| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_268507
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_43199 |
2 |
1194 bp |
MLOC_43199.1 |
Available |
Available |
LOC_Os10g40614.1, FRAME:-2, EVALUE:2e-48, 13110.m03766 protein LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
CDS Structure of MLOC_43199
Contig Sequence (3798 bp)
>contig_268507 3798 assembly3_WGSMorex_rbca.fasta
CGCACTGGGCCAAAGCCGGCCCTGCCTGGTTGGTGATATCAACCGGGACTAAATGTCCTC
CAGCCCCACCACACGCTCACGGCCATGTGGAGGGATGAGAATAAACGGTGTGGATTTAGT
CCCCACCTTTTAGTGCCGGTTGGTGATCCGGGACTAAAGACCGTTGCCAAACAGGGCTGA
AGTTCGGTTCTTCATTAGTGTCCACTCTTCAAGTATTTTTTTTCTTTTAAGAAACACATT
GCCGACACTCACAACATGCACGCTCATTTTTATAAACATATGTACACACATTATTTTTTA
CGCATCTCCAAGAAACTTAATTAACTAGTTGATCTTGAGATAATTGAAAACATCATATAC
ATCTCATGGACGTACCATACGAGGAAAGAGTAGCACGGGGCCGAAATAAATTTAAGAAAT
AAGTGAACACCGGTGTCAAGTCTAGGCCACAAACTCGGGTGGGTAGCTCCACCACAAGGA
AATCATAAACTTGCAGCAAGGGAAAGAGGGGGGGTGGGACAATATGCCACCCACCCGATT
GCCTCGCAATCCGCAAAGACGTTGGATTCTGCGTGATGGGACATGAAGTTTTACATTTTA
ATTTTGAAAAACTTTATGATTTTGTCGTTCACTCGTACCAAGTTTCAACAATTGAAAGTC
GTCGAAGTTTTAAAATCTCATCAAGTTCTCGTCACAAGAAACACGAATATGTAAACAAAA
CTTAATTTAAACGTTGGTTCAAAGTATATAAAAAATTGAAAAACAAAAATCAAAAGAAAA
ATGGGGCTTGGGCCCATCCATGCAACTTACAAATCGACCCCCCCCCAACCCCATAAGGAA
CTTGCCATCTAAGCTATGTTGTTCGCCCGAGTGGTCAAGTTCTACTTTTTTTTTGAGGGC
GTTAAAGTTCTACTTTTTTCTTGAACTGGGTTAAAGTTCTACTCCCTCCGTACCTAAATA
TNNNNNNNNNNNNATATTTCATTAGGTGTCTACATACGGAGCAAAATGAGTAAATCTATA
CTCTAAAATATATCTANNNNNNNNNNNNNNNNGTCCATTAGTGAAACCTCTAGAAAAACT
TATATTTAAAAACGGAGGAGTACTTTATAGGTTTGAATCTCGTCGTGTACTGGTGCAACG
AGTTAGCCTAAGACCTCTTTCACTGCAGTATCATAAAGAAATATCATGTGATGTCTTGTA
CTCGCTCTATCTTATAATATAAAAGTGTTTTTGATACTAATGATACTAAAATGATGTGAC
ACTGCAATTGAAGATGAGACACTTAATTACCTCTTCGTAGCATAGTGAAAATTCCCTCAC
TCCGATCCAACAATCACATATTACAATGTACTCCCTCTGTTATTATTATTTTTTATAGAT
TTCACTATAAACTATATATGAATGTATGTAGTCATATTTTGGAATGTAAATTCATTCATT
TTGCTTCGTATGTAGTTGATAGTGAAATTTTTAAAATGTCTTATACTCCCTCCGTTTCTA
AATATAAGCCTTTCTAAAGATTTTCCTAATGGAGTACATACGGATGTATATAGACATACT
TTATAGTATAGATTCACTTATTTTGCTCCGCATATGGACACCTAGTAAAAAATCTTAAAA
GATTTATATTTAGGTACGGAGGGAGTACTACTTAGAAACGGAGGGAGTATGTATCATGGA
AATACTAAATCAATCCATTAGATGATATGCATCTTTCAAAATTCAATAATTAGGAAAAGA
TAATTTGTCACAATAACAACACCAACAACAAGCGGACACATTCCATCGCAAAGTAAAATG
CAATGGCCACTAGCACAAGCTACGACTCAAACGTTTGCGAAACAATACAAAACAACTAAA
GCAAAGCAAATAATTGAACGTATGCATGCACTTCGTCGAAATCATGCATGCATGCATGGA
CGTGACCTCTCGCATCCCCTTTTCTTTGTGGGAGATCATACGACGAACTCAATGCTATCA
CTGGGATTAGGTCGGGCACATGAAGCCGGTCGGGACGCCCTTGCCGCAGAAGTTGAGGAT
GAGGCTGAGGTGGATGGGGAGGTTGATGTGGATGCCTAGCACGTCGGCCTTGATGGCGGT
GCAGAGGCAGATCGCGGCGTCCAGGTCGACGAGCCCGTTGAGCAGCGGGCAGCACCGGTC
ATTCAACGGAGGCACGCCCACCTTCGCCTTGATCAGATCCAGCACATTGGCGCACACGTG
CAGCTTCAGCGCGTCGGTCGGGCACTTGCCATACCACCCGCTCGTCCCGCCGCCGCCTCC
TCCTCCATACCCACCACCGCCGCCGCCGCCACTGCCACCACCACCGCTCCCGCCGCCGAT
GATCCCGCCACCAGGGCCTCCGCCGATGATGCCACCGCCTGGACCGCCGCCGATGATCCC
ACCGCCAGGACCGCCGCCAATGATCCCGCCACCGCTACTTCCTCCACCCCCTCCGCTTCC
GCCTCCATATCCTCCGCTGCCGCCGCCTTGGCCTCCGCCGCCCCCGCCTCCATGCCCTCC
GCCGCCGCTGCCACTTCCACCGCCACCACCTCTCCCACCGCCTCTGCTCCCGTGGCCACC
ATTGTTGCCCGAGTCGCCGCAGCTTGGGCAGGCACTGGTCACTGCAAACAAGAGGAGGTT
AAGGGCAAGGAAGAGGCCACATGAAGCCGACACCTTGGACGCCATATTGGCCACGGGAGG
TTGTAGCTAGGTCAAGCACCTAGCTATGCTAGCTACTGCGAGTGTGTGAGTCTGGCTATC
TAGTCTTGGCGTTATATAGAGGTAGCCACGAGATACAAAGGTGGTATTCTTCGGGAGATG
GGCGGAATGGGACAGGAGTCCGTGATAGGATGACACATGCGTAGATCCACGATAAGGCAG
GCCTGCTTCAACCCGTGGGCTAGGTGCACTGTTTGGTTTCTACTTGAACCTTGGCAGGCA
CTGCGTGCAGATCGTGGGTGACAGCGGTGAAATTTTGGAGGTTTACTCATTTTTAATTCA
GAAGATGGGTAATCGCTTGAACTAATCTACATGCATCCAGCAACAAAAATGCTAGACATA
CAGGGGTTCTACAGGTTCCTTTCAAACTTTTTAAACATGCCCCCCTGATTTCCAAGGAGG
TTGGCCCATGCCTCTGCTATTGACCAATTAGAACCTGCCATGACACCCTGTAATCCCCTC
ATCCCGTAATCCTCTTGTATGTGTAGTCACGACATCTTCAATACTCCCTCCGTCCGAAAA
TACTTGTCCCAAAAATGTATATAATGAATGTATTTATAACTAAAATAAGTCTAGATACAT
TCATCTCTAGGACAAGTATTTCTGGACGGAGGAAGTAGCTCTTTCATCAGGAAAAATATT
ATTAGTAGTACTGTTTAAGGGGAGTTGAGCCAAAAATAGTTCTTCAAAGGCTCTCCTAAA
CATGTTTCCTTTGACGAGATCCCCATGTTTTTCAAACATCCTTTATGTATATGCAGAGAT
AATCTTTAATTTTCTTTTAATACAATACAGACGCAAGCGAACTCCGTCTATGTTGTCTCA
ACATAGCCGGTCCCAAGCCCAGGTAAAGAAGGAGGGTTGTGATAGGGTTGGCAAGCCAAC
ATCAAAACTCAGCCACTCTTATGAAGATGAAACTCAAAAGATTTTCGTTGGGGTGTAACC
CTCTCAGCGACGCGCCACATCGGAACCCGGGTGTGGTGGGAAATGGGCAAGGGCCTGGCT
GTCATCCCCCAAATGGCGCGCCATATCGTGATCTGGATACAATGGCAAGTGAGCAAGGAT
CGGATCGTCGCATCCTTA
