCCAAGACCTCAAATCCA
AAGGGGAAAACAAGAGCGAGAACGGCGGCGGCGGCGGCGGCGACACAGTTGCCGACGATG
TACGCGGAAACGGAGCCGGGGGCCGCCGCGGAGCGCACGGCGTTCCGGCGGGCCGAGAAG
CAGTACAAGCTCTACAAGCCGCCCAGTCGCAAGGGCAGGTCCAGGTCTCTCTCCCTTGGC
CCTCCGACATCTCTAGCAGGCGGAAACAGCAGAGCAGATTCAAGACTTTTCAACCGCTGC
AGGGGCAAGCAATCCGGTGGCGGTGGCGGTGGCGTTGGCGGTGGCGGCGGCGGAGGGGAC
CTGTCCGCGGTGGTCGACTTCCACGCGCTGCTTGCTGCCGGAGAAGGCGAGCTGCCCGCC
GGGATCCGGAGGTGCCACCGCGCCGGCTTCCACCTGCCCGTGTTCTGCTTCCTCGACCGG
CCAGGTAACTCCCAGTATTGCTCTGTTTTCGATCCTTGTGATTGTTCACGCTCCAGCTCG
GATTTTTCTTCGTACCATCTACCAGCTCAGGACATGGCGTACGTTCAAACAGTGGCAACT
TGCAGAATTTTAGCAGGGGAGCTATTAGTTTCCCGCTTCATGGATGTACTCCTGATGAAA
TTTCTCTTATTTCTCTGGAGGGTCTACTGGTCATCTCTGAAAACTGTCGCTACTCTTCAT
CCTGCTTCTAGTTTTGGGTCATCAGATCATGTCTTGATTCTTTGTTCCAGTGCTTGTGCA
GTTTTCACATCAGCGCCAACTTTGTACCAAACATGAGCGGTAGAGTATGTGAAATTCTGA
TACCCAACTCATGGTTTCCCTTAGCCCCTCCGATATGGCACATATGCCATGCCTGAATTA
TCATGTCAGCAAGTCCTTCATCATGAGTATATCTTTACATCTGTATCCAAAAAGGAGTAC
GAATGGTATCATAACTTTTGAGTAATTAGGGTTTTGCTTGCCTATTTATGTCAATATTTC
AGCCTCCAACACTTGATCGTCATCCTAATACCCCATTACACTGTCCATCTGTGAAATAAG
TACTGATAATACCCTTTGCGTCTTAATTTCTGTAGGATTCTATTTCATCCCCGGTGCTCT
ATCTACTGAGGAACAGTGCTATTGGATCAGGGAAAGCTTGAAAACATTCCCACAGCCGCC
TAATAGAACCAACTTGACTGCTGCGTACGGTCCAATTTCTGATTTGCTCGTTGCTGCTAA
AAATCAAAAGATTTTGGTTGAAGTGGAAAGTTCTAATGGCCAAGAAAGAGATGAGCAGAG
TAATGTTGGGGAAAATGCATATCCGGGTAAATTCAAATTTGTAGATGGCTCAGAGGTCCA
AAAGGAGGAAAGACCTAAGTCGACCACAGCAGCTGCCCTTGTGCGCAAACTCCGGTGGAG
CACCCTTGGCTTGCAATTCGATTGGTCAAAAGTATGTATGTACCTTTTTTTTCCTTTATG
GTGGTGCTAACAATTACAGATGTGTCTTTACTTTCGCTTTTTCTTGAATTTTATTCATTT
AGCATGTGGTGGTATTAAAATTTGGTGGTACTTTACATATGAATAAACCAGCATGCATAT
TTTTTTTCTTCAAAATATTCTGCAATTGTGACAAACATGCCCAATTCATTATAGTCTTAT
TATTATTATGAATTCATAACAACATTATTACGCAAGGAGCTTTGTTTGCTAATGATAGTA
ATTCCTTGCAAAGCTAGCCTTAACCATGATGATATCTTAAAACTATATGCTATTAATCCC
AGTGTGCATACATATTAACATGTCCTGTTTCTGTCAGCGTAACTATGATGTGTCGCTTCC
ACATAACAAGATTCCAGATGACCTTGCTACTCTAGCCAAAAAGATGGCTGTTCCAGCTAT
GCCTTCTGGTGAAGAATTCACAGCAGAAGCCGCCATCGTGAACTATTATGGTCCAAGTAT
GTAGCTTGTCTTTTTGGACATTGAATGACCTCATAGCACCATGGCAAATTACCTCACAGC
GTGTTTGGCAGTCTCAGGGAAGGGGAATGGGAATTAGCAGTGGGAGTTGGCTGGAGGGTT
TGGACATGGGAAATAGTCTCCTAGTCCCATTC