Contig Data
morexGenes
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Map Locations of contig_266832 (4018 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_266832

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_42927 1 249 bp None Available Available None
MLOC_42926 8 1297 bp MLOC_42926.2 Available Available LOC_Os12g30540.1, FRAME:+2, EVALUE:2e-121, 13112.m03112 protein ubiquitin carboxyl-terminal hydrolase, putative, expressed





CDS Structure of MLOC_42927






CDS Structure of MLOC_42926






Contig Sequence (4018 bp)

>contig_266832 4018 assembly3_WGSMorex_rbca.fasta
TAATGTACTTTGCTGAGACTTTGTGTTTCTCCAAGGCCCNNCACATGACATTCCGCGGTA
TCTTATCATAGGCCTTGTCCAAGTCAATGAACACCATATGCAGGTCCTTCTTTTGCTCCC
TGTATCTCTCCATAAGTTGTCCTACCAAGAAAACCATGGTCGACCTCCCCGGCATGAAAC
CAAACTGATTTTTGGTCACGCTTGTCATTCTTCTTAAGCGGTGCTGAATGACTCTCTCAC
ATAGCTTCATTGTATGGCTCATCAGCTTAATTCCATGGTAATTAGTACAACTCTAAACAC
CCACCTTGTTCTTGAAGATTTGTACTAATATACTCCGCCTCCATTCTTCTGCATCTTGCT
TGCCCGAAATATGAGGTTGAAAAGCTTGGTTAGCCATACTATCGCTATGTCCCCGAGGCC
TCTAAATGTGTGGAGCCTGCGATTTGAACCCCTGCCCCCCTGGGATGGAATGTGTTCATA
GGTACTCCTCCATTCCAGAATATAAGGTACATCAGTTATGGTGCTAGTCAAACTTATATT
ACCTCCATCCCAAAATTCTTGTCTTAGATTTATTTAGATACGGATGTAACTAACACTAAA
ACGTGACTACATACATCCGTATCTAGACAAATCTAANNNNNNNNTTTTGGGATGGAGGGA
GTATATGATTGACAAAAATTATAGAATAAAACATCAACATTTACAATACAAAATGAATAA
AATCTGAAAATACTTTTGTGATGGATCTAATGATATTAATTTGGTACCGCTGATATTGAT
ACTTTTTTCTAAAACTTGTCAAACATGCAAATTTTTGACCTTTGAAAAAACTAATACACC
TTATATTTTGGAACGGAGGGAGTTATTAGGAAGGATATTTGAACTTGATCTACTGATTAT
GAGTACTGCTGTTTGCTCTTCTTTCTATTTGCCAATGTATAATTTATATGGTATAAATGT
AGCTCTAATGCACTATTCTTCTCTGTCTGACAGATACTCAACATCAATTTAGTGCACGTG
AGAGTGATTGGGGGTTCACTTCTTTTATGCCTTTGAGTGAGCTATATGATCCAAGTAGAG
GATACCTTGTGAATGATACTATTGTTGTGGAGGCACAGGTTGCTGTCCGCAAAATGGTTG
ACTATTGGACATATGACTCAAAAAAGGAAACAGGTTATGTTGGTTTGAAAAACCAAGGAG
CAACCTGTTATATGAACTCTCTTCTACAAACATTGTACCACATACCATACTTCAGAAAGG
TCCTCTTTATGCATTGTAACGTTCTAAGCATTATTATTTTCTGTACTATTCGACTAACTG
AGGTTTTCTCGCAGGCTGTGTATCATATGCCAACCACCGAAACCGACATGCCATCTGGAA
GTATTCCCTTGGCGCTTCAAAGCCTTTTCTATAAGCTCCAGTACAGTGACAACAGTGTAG
CTACAAAAGAGTTGACGAAATCTTTTGGATGGGACACATATGATTCCTTCATGCAGCATG
ATGTGCAAGAGCTCAACAGAGTTCTCTGTGAGAAACTTGAAGATAAGATGAAGGTAATGA
ATTTAGTATAGGGCTTCCTATATGGAGCACACAGGCTTCTATTAACTTAGCTTTCTCCCT
AGGGAACTGTTGTAGAAGGAACAATCGAGCAATTATTTGAAGGTCACCACATTAATTATA
TTGAGTGTATAAACGTGGACTATAAATCTAACAGGAAGGAGTCCTTTTATGGCACATAAC
TACACATTATCTTCGTACCAGGTTCCCATTAGCTGTGTTTTGATCTTTATAGCTGAGATA
ATACAATATTGTTTCCTTGCAGACCTTCAACTTGATGTTAAAGGTTGTCGTGACGTGTAT
GCGTCGTTCGATAAATATGTTGAGGTTGAGTGTCTCGAGGGTGATAACAAGTATCATGCA
GAGAATCATGGTTTACAGGTACACACAGCACATATTCTGCTTTCCATTAAGCTGTAATCT
GAAACTTGAATTGGTGCTTTTATGAAGATCTTGATTGGAACTGTGTCATATGAATCTGCA
TTCTGTACACAAGCTCTGTTCAGAAGTAGATGATGTTTTGGAAAGAATGCATTTAAATGT
CTGTAACATGCAAAAAGTTATTTAGATTGTTCAGATGGAAATAGTAACTATATTTTTCAT
AAAATATGTTCACATTTTTATAGCTTTTTAACATATTCGCATTAAAAGAAGCGAAACACT
ATATATCACCCGACGGATCGCAGCCTCGCGTCCGCCGTCTTCTCTGCACAACACGTGTCC
CATGACCACCACCACTCGTTATTGCAACTGGCTCATTCTTGCAATCTCTCTTATCACAAC
AACGACCATGTTGCAGGATTTAGATCCTGGAGAGAAGGCGTGTCTCGTGCTCCTTTCAAG
CTCCAGTCGAGTCAGCCGCCTCCTCGCGCTACTCCGAGGTCCCGTCGAGTCGCCGCCTCC
CTATGTTGCTCCGACTGCTGCCATCGGCGCTCGTGCTGACTAGCACGCCAACGAGCTTCT
CTGGGACCTAGTTTCCCCGTCGAGCTGTCATCTCCCCGTGTTGCTCTAACAGCCGCCGAC
GCGTGGCACCGGCAAGCACATCGACGAGCTTCTCCGGCAAGCTCCTCCATTGAGCTTCTT
TGACGAGTTGCACACAACTAGCACTAGAATGCTCTTTGCAACATGTACGATGTTGCAAAA
GATTTTCTGTAACACGAGCTCTCTTGCAAAAACTACGGTAGAAAACAGTAAGCAAGATTT
TCTGCAACACATCTTCTGTTGCAAATATTTTCTGCAACATTACCTTTGTTTCAAAGACTT
CTCAGAAGAAAAATGAACGTCCCGAGGTATTTGCAACAAACGTCTTGTTGCAGAAAGCCT
TCTGCACCACCACTATTCTTGCAAAGGGGTGGTTGCTTACATGTATAGATCAAACGGTCA
TTAGTGTGTCCATCTAATGGTCAGCGAGGCAGCGGATCTTTTGTGATTATCCGCCGGTCT
ATTTATGTGTGTCCCTCAAAAGAAACAGTCACAATTTCATGTTTGAGACACTTCGCATGT
CGAAAACGCCATCTATTTATGAGCACAGGGGTACCTTCCATTAGTTTGAGAAATGCAGTT
TCTCTTATTCTCTGATTTATTTTGGTATTGTCTTGGTGACTGGATTTCAATCTTGATATT
TCAGGATGCAAAAAAGGGTGCTCTCTTCCTTGATTTCCCCCCTGTTTTGCAACTTCAGCT
GAAGCGTTTTGAGTACGATCATATGAGAGATACCATGGTTAAGGTAGGGACTGTCATACC
TTGCTGTTTCTTTTATCTATTCTTTTACTTATATAGTTTTCTACGTTTCGAAGCAGTTGC
ATATTCTTTATATTATTCATGTACATAATACCTGTTCTGTGGAAGTAACAAATGATGTGA
TTTGGACATTTTTTATGGAATACTGGAACCGTAAGAATCACCAATTGTTTCCATAAACAC
ATTATCTTTGAAGCAGCACAAGGTTGTGGAGCAGCTCCTCCACCTTTGCTGCTAGAAAGT
GTACATCACAAGTGTTGAAAGAAATACTTCAATGTGGTGCGATAGATATCCCTCTAGAGG
TGAATATAGCCTGATATGGCAGCAGGTCAATAAAAAACTACAGGCTTTGTTGTTGTTATT
GTTGGTGTTGTTTAAAATACACAATCTGTAAACGGCAGCCTGGTGCATGTACCTCCCGCT
TGCACAGGGTCCGGGGAAGGGTCCGACCACTTTGGGTCTATTGTACACAACCTTTCCCTA
CATTTTTGCAAGAACACACAATCTATAGTTGAGTGAAATGGACCATTCGTGAATCTTATT
GAACCATTGCATCGTACTCCCTCCGTCTCGAAATAAGTGACTCAACTTTGTACTAACTTT
CTGTTAGAGTATATATAATATAGCCATGTACCCTTTTGTACTTATCCCATTGTATAAGGG
GTTTCCTGCATATATTCCACACCTGTACATGTATATATTGTTAGGAATAAGCAACTTG