morexGenes - Barley RNA-seq Database

Contig contig_2636357

Source Contig contig_2636357

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_2636357 (461 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_2636357

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_42304	1	195 bp	MLOC_42304.1	Available	Available	LOC_Os03g08440.2, FRAME:+2, EVALUE:4e-29, 13103.m00971 protein ribosomal protein S2, putative, expressed

CDS Structure of MLOC_42304

Contig Sequence (461 bp)

>contig_2636357 461 assembly3_WGSMorex_rbca.fasta
TTCCCCGACCAACCATGGCGGCAGCGACCGGAGAAGCCCCGCGGGCGCTGTCCGAGAAGG
AGCAGGACATACAGATGATGCTCACCGCCGACGTCCACCTCGGCACCAGGAACTGTGACT
TCCAGATGGAGCACTACGCCTACAAGCGCCACTCCGACGGTACGTGCATGCTCGGGATCC
TCTTCATCCCGCCGCTCGCCTACGTTGCCTAGGTTCAATCGTCGTCTCCATGGATCTAGC
CTTGCCCTCTGTACTAGTTAGGGTGTCGATCTGCTCCGGATCGTGATGCTTATCGGTGTA
GCNNNNNNNAAGTGATGATGCTTCTGTCCTTCTTTGAGATGAACTGTGGAATGTGATGCG
TTTGTTCCTTGTTTGTGGTTCCTACGCATCTACATCATTAACCTGGGCAAGACATGGGAG
AAGCTCCAGCTCACGGCGAGGGCTTGCTGGATCATCCGCGC