Contig Data
morexGenes
Links



Map Locations of contig_266778 (4917 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_266778

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_42911 8 3057 bp AK360855 Available Available None





CDS Structure of MLOC_42911






Contig Sequence (4917 bp)

>contig_266778 4917 assembly3_WGSMorex_rbca.fasta
GTAATTTATTGAAATTGCATGCTTAGTAGTGTGTTTTTGTCTCAGTTACTTAAAATTTGT
GTATTCTTTTTCCTGTGTCAACTACCTTATGTTCTGATTTGTATATTTCAGGTATGTCAA
CCGTGCCCTATATCTTTTGCACCTGACATGTGGCCCATCTCACCCTAATACTGCTGCAAC
TTACATCAATGTTGCTATGATGGAAGAAGGGTTGGGTAACGTCCATGTAGCACTCCGTTA
CCTGCATGAGGCGCTAAAATGTAACCAACGGCTGCTTGGTGTTGATCACATACAGGTATG
CAACTCAACCTCGCCTTGTGTTTCAGTGTGACTGTATGTTGCGCTCTGACACATACATTA
GTGCCCACTTACATGGCTACACTGAAAGCTCATCTTTATTGACAGACGGCTGCTAGTTAT
CATGCTATTGCTATTGCTTTGTCTTTAATGGAAGCATACTCGTTGAGTGTCCAACATGAA
AAAACCACTCTACGAATACTTCAATCAAAGCTCGGATCAGAAGATCTTCGAACACAGGTA
ATCAGAAAGAAAAATACTTCCTGATGATGAATTCTCCCACTTAGTCTTCAGTTTTTTTTT
CCAATGATCTGCCTTTCTCATAGCAACAAGGAAATCTGATGACCCATATTTTGCACAGGA
TGCTGCTGCCTGGCTGGAATACTTCGAGTCCAAGGCACTAGAGCAGCAGGAAGCAGCACG
CAATGGTACTCCAAAGCCTGATGCTTCAATAGCAAGCAGAGGCCATCTGAGGTAGACGAC
ATAATAGCTTGTGATAGCTAAATATTTTCATTGAAGAGATGGCAAAGTTTTTTTTTTTTT
TTTTGGAGTCGTTTGCTAGTGAACATCAATATTGTAAGTGTCAACATGGATTCTCGATAA
AGTTTAATAGAAGTGATGACCTGATCCAAAATGGAAACTTTTACCTTTATAGCTGTTCGG
TCGGAGACAGTGCAAAAGGAAGAGAGTACTGAAAAATCTAAATGCGTGGATGTATTTACT
GAATATACAATTTTGAATACTGTCTGCTTCTTCAGTATGGATCTTATATTGTCCTTTTGT
CAGTGTATCAGATCTTCTCGATTATATCAATCCAGATGACGAGCTCAAGGCTAAGGAAAT
GTTAAAGAAACAAGCCCGTGCTAAGGTAAGTTCATCATCAGGACCTTTCTATATGTTGTC
TTATCTCTCTAGTGGTCATCCTCATGCATTTACATTATTTGTCGTAGATAAAAGGTCGTA
CCGGGCAAAACCCATCTGAAATAGCAGATGATGAAGATCAAAGGAGCCCTCCACCTAACA
GTGAGCGTTCATCAACTGAGAAGGAAAACTCTGAAGTCAAAGAGAAATTAACTGAGAAGA
AAAGCTCTGAAATCAAAGAGAATGGAACCGTTCTGGAGCATGTGAAAGTGAAATTGGAAG
AGGAAAAACCAAGTAACACTGTGGTCCACATGCCTCAAGATGATTATACTGAAGAGAACA
GATCTGAGGAGGGGTGGCAAGAGGCTGTTCCAAAGGGACGTACCATGGGGAACCGCAAAA
CTGGTGCAAGTGTGAGGAGGCCAAACCTGTCAAAGATCAGTACAAATGCCAGCAATAATA
GTGAGAATGGAAGATACAAAGGCAGAGTTCCATCCAACTCTTCCCCTCGAGTTTCACCTA
ATGAGACTGCAGCTTCTGTTGCTTCCAGCCCTCTTGCAAAGAAATTGGCAAAGAGTTCGA
GCTTCAATTCCAAAGCAGGTAATCCGGCTATCTCATCAAACAGTGGGGAGAATTCACCCA
AACCCAAATCCATGGCAGCAAGCTTAGCCACCACCCCTGCAGCTGCCAAGGTGATGCCAT
CTGCAGCACCAATTGTCAGTCAAACAGTAAGGAAGTCACTGTCATACAAGGAAGTGGCAA
TAGCTGCACCAGGAACTCTTGCCAAAGCATTGAATGATGTAACAGAGGAAAAGGATGCAA
CTGCTCCAGGTGTAAATCTTGGAAGTGCCAAGGCTCCCAAAGAAAGCAATGTTCGCCCTT
CTGAGGAGAAAGACGGAGCAATACAAGTGTCACCAAAGGATAACAATTTGCAAGTATCAA
AAGCAACAGATGAGCACAAATCTCCCAGTTCTGATACTGAACAAGCCAATGGTTCGGTAG
GATCAAATCAAGCTGAGAAGGCCTCAGATTCAGCAGAGACATCTACAGACAAGAACCAAT
CACCAGCAGCACTAGCGGACGTCCCAAATGAAGAAGCAGCAACTTTGACTGAGGCGAATG
ATTCTTCATCCAATGATGATGAAACAGGTCCAGGAGAGGATAATCAAGAACAGCTGTCTA
GTGGGGCCGAAAATGAGAAATCTTCACCATCTGGAAGTGAAAAGAATGATTCACCAGTAG
AAGGTGCCAAAGAGACGGCCAGTAAACTCAATGCTGCTGCTGCTCCATTCAGTCCAGCCA
CTGTGCCAGCTTTTGGTTCAATGGCCGTACCAGGTTTCAGAGAACATGGAGGACTCCTGC
CATCACCAGCCAATGTACCCCCAATGCTGGCCATCCCTCTCCGTAAGCACCCTCACCAAT
CTGCGACTGCAAGGGTTCCTTATGGTCCACGTCTAGCCGGAGGGTTCAACAGATCAGGGC
ACCGGGTGCCTCGTAACAAGCCTGTGTTGCCAAGCGGAGAAGTTCTTCCAGAGGCAGCCA
CATCCCCTAAAGTGATGAACCCTCATGCGGCGGAGTTTGTGCCGGGTCAATCTCGGAGTC
CTGATGGCCATCCAGGATCTCCTACTGAACCTCTAGCATCGCCAGCTGGTATTCAAGCAT
CACTGGATGGGCTTCCATCATCTCCAGATAGTATAGTTGAATCACCCAAGACTGTATCCC
CGCAAGTTTCAGAAACTAGTGAGACTAGTCCCGAAGGAAACGATACATCTAGTGGAGTTG
ATGTTGAAGCTGGGACTGAGAGCAACAACACGGAGGAGAAGAACAACCATGTGGAATGTG
AGGACAGTGAAGTGAAACCTGATCAAGCCATAGTTTCTGAAGGTGCTGAAGTTGACGCAA
CAGCCCCGAAAGATGCTCGAGATGACGCTTCAACCCCAAAGGATGCTCAAGATGATTCAA
GCTTGACTGAAAAGCCGAAGTCCTGGGCTGATTACAGCGACGGGGAAGTCGAGGCCGTTC
AGGTTGCGAGCTAAGAAAAGATGGTCTTCTCAGCCTCTCAGGTAGTTACAGGAAATTTTA
TTCTTACACAGATGAGCCTTTCTTATGGACAATAAAAGCATGCTAATGGAAACCAACATG
CTGCTGTTTTTTTGCTGAAAGGAGGAGATGCTGGTTTTCTGGGTAGAGAATTAGTTGCTT
TCTGATCTATTTCATGGTTTCTAGTACCTACTTGTTTCTGCTGCCCTGCAGTGGTGCTAC
GGTATTGCAAGGGCTTGCATTGCCATGGAACTTTGAACATCTTCAGAATGTCCAACTGTC
ATCATGGTGGCCTTGTTTCAGTTTGCTTTGTCATTGCAAAGGAGCTTGGGAAGATCAGAG
AGGTGGTAAACACGTTTTGCTTGGCATTTTTATTTCCTTTATCCATAAACTGGACACACT
GCCGACTTGACATCTCTGTAGTTATTTCTTCTGAATTTTGATAAATTAGACTGCTGTAAA
GAAAATCGACACTTCCCTGAGCAGGAAGTTTGTATCAAGTGTCCCTGTAATCAGGCCGTT
GCTTTTTGGACAATTTTGCTTGTACAAGAATCCATGAGACACTGATCCATTTTGTGATTA
TCACTTGATTTGATTTGATTTGAAGATTAATAGATCTGTTTTATTTTTGTATTGTTTATG
TGCATTTCTAGGATGTCCATTATAAAATTGTGGCGCGTATCTCAGATATATGGACCAATT
CAACAATGTTCTGGCCAGACACGATTTTCTTATGACGTTTTCAGCTTGAAGGAACAACGT
TCTTAGTTTTGTAGTTGAGGGTCGAAATATAGATTTTGACAATAATTTGTTGGGCCAAGT
CCCTCCACACGGAGGTGCGTTGGCAGCCTACCATTGACCCACATAAGTCCAACATATCTA
TACCTAAGGCTACTCCCAATGCTCCACCTTGTACAGGTGCTAAGGCTGTCACATAGGCAA
AAAATCAAATGTGACAAGCTAATTAATAGGAGAGAGATGAATGTGGTGACCTCAAAAAGA
AACAATGCGCTTAAGCGCGTGAATTTAGGTAAATAATTAAATGAAAGAAATGCACCAATG
CATGCACAACTTTAGTTGCAAAAGCAGTAAATAAGGAGGTTTAGCTACAATAAGCCAAGC
AACTATGCATTGAGGACTTCAGCTGCTAAACTATTTAATGTGCTTAGCACCTCATCTTAT
CTTATATATAGCACACAAAGTCGGCTATTGCCTCTGTCGGAACACCGTCGCCGCCGTTTT
GCAAAAAAAAAAACATCATGTTTTATGGTAATTAAACCCGTCGTCCCCTTTTAAGTGACT
AATCTAAGATAACGTTTCATTTTTGCAGAATCTTCCCTGTAGTTTAGTATATTCAACGCA
CAATCCTTTAAAAAGACCCATCACGATTCACGTCACGATCCCTCCCCATGCAGGGCGCAC
GGCCGCCGCCTTCCTCGGTGAGTCCGCGGACGGAATCCACTCCGGGAGCAGCGGTATCCA
TTCCTACGATGCCTCCCTCTCCCTCGAGCATCGACCTCCTCGACAGCCTTCCTCCCGTGC
CATGTATAGGAGACGTCGGCTGCCACCATTGCCGGAACGCCTGCGGCGGCTGCGCTGCTG
ACTACTTTAGTGGACGTGATGGCTTAGGTACATCTCCCTATCCCTGATCTCTTCCTCCAC
TCATCTCTTGCTTGCCTCTGCCATATTGAGGTGCATCTGGATCTGGGCGATTTCATG