Contig Data
morexGenes
Links



Map Locations of contig_2555821 (5062 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2555821

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_40016 2 1649 bp AK376048 Available Available None





CDS Structure of MLOC_40016






Contig Sequence (5062 bp)

>contig_2555821 5062 assembly3_WGSMorex_rbca.fasta
GGCTACGGCCGGGTGTACACCGTCGTGGTGGTGAACTGCCCCTTCTCGTCGGCGCCCAAC
GCCGACAATGCCGGGGGCAGGCTCGTGCTCAACGCCTACTACGGGCCGTCCCCGGCGCGG
TACGAGCGGATCGAGGCACTGGAGGAGGCGCCGGGGGGCTACGACGAGGCGGCGTTCCGG
CCGCCGCACCGGTACGACTACCTCTACTGCGGCTCGTCGCTGTACGGGGACCTCAGCGCG
GCGCGGGTGCGGGAGTGGATGGCGTACCACGCGCGCTTCTTCGGCGCGCGCTCGCACTTC
GTGTTCCACGACGCCGGCGGCGTCGGCCCCGCGGTGCGCGCGGCGCTCGAGCCATGGGTG
CGCGCCGGCCGCGCCACGCTGCAGGACGTGCGCGCCCAGGCCGACTACGACGGCTGGTAC
CACAACCAGTTCCTCGTCGTCAACGACTGCCTCCACCGGTACCGGCACGCAGCCAGGTGG
ACCTTCTTCTTCGACGTCGACGAGTACATCTTCCTGCCCGACGGCCGGACGCTCGACGGC
GTGCTCGCCGAGCTAGACCCCTACACGCAGTTCACCATCGAGCAGAACCCAATGTCGAGC
AGGTTGTGCGCGCGGGGCGCCAACGATTCCATGGCCGACTACTCCAAGTAGGTGACCGTT
TCCTGCACAGAATTTGATTAGTTCAGTGGAAATGTTACTCCTTTTACGCAAACCATTGCT
GCATCGTTTGTATTTGGCATGTTGATGCGACCTTTTGAACAGGAATTACCCAATAAGGAA
CCTTCATGTGTCATTTTCCATTGACACCCTAATCTAAGATCACTGGAGCCGGACATTTCA
TTTTTGTGCCATGTTTTCATTTTCAGTTGCTCTAAGAACAGTTCAGTTGTACTAGTAATT
TAAGTGTACTTCTGGTGATGCAGTGTCTGAATCCTGCCATGTCCTACATCCAGTCTTACC
TGTATTACTTCTGTTACATTTGTCGATGCATGGTGTATCTGAAAGACTCACTCCTCTTAC
TGAACATTTTTGCAGACAATGGGGTTTTGAGAAGCTGGTGTTCCGGAATTCGATCACCGG
GGTGAGGCGCGACAGGAAGTACGCGATCCAGGCCAAGAACGCATACGCCACGGGCGTACA
CATGTCCGAGAACGTGATCGGCAACACCACTCACAAGACGGAGCACCTCATCCGGTACTA
CCACTACCACAATACCATCAATGTTCCCGGCGAGTTATGCCGCGAGATTGTGCCCGTGCC
GCCCAAAGGTGGCCTGACGTGGTCGGAGAAGACGCCCTGGTACTACGACGACAGCATGAA
GCTCGTCGCAAACGCGGTGCGGGAGTTCGAGAAGCGAAACATTGGCAATGTGCGTGTGTG
AATATGGCATGACAAAACATCAGAGAACGGACTGGTGTATAGCATTGCTGTTGGCCGTCC
ATGAAGCTTGGCAGGGGTATCCCTCATGCTGTGAACCTAACAAACAAGTCATAGTTTGGA
GCTTGTGAGCTGACAGAGACGCGATGAAAGCGAAGCCGCAACCCCAACGGCACGGCAGAT
TGTGTGCTACTGCTGCAACCCTGGTGTTGATCTGCAAAGGTGAGAATTGTGTATAGATAT
TAGAGACATCTCATCCGTGTAAATCTCATTGTTAAAACTATTCTCAGTCATATTCATTGC
ATTCCATTCACTTAAAGCACCCAAGGTTATAATAGCTTTCTTCATCAGCGATGATGGTGC
ATTTCTAGAGTAGATTGTTGCAGCTTGCAACTTCCTTTGTTGACTATATATGCCACAACA
GTATAACCTGCTCTAGCCCTAATTTTTGTTGGATCAACAAGTTAATGTTTAAAAGCTCAG
AGTAAATCAGCTGTCTTGTCGCCGCACATTGGAATACTTCGTATCGTAGGGGTGTGAAAG
GTGATGGCGATCAGGACGGCTCTGGATTTTCTTGCGGCAAACTCCTAAAGTCACCAAGCA
ATGCCATAAATTTTGCAGCTAGAAAGGCAAAGGCAGGCAGGGGACCGTGATGAGATGGGG
CACGGTTGCATGCGCCCATGATTGCATGATTGGGGAAGGTGGCCTGGCCTATAGCGATAG
CACGGGAGGGTGCTACTATTGTCCTCCAGCTGCTGCTACATTCTTTGCATCGGCATTTCG
GCCTGATGTTCTGCTAGTCGTTTGGTGGGCCGAATTCGCATTCCCGATCTGTCGATATGT
GAATAATGCTAGCATTGTGCCATTTTTGCTACATTGTCATCGCATCAGGTTGTAAGAGCC
AGTTCCTGGTTATTTTCCGTCTCTTCATTGGTTTTTCTGCTGCATCTTCTTGTTCGGTTT
TTGTCTGTTCTTTCAGTTCATCTAGATGAAAATAAGTTACTTTGAACTGGCCTCTTCATC
TGGAATACTAAAAATTTAGAGCCTTCTTAACTGGTGATGACCACTAGTGAGAAGCTCGGA
GCAATATACAGGCTCTCAATACGCAAACCACTACTTACATGCCAGTTTTAGCACGGAATA
GCCGAGTGCTTCCAAGATGCAGGGACAGGCTCTGCACCAGAATTCAGAAAGTAGCAGTAG
TGCTTAGTAGGACCAGGTTTCAGCTTGTGGGACAATTTTCTTGTTTTAACCTTTGAGGCT
AATAAAATCCAGATCTGATCTCAGTTTAATTTTCTTTTCGATTCTAACCTTTTTAAGTGA
CGCCAACATTCCTGACGTTTAGCTTGCACTGGAGACGCTAGGAACCATGGCGTCTGGTAT
AAACCCGCTCGATTCACCCCCTCGTTGACCGGCTGACGTGGCAAAGGGCCAGACGCCAAG
GACTCCGGCGTCTGGGTCTGAAGACCAGACGCCAGGGACCGTGGCGTCTCGATGGTTCGA
TCTGTGGTGTCCCTCCTGTTGTCTTTCAGCGCGCCCAGACGTCAGGGGCTTTGGCGTTTG
GCCCGTGGCACTCTCAGCACGCCCAGACGCCAGGGGCAGTGGCATTTGGGTCCTGAATCA
GGGCTGGTATATGTAATGAAGGTTTGGTGTGAGTTTCACCATACTCACTTTCCCCAATCA
TCTACCCGAGCTTGATGCTTCTATTCTCCTCTCTCCTACCCCTCAAGGCCCCCATCGAAT
CCTCTTCAAAAGGTGCTTCCCTTACATGGATCTTTTCATAACTTTGTTGCTTGTAGAATC
TCCTCCGAATCATTCAATTTATTTTAAATCTTCATATTATGCTTGATTTTTTACATCTTA
GAGAAACCCTAGCTCATCCTTGGTAATATATTTGATTTATTTGTTTTATGAGTAGAATTA
TTGTGGTTTATGGTTAGTTAGTGTTTATTGAATAGTCATTTTTTAAAATACAGGATGAGG
CTGTTCATTTATGTTGAGGTTTCTGTTGAGGCGGCGGCGAAGCGTGAACGCAAATTTATT
GAGGAAAAAATGAATCACTGGATGGTAGCCGTTGATGCGTTGAATGCGGTGTGTAAAGCC
TTTTTAAACTACTATTTTTGTAAGGACGTTGCGAAAAATTTAATCGACAAAAAGGAGAGC
GAGATTACCAAGCTCAAAAAGACAGAAAAAGATTGTAGGCGTAATCTTGCAATGCATGTT
GCATTCTGTGCAATAAGGGAAGAATATGAGCAGTTTAACATGAACAACCATGGTCAGGTC
ATTCATTGGTTAGTGAGACAATCTTTATCGTCGGAACCGAAGCAGGCATCTCGTTGGGCA
TGGGTCAAAGAAAGAAACGATGTTCTTTGCTGCAATCTGGGACCTTACGCCAAATAAAAT
GTATGTTCATTACCATGAGCCTATGTAATCTTTGTAATTTGGAACTACAATGACATGTAC
CCATTTGCATAACTTGTTCTCATTTGAACTATGAATTCTTTATCATTTGAACTCCATGAA
GATATTGGTGTTGTATGTCATATTAAACTATGTAATCTTTGTGATGTTCTATTGTTTGAA
CTCCCTGAAGATCATTTGTGACATACTAACTATCATTGGACACTCGACAACGTAAAAGAA
TATCATTGGACACCTCGCCCGTCAAAGAAGATTATCATGCGTGCACATCTCGTTGATGTT
GAAATCACGATCATTCTCATAAGGCCGCCAGAAAACCTACAATAGGACGAGCTGAGATAT
TAGGTACACATTCTCATAAGGCCGCCAGAAAACCTACAAATAGGAGGAGCTGAAATGTTG
GTTGGTACCAGCTCAATAGTTAAGGTGTCTAGCTCGTTCACATAACACTTGTATCGCACA
TGAGAGCTTCCGGTGTAAACAGACACCTGATCCCAGAAATAGACAATTGTGGGGCGACGA
TATGGATCTTGATCATGAAGCCCTTCACGCGGATTGGGGTTTGGCTTGTCGGTCTTGAAC
ACGGGCCGTCCAACCAGCAACCGCTCCCGCATCCACACAGAGGGGCTCCACACAAACCCG
CACAATGAAGATGTGTCTTTTGTCCTCGTTGACGCCTGATCCAACTCAATTAAACACACA
TATGTTAGCAGTGTGTGGAGCATGACAAATGAAAGATAAATGTCTGCAGATAGCTCTTAC
CTGACGATACAAGTACACTAGTGCTGCTGAACCCCAGCTATACTGAGTATCCCAGTCCTT
GAGTAGCTCCAAATACATCCAGAGGGTTGAGTTTCCAGTTGCGTCTGTGAAGACCACTTT
GGTTAGCACATACCAAACATAGGCCCGAGCATACTGCTGCAAAACCATCTCATCGGCATC
CGCAAGGCATGGATTGTTTGCTCCTCTGACTTCTTTTAGCGAGGTATGCTTCACTTTCGA
GCTATCAACCTTGTCCGGCAGAGGGAGAGGGGGCAGAACACAGATTAAATCACCAACCCG
AGTTCGCGAGTTAACGACACTCACATGACCCGTAATAGCTAAGCCGTTAATCGGAAGGCC
GCTTATCATAGCCATGTCCTCTAGAGTCATCGTCATCTCCCCACAGGCAAGGTGGAAAGA
ATGTGTCTCGGGCCTCCAACCATCCGTAAGTGCGGTGAGCGCTGCATGGTTGGGAGGCGC
ACTAACTTCGCCTAGCATACAT