Contig Data
morexGenes
Links



Map Locations of contig_263534 (2023 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_263534

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_42278 1 164 bp MLOC_42278.1 Available Available None
MLOC_42279 1 720 bp MLOC_42279.1 Available Available LOC_Os06g48600.1, FRAME:-1, EVALUE:1e-63, 13106.m05168 protein macrophage migration inhibitory factor, putative, expressed





CDS Structure of MLOC_42278






CDS Structure of MLOC_42279






Contig Sequence (2023 bp)

>contig_263534 2023 assembly3_WGSMorex_rbca.fasta
CAACATTAAGAGAGAGTGGTTGGGATGATTTATTNNNNGATGTTCAAGAATTTTGTGTTG
CTAATAGTATTCCAGTGCCAAACATGGATGAAGTAATACCAGTTCGTGGTCATTCAAGGA
AAGCAGGAAGGACTATCACTAATAGTATTCCAGTGCCAAACATGAATGGTTGAATGACTT
GATGATCTGTTACACCGAGCGGGAGTTATTCAAGTCAGTTGATGATAAGGATATTATTCG
AACATTTACTGCAATTAGCTCTCGGAAAGGGCATTTGCCTCGTGATTTTTTGTAGTGCAT
TGTCGGTATGTTTCATCTGACCATTTCTATTCTTGCAAAGCTGAATATGTATCTTTTGTT
GTTATGTCTCAACTTTATTTGGATATTGATATATTAGCTCACTTCAAAATTAAATTTTGT
GTGATTATTATGCACTTAGTCTTAACTTGCCCAGGCTCCATAAAATTTCTGCCTCCGCCA
CTGAATGCAGTACCACCATATGCTGATGTACACGCTGTGAATGTGCTGATACTATGGTGG
TCAAGGTTATTAGTCCTGTTTGGGAAAGAATTTATCTGAAGAATTCTGAACTCTCAGTCA
CTCAACTGGAGTGGTTGGATTGTTTTCACTTTGTGCTTCTATGTAACTGAAGAAATAAGC
AAACAAAAGCAGAGCTTGCATTCGGATGACTTAAAATCACAGCACTAGTACTAGTTCAGA
TATGCGAGAAATATGAACTGACGAAAATCCAAGATGCAGATGATACACAATGGGGCATGG
TACGGTACTGGTTCACTACTGTCGCCAACATCTTTCTTCTGATGGGTTTGTCTTAGAACG
TGGTTCCGTTGAAGCCCACATTGTACCCCTGCAGCGCCAAAACGATGAAAAAGAAGATCG
AGTGACGGTGTGAGTAGGGTTGTGGGGTGGGGGTGCGGAGGAGGATCAATGTGCGTGCGT
ACCTGGACATCGTCGAACTTGACGTAGAACCTGCTGGGGCTGATGGAGAGCTTGGCCTCG
AGGATGTCGGCGAGGGCGGCGCTGAGCTTGCCGTTGACGCCGGGGCCGAGGCCGCCGATG
GACATGATCTCCCCGTACGCCGCGGGCTCCTCGCTCCCGGCGAACGACGTCGGCACCGAC
CCGTCGATCGACACCGTCACGTACTGCGCCACAAGGGGTAGCGGGTCAGCAACGCAACGC
ACTCTGAGCCCGGAGGCATTCCGTCGAGCAGGCGGAGCGCGCGCCGGGGAAGGGGGTGGT
TTAGGGGTCGGGGCCTACGGATTCTGGCTTGCCGATGATCCTGGCGAGCGCCCTGGAGCA
ATCCCTGAGGATGTCGGCGGCTACGACGGCGTCCACCGGCACGTTGGTGCTCAGGCTCAG
CTGCGGCATGGCGTACGGCGCGGGTGTGGAATCTGTGGACAGGGGAGCGAGGCACGCGCT
AGCCGAGACGAGCGGGAAGGAGGAACGGAGAGGGATTGATTGCGTGCGGCGATAGGGAGG
CAGGGGAGGATTTGGCGCGGGCCCAGGCGGGGCCACGGGGCCGAGCTTCTTTCCGGCTAG
GCGAGTTCACTCGCTGGGGTGGCAATGAGCCCAAACCTTGCCAACTGGGCCATGCCTGGC
AGGCCAGCCTGTTAGCATGCGTGCCCGACTTGTGTGTCACTTGTTGTAACATAAGAAGAT
GAGATTGATCTTTGAAAAGAGTACTCATTAATTAGTAATTTACATCTTTCAAAAATCACT
CCCACCTTCTTCGGTTGCGACAAGTGGTGCACTATATATGTGTCACTTGTTGTAACCTGA
ATTGTTTTTATTTTTTCGTAGATTCGTATTTTTAAAATATTTTATCTTGGACACGACTAC
ACAGCGGCGCCACACCTATGTCTTCCGGTGCGGCGGCTGTACCACGTCTGCTAATTGCCT
AATTGTCATGAAAAATAGCCACATGCATGTCTAATTGTCACGAAAAGTAGCCACATGCAT
GCCTAATTGCCACGAAAAGTAGCCACATGCATGAACATAAATT