Contig Data
morexGenes
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Map Locations of contig_258913 (1166 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_258913

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_41456 1 271 bp MLOC_41456.1 Available Available LOC_Os03g46660.1, FRAME:+2, EVALUE:4e-18, 13103.m05023 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed





CDS Structure of MLOC_41456






Contig Sequence (1166 bp)

>contig_258913 1166 assembly3_WGSMorex_rbca.fasta
GCCTATTGATAGTGAACGGAGTGAGTGGTATATTGTTGGAACATAAATAATAGGGCCCTA
AAACAATGTTCTTTTGGCCGAGAAAAACGAAGGCCTGTGAGTTTGAATTTTTTTACAGTC
CATTGGAAATTAATTGAACATGTAAGTGGAGATGCTATATTTTGAGTTGACTGATAGTGT
CCCACTCAAGATATATTTGGGTTCACTTTGGGTTCTGTAACAGTTCCATCTGATTTAATC
TCTTTCACTACACAGCAATATCAAGGTATCTTGGCGGTCAAAGGCCATGGCCTCTGCCCA
TCCCTCACAAGGATTGCCTTCAGGGATGGATCTTTCTATGATGGATGAGTACACTTCCAG
TCCAAGCTGTTGCAAGAATTCGTCAAGATACCCAGCATTGGCAAGACTTGGATCTTCAGT
TCCAAAGATGGTATGGACTGTTATTGACCTGTTGTTATATATCCACTTACCTTATCCAGT
TCTTGTCCACTTCAAATTGCTCGCAGGTGGGCGTGGACTGCGGCGCCATCCAGCCCGGGG
GAGCGTGCTTCGAGCCCAACATGGTGAGGGCCCACGTCACCTACGCCATGAACCAGCTCT
ACCAGGCCGCCGGCAGCCACCCGTGGAACTACGACTTCCGGTAGTCCGCCACCCTCACCT
CCACCAACCCCAGTAAGCCTCCAATCCTTCCTTGGCACCTTCGATCGCCATTGCTCGCCG
GACCATGCATCACGGACAGGGCAGCAGAGCTTGTTCTTTGCGCTGCCAGTGCCCGGACAG
GTGCCAGCATTTGGCACTGCGCTACGCACATGTGCATTGGTCCTTGATCGCCATTCACTC
ATTGTCCATTGCATCTGGCCACTGACAATTAGTACTGGATGGAGTACTACATCACTGTAC
CTCATTAACCATCCTCTGTGTTTTACCGCCCTGTCGAATGAATCACACAAAGAGGCTACA
TACTAACCATGGTTGCGTTGGTTTTTGGAGGCTACGGCTCGTGTGTCTTCACCGGAGGCC
AATGATGCATGCAACTAAAAAAATCTTCCGTACGTGATGGTGCGGTGAGCGCCATGATTG
GATCGAATCATCATCGAGTAAAGCCACGAAACAGTGGGCGGTGGTTGTGCGTGGGATGCA
TTCCTCCCCCTTGTAAAGCCACGAAA