Contig Data
morexGenes
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Map Locations of contig_2557196 (1223 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2557196

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_40228 5 1215 bp MLOC_40228.5 Available Available LOC_Os10g35810.1, FRAME:+2, EVALUE:4e-11, 13110.m03231 protein thylakoid lumenal protein, putative, expressed





CDS Structure of MLOC_40228






Contig Sequence (1223 bp)

>contig_2557196 1223 assembly3_WGSMorex_rbca.fasta
TTTAAAAACACTGTCTTGTCAGGATCAACCTTCAATGATGCTAATATGAGGGACTTTGAT
TTCAAGGGCATACTCACTGGCTACATTGACCTTCAGAAGCTATGCATAAGCAACAAAATC
ATTGAAGGCAAAAGATTGGAGCTGGGATGCACGTGATTCAATCATAGACACGTTTATGGC
AGCATCGTCATCCTCCTAAAAAATAACAATAAATTCCATTACAATTTATCAAACAATACT
TTTCATTTTTGTATTGTAAGAAAGAAAGTTAATACACTTCAACGACAAAGGAAGGTAGAA
AATATTTTGCAAAAATAGAGGTCTGATTGTGCTTCGTCCCCGATTTATCTCTTGAATGTA
AAGAAGTGAAGCCATTTGCCGCATGAAGCTATTTCACATTTAACACTGCCCAGACCATTT
AATTTACATGAAGCAACCATCATGTATATATTGCCTTCAGTATGATCAAATTATATCGAC
TGTAAAAACTAACACACATGGGGTTTCCAATTGCCAAAGTCAAACGTACCATTCTTTCAG
TCAGAAATGCAGAACATATATCAAATTAACAAATGAATTACTATCCCTGACGGTCGACAA
AGCAAACTGCTCAGAGAACAATTCATACTCTGATATTATGGGCATATCCTAAAGCATTTT
GAGAAGCATAGAATTAAGCAAAGAGACCATGAATATTTTTTGGCACCTTTCCTGTGCAAC
TATCACTTCAGGTATCAAAATGTTGATGTGCTATCTGGTGTCGAAAGTACATCTGAATGC
TAGCATACCTGAAAACTATGCCAACATTTTTTCCTATCTGGACCTTCTTTAAGTAACTAA
GTATTTTCCGGATAACAACTTTGCTTTAGCTCAAAATTGATCAACCGTTGTGCCAACAAA
TAGAGCTACAGAAATCAGTAAAGTATGTACTCATATACTCCTAGATTCTTGTGATTCGAA
CAATAAACTTCCAACGACAGGACTGCCTCTCACGTCCTCTAGCAGCAGGACTCCATCACT
TAAATCCTACTGAAGTAAAATTAGAAAGTGATTACTATAGGGTAATTATAGATTAACCAC
CAAGAAAAGAGGGCAAATACACAAGGAAAAATAAGCTGGAATATTTATCCATTGCTTAGT
GTAAAGAGAGAGCACATGCAACGATCCATTTTTATCACTTATAATTGTTTCTATTGTTTT
CCCTTCTCCAAATAACCTGGAAA