morexGenes - Barley RNA-seq Database

Contig contig_268723
Source Contig contig_268723
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_268723 (6750 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_268723

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43227	2	4355 bp	MLOC_43227.1	Available	Available	LOC_Os01g07500.1, FRAME:+1, EVALUE:1e-135, 13101.m00764 protein alliin lyase precursor, putative, expressed
MLOC_43226	1	646 bp	None	Available	Available	None
CDS Structure of MLOC_43227

CDS Structure of MLOC_43226

Contig Sequence (6750 bp)

>contig_268723 6750 assembly3_WGSMorex_rbca.fasta
GTGTGTGCGTGCGCGCGCGCGCGTGTAAATAAAGAATAAAAAATGTAAACGAGCCATGTC
GTACCGCGTGCTGGGCACAGCCCGAGGAGGGCTGGGTGCTTGGCACAGGCCCGTTTAAGC
CGTGTCGTGTCCGGCCCATGGCGTGTCGTGCTGGCGGGCTCACGGGCCGGCCTGTTTAGC
CCAGCCCGTTTGGCCAGCTATAATCTCACGCTTGTGGGGGCGTGCCACCGATACAGCCCC
ACTGTAAGTGGCCCCACACCATTTTTTTATCGAAAACACCCTTGTAATCTTTTTATTAGT
GTACAGAGCCCCTCAAATAAAGTTAAAATACGAGGGGCTGGTGGGTTCGAACCCACGAAC
CTAGTACTAGCGGACAGAGATCTAGTGATATGCTCACCAGGTAACATGGCCGTTGGATAA
AAAATGAAGAGCCTAGATCATAAATGTAGTGCACAGAAACATTATGCATGTGCGCCGTGC
ATAGTCCCTGTAGTACGTATGTATATGTATACTGTATCCGTGTAATAGATGCGCCCTGTA
GCTACAAACTATTCATGAGATCTGTCCATTGGCCCTGTTTGGATCTTAGGCTTAGAGTTA
GAGTGGGTTCTAACCCTCAAAGATTCAAACAGGTGGGTTATAGTTGGTTAGATGTATCTA
ACCCATTCAAAAACTCTAACTCATTCAAGAGGTGCTTTTTTGGGTTAGAGTAGGTGGGGT
CTAGAGAAAGAGAGAGGTCCAAAGTAGCTAAATGATTGAGAAAGAGTATTTATTGTCCAT
CTAACCCTCCCATCCAAACACCTCTAGAGTTAGAGTTAGTTCAGGTTAGTCTCTAACTCT
AACCAGGTTAGAGTATCCAAACAGGGCCATTGATTCTTAATCTGATGGTCTAGAGAGGGC
GGAATGTTAGTATATTGTTCATCGGTGACTCACCCATGGCAAGTAACATTAATTAGGAAT
GCACTGATTTCATCATCTGAGTTTTAAATTTCACACTCAGGTCAGATCTAGGGTATATCA
CCGGCTCATGTCTAGGCTATCACAAATTACTATTATTATTAGATATGCACAAACTGCTAG
ATGCTTGATTGTATATTTGGGACCATTAGAAATCTACCACTTTGTATGCATGATGGATTC
AATATCAAATTAGCTGATACACAAACTACCGATCAAATATTCTAGCACGGTAAGATTTAC
ACAACAAACTAGAATCACCATATAAGATAATCAACATTATTCTATGTGTTTCAGGTGTAA
GAGCCACATTCAAACTAACGAACAAAAATACAATTTTGTAATTGCAAAATATATATTATC
TTGTGTTCCTCTATGCATGGCCATTGTAAGAAAATAATATGTTCGTTGTCTTCTTCGCCC
CACCATGTTCAAATCCTGGCTTCGTCCGTGCTGACAACGGGCCCGGGCCACTCTTGTCTA
CCATGCAGACAGTGAATACGTCAACATACGCAAAAATGTGACTGTATTTGCAAGTTTACA
CAAGTTTAATGACTATAATCACGTATTTTGCAAGTTTGTGCATCAAGCTGTTCGTCACAT
AAAAGTTCTAAGGCTCCAAGTGTATTTACCTCTTTACAATAATTTTTAATGATAATTTAC
ACGATGAAGGTGGTAAGATAAATTAGTCCAATATGCATGCCTAGTCTAAGTTACTCTTCA
TTATGACTAGTCTTAGTAACTTTTAGTTCACATAGTACATATATCTCACGAAAAGTGCAA
ATGATGGACGGGCACGAGGATGGACTTAAAAAAACATATTTCCACATCCTAAAAAAATCC
AAAAAACTTTACATACACATATAACACGTTGAGGAAAAATTTGATAACAATATACTTTCA
TACCTGGAGTATACATAACAAACAAATACATAAATGAAAACGGCTCCTTTTTTTTTGTTC
GGACGGAATTTTGTTATTTTTGTGCATCTTGCAAAAAATAATTTTTTGAACGAAATTTTA
CAGATCCACTGTGAATATGTATAAGTTTTCACATATTTATTTTCGAAATTTTTTGAAACA
TAAAAATATCATTTTTGCATCTTTTGAAATAAAGTCCTTCAATACCCCGTCCTCCAAAAA
GTAGCACTCATATATCTCAGATATTTAAAAAGGTGCTTGTGTATTATAAAAAATAATATG
GATATTTGACTCAAATTGTGTGTGCCTTATCAAAGGAAAAGTCAAGATTCTAATGCCATA
CCTTCTATATTCACCTTCCATATTTGCGTCAAAGTTTGTGCGAGTATTTTTTTTTGTTTC
TCCCAAATAAAAGAGCATCTGAACTCGAAATTTTGCAGATCAACATCACTCAAGTACTTT
GATGCGAAGATTTTTTTTTAAAAAATTGTCACAATTTTTTAAATGGTGCAACTCATTTTG
AAAGTTGATAATTTAATGTTTCATAAAAAAAGGCAAACATTTTATACAAAGAGTGACACT
TGTATATAGTTGACCTGCAAAGTTTTATGGTCAAATGTTCTCTTGTTGGAAGAAACAAGA
GGATACTTTTTTTATAGAGAAAACACGGATCTTGATGCAAATTGGATGGCCTAGATAGAA
GGTGTAGCTGTATGGGAGGCTGGAAAATCCACTCGAACTTACAAAAATCCAATTTAATTT
TGTATGTGGAACAGATTGTTGCCAATGGATTCTCAAATGTTGTTTTGAGGGAACTGAAAT
CTGATTGAAAACAATAAATTCTAACAATGAAAACACGGAGTACGAGACGCTATCAGGATT
CGTGTCGTTGGCGATTTAATATCACTCAGGCAGGTAAAGGTTGCCCAAGCCGAGAGGCGG
AAGATTGACATGTCGTCACCACTCAACATCTCCGGTGCAGCCGTGTCGATGACACAGAAC
CGACACAAAATGGAGCGGGGAGGATATCCGCCGAGGAGCGGTGGCAACCAAGGTTTGGGA
TCCTGAGATCTCCATGTCGACCTTAGGAGGTAGCGCGCACCAGCTCAGCGTTGACCAAAC
TACACCAAGGGTGGATTAGCAGGCGAAATCGTGGGTTGTGCACAATGCCAAGGGCAACGC
TCGCGGATGGCGACTGCAACAATCACTTGCTGGGAATGGCGGCGTCGGTGTTTTGTGAGG
CTGCGTAGGCGGGGGGTCGATCCCGCGTTGGTACGAGGTTGCGGTGTGGGAGACTACTTG
CAAGAGGGGAGAGGTCGAAAAAAGAGATGGGTAATTTTTAATTGTGACCGTTTGCATGTG
TTGATCTCACGGCTATCGGTCCTTATATGCTACCATAATATCAACTTACAAAATTCAAAT
TTAAAGATATCAAAATTTTCTGAAAAAACCATGGATGCTTATAACACATATGCCGACAAC
TCCTAAATGATTTTTTTCATATTTTTCTGACATGTTTAAATTTAAATTTTGTAAGTTGGT
AGCATTTAATGGTTGGTATCACCTGATATTTTCTTTCAGCCATGCATCACGCCGGTCGGC
CCGCGTCTACTGCTGACCTTTCCAAAAACAAAATATAATAATCGCCTATTTAGTAATGTT
ACCTCTTACTGTAGAAGGTAAGAGGTCATATGACACCTGGATCATAAATATAGACGACTA
AAATAATTTAGGACCATGTAATTTTTTTTGATGATAATGGACAACAAAGTAGTAGCACTA
GCAGTATAGATGTCCCGAACCCATGGGCATATGAACTTACTTTTTAAAAAAATACATTTT
AAATAAGTTTTAGAATGTCATGAACGCAAAAGAAAATCTCATGCATAGATCTTCATTACA
TATGTGTGGTACAAAGTTTCATGGAAAAAAAATTCTCTTTTGGTTTTGCTACCACAATTT
CTTTTTTGCATTGCTTCTAAATATCGCTACACGACACCTTTTTTTGTTATTCATACACAG
GTGAAAGAAAAAATCGTTTTCTGTGAAACTTTCTACGCGCACCTAGAATGTAAAGATGTA
TGCGCGAGATTTTTCAGAAATTTTTGATATTTGGAAATGAGTTTTGCGGGTTCATATGCC
GAGGGTTCATCCATTCACTTCTCGGAGCAGTGCTATGTGCTCTGATAATGTGGACAAGTC
AATCCAGTGACTCGAGAAGTTTAAATAAAATAAAAAATCACTGAAAGAATCTGATCATGG
AACATGTCTGCAGTCGTATCCTGCCGTGACGGACTTCCTCCGGTCCTCGCTGTTCCGGTG
GGCCGGCGACGCCAACTCGTTCGTCGGCGACGCCTACATCGAGCTGGTGTGCTCTCCGAA
CAACCCGGACGGCGCCATCCGCGACGCCGTGCTGAGCTCCGGCGCCGGGAAGGCGGTCCA
CGACCTTGCCTACTACTGGCCGCAGTACACGCCCATCACCCGACGGGCCGACCACGACAT
TATGCTCTTCACGGTGTCCAAGAGCACCGGCCACGCCGGCACGAGGATCGGGTATGCAGC
CTCACTGCCTCAGGCAAGAATGTTACTCCGATTTGCGACGCCACCGGAACCTGAACCGAA
ATGCGATGCAGGTGGGCGCTGGTGAAGGACCGGGAGGTGGCGCGGAGGATGACCAAGTTC
GTGGAGCTCAACACCATCGGCGTGTCCAAGGACTCGCAGCTGCGCGCCGCCAAGGTGCTC
AGGGCGGTCTCCGACGGCTACGCCGCCGCCGCCGGCGGCGCCACGCGCCACCGGCTGTTC
GACTTCGGGCGGCGCAAGATGGTGGAGCGCTGGAGGATGCTGCGGCAGGCCGCCGCCGCC
TCCGGCATCTTCAGCCTGCCCGAGGAGACCTCCGGCCGCTGCAACTTCGCCAACGAGACG
GCCGCCAATAACCCTGGTACGTCGCACGCTCGCACCATGGCCTGACGCCCCGCGTGCTCT
CCCAGTTCTCATCACGCACTCGCCTCGCGCCATTGTTTGCAGCCTTCGCGTGGCTGCGGT
GCGACAGGGAGGACGTGGAGGACTGCGCGGGGTTCCTGCGCGGGCACAAGATCCTGACGA
GGAGCGGGAACCAGTTCGGGGCGGACCCCAGGTACGTCCGGGTCAGCATGCTCGACAGGG
ACGACGCGTACGACATCTTCATCAGCCGCCTCGCCTCTCTCAAATGACAAGGCCGTGCAC
GATTCACACGCGGAAAGTAAATCCAGCCGGCTGGACATGCATATGACCGAGAAGCAACTC
TAGCATCGTCCGTGGATCGGTTTAGAATGACAAATGGAGACCGCCGCCGGCGACGTCTGC
GACGGTGGCACGCCTTGGCATCCCTCGACATGCCGGTCCTGGGGCTGAGCATCAGTAGTA
GTAGAATAGTCCGGGTAGGAAGAAGAGGACAAATGATTTGCTTTGGTTTTCGATCCGTGT
TCTGTTTTTTCTTTTAACTGATCCGTGCTCTGTTTTCTTTTTTCTTTTTAACAGATCCGT
GCTCTGTTGTTGAGCGTTGGTCTCGTTGTTTCAATTTCAGTTTTTATTTATTCCGAGTTA
AAATATGTATTTTTTTGAACTCAATAAGAGCAACTCTAGCACCTCTCATCGTTGTTGCAG
CTAGCTGCCTTCACTTTAGGCCATACTCGAACTCATCACCTCAAATGAATGACTGTTTTG
TTCAAATTTTATCTCTTTGGGTTGGACAATGGGGTGACATCTGGCCAACGCACGGACTCA
TTTGATCCGTCATGGCCGGCTAGCGCCCCTACGTATACATTTTTTTCTCACCGAAACATG
TCTTTTTTTATTTCATCAATGGCATTTTTGATACATTGAAATACATAATTCAACAATTCT
TCGCTAGGAGAAAAAGACCAAAGAAGTCAAGAATCGTAAATAGATATTTAAAAAAATATT
CAACTTTCATAATTGTTCTCACAAATTGGAATAATATTTTATGTATGTCTTTAATGTTGA
TCTGCGGGTTCTCGATGTTGCACACTTGTTCTTCTTCGATTACGAAGAATTAGACATTGC
TTCCACTCTAGTCTCATCTCTAGCCTCTAGTTTAGCAACGAGTGCATGTGCATCTATCAA
ATTTTATGCTATCAATAGATCGATATATGCTTCTTCCCAATATCAAAACTTACATCAGTC
CTACACACAAATTTGAAACAAATGAGCTACCGGAATTGCGTTGAATCCGGTGAACAACCG
AATCAAAAGAAGCACATACCCCATCTTTTTTGCATTTGAAGAATACCCATCCAGCGGTGT
GGTAGAAATGCGGTGCACGACCTACAACGGGCAGTCATCGCACTTTATGGGTTGCAACAG
TGAGCCGACGAGCCAGTGGGAGAGCACCGAGCACGGACGACGTGTCGGGCATGTCTTTAT
CGATGAACAGACGACGGGATAGATCTAAGTGGCTAGATGTGGAGTCAATACCTACATGAG
GTGTGGAAGCGTTGCTAGGGCTGTGCGGTTCCATACTCAGCCAATCCATGACAAGGCGCG
GACGCCGACGGTCGGGTGAACCAAATCCCGCCGCCTCGGATCTAGCAGTTAGCCGCCGAC
ACGAGGGAAGGAGAGGCACAAATCCGGTAGTTGTTTGTCGCCCGGGCTGGACAGCAAGGT
GGCCGAGAAAATGGCAGTGACGGCTATGGCTGGGGTAAGGGACGGTGGCCGGAGGGAGGG
AAGGGAAGGTGATACGTCTCTAACGTATCTACAATTTTTGATTGTTCCACGGTGATATAT
TATCATTTTACAATACTTTTTAGGTATTTATTTACCAATCTATATTATTTTTAAGAACTA
ACCTATTGTAACGCCCAAGATACGATCCTA