morexGenes - Barley RNA-seq Database

Contig contig_268579

Source Contig contig_268579

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_268579 (2883 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_268579

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43206	4	1690 bp	MLOC_43206.1	Available	Available	None

CDS Structure of MLOC_43206

Contig Sequence (2883 bp)

>contig_268579 2883 assembly3_WGSMorex_rbca.fasta
AAGAAAAAGGGTAAGGCAAAGGGCATAGAGAAGGTTGTCTCCGCCACTGAGCCAAAGTCC
GAGCGAACTCAAAGACCATTTGCTATCATTGCAAGGAAGCTAGTCACTAGAATAGGAACT
GTAGCAAGTGGCTTGCTGAGCATGGCACACTACAAGAAATATGCTCATACATGACTTTTT
TAAGACGTCGTTGATGAATTTGTCATAAATCTGTGACGATTTCATACGAGATTGTCGTAA
ACCGTTTGAGGGGGATCAAATCTACATATAAATTACGACGATGTGAGTCAAAAACGTCGT
ANNNNNNNAAGATGAGATCATCATAACTTTTACGGAGATTATAAAAATGTCGTAACATGT
NNNNNNNNNNNNNNCATGTCACTCGTGGGTCCATTATATGTCACGGGCCAAACACAATTA
AAACGTCAAAAAATCTGCAATTCCCTCATTCGTCGATTCAAGAGGGTAGAAAAAATTAAA
AGTTACAAAAAATGGAAAACACAATTACATGAGCTGGATTCCTATTGGTAGAAACGATTG
TACCACGGATCGATGACGTGGCATATATTCATCCATCCATCCAGCTATCCAACCCACATA
TCCATCCATCCATCCGCACATATCCATCTATCTGACTGTGGGTAGCCAATTGGGCCGGGC
AAAATACCCCCGCGCGTGTGCCTATGAAACTAAACGCGCGAAGCCCATCTAAATTTTTCT
GGCCCTCGTCCCCACAGCCTACCCTAATATCTCTGCCCCCTCTACCTTATCCTTTTCTCT
CCCGATCTGAATGGTGGCGGCAGCGAATCCCATACTCTTCCTCCACTCCTCTCCCCCAAA
TCGAGCTCTGCCCCGAAGCGGAGGAAGGTCTCGCCGCCATGATGCGAAGGAAGGTCTCAC
CGTCCCGTCGATTTGGATGCATGAAGCAGTCGAGCTCCACCCCGAAGTGGAGGAAAAGAT
ACGTACACGGTCGTCGATATGGGCACATCTAGCCATGGAGGGCTCGCCCCTCTTTCACGG
CTCCTTCGCACGAAGCTTATTAGTATGCTGCCCATGGTCACCGAGGCGTGGACGCTCGCT
GGGTGCGGCGGGGCGGCGGCGTCCAAGCCGGCCGCGGCGGTGCAGGAGGTGCCCGCGCTG
CTGCATCCTGTCGCCAAGAAACCCATCTCGTTCTGAGGGGTGGCCACGGTGAGCAGCGCA
GACCAGGATGCCGTTGTCGTCGTTGGGAGGCGCCGCGGCATCGCGCCGTGCCTGCTGGCC
GCGCTCGCGCTCGCCGGCGCCTCCTCCTCGGGCGGCGCCGTGCGGGCTGCCGTCCTGGAG
GCCGACGACGACCTGGAGCTGCTGGAGCGCGTCAAGGAGGACAAGAAGAAGCGGCTCCAG
AAGCAGGGGAACATCAGCTCCTCCGCAGCCGAGACAGGTCGGCAAGCTCGATCGATCAGC
TTAAAGCCTTAAACTAGCCATGCCTTGTAGCAGTGCCTATCTGCGATGCTTTGCAAACTA
GTGTTGGCAATTAATCCTTAACCATAGGGTACTTGCAGGACCTGTTGTACAAGTTGAGCA
AGGTGGTGCAGGACATTGACAAGGAAGATCTCTCCGCCGCCGGCGACGTCCTCGGCCCCG
GCTCCTACGCATCGTGAGTGCAGACTGTCAATGCAGCTTTCTCCAAGGCAACACCCTTGT
AACAAAAGCACATATACTTACACTTACACACAGAACTGTTTGACTGATTTCTATCACTGT
ATGTGCGCAACAGTTCAGCTCAAGCAGTCAGGAGAAGAGCGCGGTCGACAGCTTCAACTC
CTCGCTGTCCTCCTTGTTCACATCAGGTATATATATACTTCATCAGTTTAGCTCTAGCAC
TGGAAGAATTAGGAAAAGGGGTCCTGAACATCATCTCCGGTCCCTCAAAAACATTTTCTT
TTTATTTTTCCATTCTTGTTGCAGTGAGCAAGAGCAACATCAACTCCTCCAAGTCGGCAT
TCGTGTCGTCGGCCACGGCGCTGGAGAAATGGGTGGAGCTGGTCGGGCTCACTGGTAAGC
TCAAAGGCTTCTGAATTTTCTGAGATGATTGAATTATTGGCTGACGAGTACATACCTACC
GGAGATGATGTTTTCCGCCTGTGCACAAAACTTTCTTCTATGAATTAGTAGCAAAGCTTC
CAAAATGCATAGCTAATTATTATTTGTCCTTTAGTTGATCTGCTACTGTCCAGAGCAATG
GGAAAGTTCTGATATGTACAAGCTCCTGCTGCTACAGGTGGATAAGGAAGCTCTCATCCC
CATGGCTGCTGCTGCTTCACGCGAACAAGTCTTTTGTTAGTGGTAGAAGTTGGAAAGGAA
ATGAAAGGAAACCCAGTCAGTATTTCCATGGTAAATTTGGGAGCTATCGATTAGAAGTTC
TCTTGATTGTTACCTGCTGCTGTTGTTATTTCCCAGTCAGTCTTTTGTTAGTGGTAGAAG
TTTTTTTAATTGTTGCCTACTGCTGTTGCTATTGAGTATCCGAACTATCGAAAGAGTTGC
GTCATGATCCATGTGTTTGGATTTGGACGTGGCAGGGACCCTAGTAGGCGTATTCACAGT
TTCACACACGACAGTGATACAAAAGAGTTGACATGTAGGATTGGACCTTTAGGTGAGAAT
CATATGATCAATTTAAACAAAAAAATAGTGATACGTTTTACCTGTGGGTATGTGCAAATA
AAAAATACTTCATTCAACAAAAAATGCTCTATAGTAAGAGAAATAAAAAAGGATAAGTTC
AACGTTAGAATTGATCTCCGCCATCTACCGACCCCACCTTCTCCTTCTTGACCTAGGCCC
CGGATCCACACTCGAGCAGCTCAGGTATCTGATCTGTCTGTGTCTGTGTGAAGGGGTGCG
TGC