morexGenes - Barley RNA-seq Database

Contig contig_2556757

Source Contig contig_2556757

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2556757 (1336 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_2556757

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_40177	1	247 bp	MLOC_40177.1	Available	Available	None

CDS Structure of MLOC_40177

Contig Sequence (1336 bp)

>contig_2556757 1336 assembly3_WGSMorex_rbca.fasta
AACAGCAATGGTGGACCTTTGTTCCATGGGACAGAAGTAGGCAATAACATACCTGTATGG
AGTGTCTCCGCTATATTTCTTCTGGTTGACATAACCAGACATTAGCTTAATATAGCCGCC
GCCACACTCATTTTCCTGCTCAAACTTTATGGAGTACTGGACCACCAATGTTCGGCCTTT
GTTACTGAACTCCGGTATCTTGGCTGAGATAGCAAAATGCCTATCATCTATCGTTGTTTG
AATGCCTGGAATACACGAATAGAATACAGGGATTAGATGGTATGTAGAATTAAGGTAGCG
ACAAACAAGAGTTTATTTGATTAGCGCCCAAACCATCAACATCATTAATTAAACAAGAAC
TACTGAGGGGTGAGAACGCAAACCTTTGTCATCAGGGTCCCCAGAATATTTCCCTTCCGT
GTGCTTGAATGTACCGGCTTTCCCTTCGCTCCTTTTCCAATTGGGTTTCACCCAACGTGT
CTCCCAGCCATATGAAACATACAACAGTATGAGACAACTAGAAAGTACAGTACTAATCGC
ACAGAAGTGTTGTTCCATGTCGCCGCCATCAGTGATGAGGCATGTGTTAGGGAGCGAAGT
TACCAACACGCTGATCAATAGATCATTGTGTTATAATACACAAATACAACAAAATAAACA
AATAAATGTGATAGTAGTATTGCGTGTTTTTCGAGAAACAGGAATGTGACATCACAAATT
TTCAGCTTACAATAGAATACTTCGTGTTTCACGCGTTTGAGTATGATCACACAATTTAAA
TTAGCGAGTATCTAGTTCATATAAGATGTTAGAAGATATTACAAAGCTCATCTACTACAT
TATCAAGAGGTTCAGATATAGCTGCACACCAAGAGAGAAGTTATTAGATAAATATTTTAC
ATGGTGGCATAAGTATCTTGAACACCAAACATAAAGAAGAAAAGCCATGAGAACACCATT
TAGTTTTTGTACCTTCTTATCCAACAAACATTCCAATATGAAGAATTTGATTTCTAATCC
ATGGTCAAACTATCATCTTCCCTAGATAGAAATAGCAAGGGAGAAACAGATAAGATGTGT
TTTTAGTATTAGTGCAAGCAAGTTACTAAGATAAACCAGCAAGTAATGCATCTTATCTCC
TCTCAGGCCAAATATCATACCAAACCAGCAAGTAATTCATATTATCTCCCATCAGGTCAA
ATATCGTAACAAACCAGCAAGCAATGCATCTTGTAGTTACCTCGTACCCTTTGTTCTGAC
AAACTAAAGACTATCGGACACTTACATCTCCACCACACCAAACCNNNTCAGAGAATGGAT
AGGCAAGGGCGCCAAA