morexGenes - Barley RNA-seq Database

Contig contig_2625222

Source Contig contig_2625222

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_2625222 (359 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_2625222

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_42110	1	349 bp	MLOC_42110.1	Available	Available	LOC_Os06g13680.1, FRAME:+2, EVALUE:6e-20, 13106.m01510 protein B12D protein, putative, expressed

CDS Structure of MLOC_42110

Contig Sequence (359 bp)

>contig_2625222 359 assembly3_WGSMorex_rbca.fasta
GATGTGCTGAAATGATTTCATCTCCACGGTCAGCAAGATGGGGAGGGCAGCAGGAGTGCT
CGAGAACCATGAGGAGGGCAGGCGCTACGTCGAGCACGGCCTCAGAGCCTACGTGCAGGA
CAAGACCTCCGAGATCATGCCAGGAATCAACAAGTTCTTTGCCATGTATGAGCTTTTCGC
CATGTACCGTGAATGGCAAGAAGAGCTGGCCAAGGAAATCAGTGGAAGGCAGGTAGGTAC
GAAATTTGTTTGATGTTGTTTATAATAATAAAGAAACAGTAACTTGCAGAAGATATTTCT
CACTGAGCTTATGGAGGCAATTGCGTCTCGTCTCATGCTATATTGTGGCAATGGATAGG