Contig Data
morexGenes
Links



Map Locations of contig_2556015 (2379 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2556015

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_40056 4 2125 bp MLOC_40056.1 Available Available LOC_Os02g55050.2, FRAME:-2, EVALUE:1e-158, 13102.m12463 protein OsFBX64 - F-box domain containing protein, expressed





CDS Structure of MLOC_40056






Contig Sequence (2379 bp)

>contig_2556015 2379 assembly3_WGSMorex_rbca.fasta
TTGTAGTTCTTCTTGTTTAATAATTACCCGAGAGTGTAAGCTGCAGAGAGATGTTTAATC
TAAAGAGAGATTCCGAGTATTTTTATCTGAGAAATACTATTTTGTTGCAGTATATGGACA
GTATTTTTATCTTAGAAAGTATATTTTTTCTGAAGAAAGATTTAGAATATGGACAGTATT
TTTATCTCAGAAATTATATGGACAGTATTTTTTATCTCAGAAATACTATAAAAGTATGAA
TGTTGCAGTATATGGACGTCATAAATCCCACATAAAAATTAACTGGGCTACCACTTAATC
CCACGTAAAAAGTGATGGGCAATGTGGTCAAGTCCAAGAGCGTCCAGCAAACAGCCCACT
TACATCCTGATGTCCGAGTCAGTTTGGACTTTACAGTATTTTTTCATATGTCTCATGATG
AGTATGCGTTACTCTGCTTGATGACTTTTGTCTGTGTTACTCTGCTTGATGACCTTTGTC
TGCGTTACACTGCTCACTGAGTTTTACCTGGTCCATGCCATTAGCTTCCATTCCCGACTG
CAGTAACCATGCAAGCAAGCACCACCTAATACTACTGGGTAGCTAAAATCAACACCTTTT
TGCGTCAGCGATAACCCTTTTTTCCCTCGATAATTGAGCACTCTGGGTACTCCATTTTTG
CTACATGACCAGGCCTCATCTCACCATAGTGAAATATCGCAAACGACTCGATCCCAGTGG
TGAGTCTCTTCTTCATGGAGATCCTCTGCCTTTTAGTCCAGGGGTACCTGCCAAGCTTCC
TCTCCTCGCAACTGCCACACTCCAACCTACTATACAGGAACACATCCTCTAGATTGACCG
CCGCCACCAGAACACGCCTCAAATAACTCACAAAGCAATCTTCAGATTCAAAGCCAAAAA
TGACGAGTGTGGCCAAACTTTGGTGTTGGAAATCTGCTGCCACCAAGTCCCACTCTACAC
CCCTGTTCTCACTATACAAGTCTTCTTTCCTCTTCTCCTCGTCCATTTCCATATTACACG
CATGATCCCATACCTACATGCCAGCAAAAAAGTGCAAGGATAAAGATAAATTGTCAATAG
AGCATATGTGGCAAAAGAGACATCTTTACGTAAAAGAGACATCTTTACGTAAACACATAC
CGTCATGTATAGCTCCTTCAGTAAGGGCGCAGCTTCAAGAAAATACATTGTCCACGTGAG
ATCATACCCTTCAGGAAGATGAAGTAGATTCACAAACCTTAGTTGGCGGAAAACAGATGC
CAGACATGGCGTCGGACATTCTGGCTGTACCCAAATCTGCAACGGATAAGCACATGATGA
GATGGGCAGAGAACAAGTCAAGCCACAGTTCACAAAGTGACAATCTCGACATACCTTTTC
AGAATTAAATGCCAACTTCAGATCTCGTATAGAGGTACCGCTAAGAAACTCACTTAACAA
CACCATCTTGTTGAAACTAAAGGCAAGATTTGTGAGGCTTACAACCACCAGCAATGGGAC
ATGACCAATGAACAGTGGATCTTGGAATTGTAGCCAACCATCAAAGACCATTGTTGTGAG
TTGAGGGAGCCAGTTCAGCTCAACTCGTTGAAGCATACAGTGGATGATACTAAGCTCACT
GAGATGAGCATGTTCAACTTGCAGCGTGCTGCAATCACCAGAGTCACAATTGTACAAACG
CAGACGCTTCAAGCGCTTGCAAGTGATGAGGACATTTGATATGTCTGGTTCACCAAATCT
CAAATTCTCTAGGTCAAGGGTAGTGAGACCACCAAATGCACTTGGACAGGCATCAAAAAA
CAACATGAAATTTCTCGCAGAGGTGACCAGATCATGCTCAGCCATGTCACCATTGTCATA
CTTCCCTGTCATAACAGTGAATTTGGCATTCTCAACCAAGCTTGCCGCCATGGCACGACC
AACAACACGCCCAATGGATATGGGGACATCATCTCTCAAGTAAAACATTGTGGACAGAAG
GCGGATGGTGTGCTCTCCAGGATTTCTGCGTGTCAATATGCTATCTGTCGCTTGAACCAC
AGCTGCATTGATGCGAACCAATTCATCATCAGAGATGTCTGTGCACAACACATCCTTGGG
CAGGAAGTCCAGAGCGCTTATTATAAGCCGAGACAGCTTGGCACAGAGCTGAGTCCACCG
TCTTGAGAGGATGCTAGTTCTTGCATTCTCACGGACATTGAGTCGGTCAAGAATGTTGAC
CAGAACGTCGTCAGGCAATGCGCTGAGCCTATCAACTTTCTTGACAGGCACAAAGACAAA
TAAGAGTTTATTTCACACTAGTGGTAAAAATATACTCCCTCCGTCCCAANNNNNNNNNNN
NNNNNTTGTACTAGCTCTAATACAAAATTGTACTAAGCT