morexGenes - Barley RNA-seq Database

Contig contig_2642658

Source Contig contig_2642658

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2642658 (298 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_2642658

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_42415	1	202 bp	MLOC_42415.1	Available	Available	LOC_Os07g29620.1, FRAME:+2, EVALUE:4e-25, 13107.m02977 protein OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed

CDS Structure of MLOC_42415

Contig Sequence (298 bp)

>contig_2642658 298 assembly3_WGSMorex_rbca.fasta
CTGCCTTGCCCGTGAGGATCCTGTTCTTGTATCTTTGACATCTGCCACTGTACATGTTGC
GTGTAGGCTCTTCTACTTCTTCTTCAAATCCAGGCGACACAAGAAGGGGGACCCCGTGGT
GATCTGGCTGACGGGAGGGCCCGGATGCAGCAGCGAGCTAGCCCTCTTCTACGAGAATGG
CCCCTTCCACATCACGGACAACATGTCGTTGCTCTGGAATGAGTTTGGCTGGGATCAGGT
AGATATATACAGGCAGTTTGTGTGCTAATCAACCAATCCGTGTGGTATTTTTCTTACA