morexGenes - Barley RNA-seq Database

Contig contig_268225

Source Contig contig_268225

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_268225 (397 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_268225

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_43174	1	397 bp	MLOC_43174.1	Available	Available	LOC_Os03g22360.1, FRAME:+3, EVALUE:8e-13, 13103.m02687 protein expressed protein

CDS Structure of MLOC_43174

Contig Sequence (397 bp)

>contig_268225 397 assembly3_WGSMorex_rbca.fasta
AGGCGATGTCAATGGCGGAGGAGCAGTACTACGCTGGCCCGCGCGCGGCCCCGCACGGGC
TGCTGGTGGCGGTAGTGTTGGGGCTGCTGATTGCATGGCCGCTTTTCCTGCAGGGTGACG
GCGGCGAGGCATTCACCGATACCATCGCCGAGCTGCTCGGCCCCGTGGGCCTGCTCCTCC
TCCCTGTGGGGCTCCTCATCATCATCAGCCTCCTCTCCTCCGACCGTGGCCCTCACATGC
TCGCGTTCGGCGGCTCGCCCGACACCGTGCACCACGTCGGGGGATCTCCCATCGGCGTGG
CGCTCATGCTGGCCCTCATCCTCGCCCTCCTCTACTATCGGTATGCGCTCTTCGGCGGCG
GCGGAGACGAAGACGAGTAGGCGACTAAGCGCCCGCC