| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2556003
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_40054 |
1 |
389 bp |
AK363904 |
Not available |
Available |
None |
CDS Structure of MLOC_40054
Contig Sequence (3691 bp)
>contig_2556003 3691 assembly3_WGSMorex_rbca.fasta
ACGCCTCACCCCGCGCCCACGGGCGTCGCCGCCGGGCGCCCGGGCCCCCCCCCCCCCCCC
CCTTCCGCTCCCCGAGGCCGGCCCGGGAGATCTCGAGCGGGCGACGGGAAATGCGTGCGC
CTCGAACGCGCGCCGTCGCCGGGAGAGATCCTTCTGGAAGATTCTGGAAGGGCCGCGCGG
AGGAGGAGGAGAATGGTTGGCGGGAAGGAAGGGCGGAGAGGCGCGATTCGGTGGGTGGGG
TCGTCGGCGACGACGTGGTTGTGTCGCCGCGGGGAGGAGGAGAAGAATGGTTCGAACGCC
TGCCTCCGCCCGGAGATTCGGGCGCGTGTTGACCTCGGGATCACGCGGACGGCGGGGATG
GGCTCGGTGCAGGGAGTGGGTCCAGGAAGTGGTCGTTGGCGGGCGCCGGGCGTTCGGACG
CGCCGAGAGCCGTGGCGGTGTGGACCGGGTCCAGTCCACGGCGCGCGCTCCTGATCCCGT
GCTCGATTTGATCGTTGGCCGCTACTGTGGTATTCCAAAATGTAACCTCGTGATTTGAAT
ATTATCATTCCGCGGCAGGCTGCTCTCGACGGCAAAAAATTTCCTCGAAAAACCCGATGG
CTGCAGCATTCATGCATAAAGAGGATAAGTTTGTTTATGGAGCGAGCAAAGTTTACTCCC
TCCGTCACGGTTTACAAGACATAGTTAAATTTACGTGCGTTTCTAAAATAGATAAGATTT
AAGGCATGAAAGCAATTACTTTTATTAATTAGTACTACTACTACTCATGCATGCGTGCTC
CCAATTTGCTACTCATACATTAATACTAGTATTTTTTCAGTTATTCGATGCATTAGCATT
TACACCTGCTACATTTCACAACAAATCGATGACTACCTTGGTCCCAGAGATTTTTCAAGC
GTGTCTTCTAAACCGTGACGTAGGGAGTATATGAAGTGAATTTTTTTTCTACAACAACCA
CAATCATAATAGAAGAATCAATTTGTTAGCCCCCTCGTCCCCTCCTAAATTCGTCCCTGG
CTGATGGTGTGCTCATGACACGAGAATAAATATTATCATATGGTGACCGGGCATTCCCAA
AATCTCCTTTCAAAAACCATGGTAGACATATCCAATTATTATCATTTTCATACAAACTCA
TGCAACATCATAATTTAAATAATTAATACTACCAACTATTAAACTACTCGACCTCGCCGT
TGGAGATATTGACGGTGTTGGTGCCTGAGATGCGTGCCTCATGGCATTGGCGGTCGGGCG
CACGCCTAACTCATCCTCGTCCTTCTCGTCAAGCTCGGTGAAGAGCTCGTCGATCTCTAT
CGCCCGATGGCGAAGGATGCGGTAGTTCGCTTCGACTCAAAGGACATCAGAAGGGCCTGA
TGCTCCGCCAGCTAATGTGGTCACACGGTAGAGGTAGGGTCACAAGACATGATGATCCAC
GACCCCACATCGCCAAGACCTCAAAGTCATGAACCCATTCGGACAAACGAATAAACATAT
ATCACTCGAACGATCATGGATCCACTCGGTCGCTTCTCAAACCACTCGAGTACAGAAGAC
CAAAGGCCGACATAGGATTTGTAACGTCTGAAGCTATGCAATTAGAGGCATTACTAGTCT
TTATTGCTTCGGTTACATGTAACAACTCATGTACTAATAATCATCATAAACATCTCCACG
GTAATGGGCTAGGCCAAGGCGTGATGCACTCCATTACGGGGGTTCGCAATACTTTGTAAT
ACTCACACACAAGAGAAAAACAACTCCTAGAGCTTGAGACATAGGATCTTTGCCTCTTCC
GAGAGGGGTCTGAACTCATAAAAACCCCTTGTCACATCATTGTCGTAGCTAGACCACGCT
CCTTTATTCTACCCTTCTCTTACTATTAGAATCATTCACACGACATTTGGCACCACCTTG
GGACTGCGCGTCTAGCGATATACGACGCGGGTGGATTTTTTCGCCATCCGGCATGGTTTT
CGATGGTGAATTAGTGTTCAACGGCGAGATCCGCTTCGGCATGCTCAGCTTCATCGCCGA
CGATTTAGTGTGGCTTCAGGGAGACCCGCTAGATGCGTAATCACTATCCATCCATGGTGT
AACGCATTTCTGCACGAGTACGTTCAGGGTCTGCCTCTATCAGCCATCGATCCCGTACCA
GACGCCTGCACTCCCTCGCTGGACATCGCCACAAGCACTCCCGCAGATCGCGATGTAACA
GCCTGGGACCGATGCTCGAGATGCCTTCGATGTATTTCGTTATTGATGTGCTATTTATTT
GTTTGTCGCATTCATCATCGCATCATTACCATTGCATGAGCACTCCATTGTCTTCCATTT
TCAAGACTTACATCTCTTAGTTGGTACCGGTTCTCCCCGTTCTCATCATTAATCGATTCG
TAACCATACACACTCGCACGCGCCCATGGCATCATTAAAATATATTTTTATAAGTGGGAA
TAAAATATTCTTGGAGTGGGTTGAAAGTTTGTATGCGATTTTAATATATTACAGGTAGAC
CGCATACCAAATTTCATCGCATCGAAGTTTGTTCGATATTCGAACCATTAAACTATAGCG
ACACTACCGCTAGTCAAATTGTCGAAAGTTTTTCGTAATAACACCTTGTTATCGGTCTGC
CCGCATTTTCCTTCTGTGCTAAATGTCTACCCTCTCTTCAGTGTATATACCCCTCGTGTG
CGCGTGATAACTTCCCCAATCCCGAAACACTCATTCGTCACACGCAGGTCCGGATCAACC
TAGATATACCCCAAATATCTCACGTTTATTCAATATAACACTCGATTAATCCAGAGTCAT
CCGGTCGAAATCTAAGCATCTAGATTAGCCCCAAAGCCTCTCTTTTGCTCCTTCATATTT
AAGAAGTGCAAATCATCCAAATCGGATAAAACCCTAGTTCCTAGGCCTACTGTCCCATCT
CCTCCGCCATCGGCATTCCGCAGCCAACCATCGCCTCCCACACACCCTATCCATGCACCC
GGTATCCTCCTCCTCGGGATCGACCCAGATCTCAGTAGCCAACCATGCCCTCCTCCTCGC
TCAAATCCCCCATAGCCAGCCACCACTTCCCATGTCTCCTGGACACATCCAGGCACCCCA
TCCACCGTCGCTTGCGTGACCACAAGAGCAGGAACTCCTCATAGCAGCGCCTGGACCTGA
GATGTTGTCTCTCGTGGAGTCGGCAGCCACCCGTAGCATCATCCCCATGAGCATGTGCGC
CCGTGAAAGCACAACTTCTCCCTAAGGTGGTTTTGGTAACTAATAACAACATATATGTCA
TTGATCTAATGACTCCACCTAGTATATTTTAGGAAAACTTCAATGACGCATTGGCTAAGG
ATTGTGAGGAGAACCCCCTAGATGCAAGGAACATCTATTGGCAACAAGCTTGACGACCTT
ACATTTTATATTTTGTGAGAAATCACATTTGAGTTCATAGAAAAGCCAATACTATTAAAA
GGGGATGAGGCGACTATGATGATCTGGTTGCTCAAGTNNNNAGAGATAGCCACAAAAAAT
ACTCATTAAATTCTCCCACAAATATGTTGTCAAAGTCCACAAAGACCAAAATTTGGTGCC
ACCAACTTTCCATTCGGCCCTACCGAGTTTTCCACCAGAAAGATCCCATGCCAAACCCTA
GAGTGTCGGTACCACCAAGTGTCATTTCGGT
