Map Locations of contig_2555748 (3854 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2555748

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39993 1 571 bp AK367417 Available Available None





CDS Structure of MLOC_39993






Contig Sequence (3854 bp)

>contig_2555748 3854 assembly3_WGSMorex_rbca.fasta
GTCAGGCTTATACCCACGACAAATGTCGTTTTGTACCATTGAAGTAATCTAAGTCTTTGT
ATTGGCCTGATCCAATGACGAGATTAGTAGGATCTGCTCCTTGTGGTGTTTTTATATTGG
CGTATATATATATAGATCCTCTAATCGTTTTAATCAGTTTTCTTCGTAATTTTATTTTTT
CTCTTTTTAATTTTCTCAAAAATTTCCTTCCGTTATTCCTTGTTTCTAATTCATGAATAT
TTTTTAAACTCATAAACACTTCTTCAAGTTAGTGTTCCCCTTAAATCATGAAATTTCTAT
AAACTCGTGAATACTTTATAAAATTTTATGAAAACATTTTTGAATTCATGTGCACTAATA
AGATTCAAGAACATCTTTTAAATTCATGATTTTTTATTTCAATCAACATTTTATTATATC
CGTGTTTTTTTCCTGAACTTGTGAACTTTTATTCAGATCAACACAATATTTTTGTTTGTG
ATCATGTTTAACAAAATTATGATTTTGAAAAATTAGTCAACATTTCTTCAATTTATAAAT
GGTTGAAATAGGAAAAATCAACTTGTGTCAAATAGGTTGTCAACCAGGCAAGTCATGTCA
GGCCCCAACCAAACAACCTCGGTGTTTCGTTGGAAACTTGGGCACTATGCCCGTGTGAGT
GGGCTGTCGTGTGCGCTACAAACATCAAAACAATCCAATTAGGCATGTAAGCTCCTAATA
AGGCCTAATAAGAAATGGTGGCCCACGGGATCCCAGAGGTGGGCGTGGGCAGTTAGCCGG
GGTCACCGGGCAATGGCGAGAGCAACTAGTTAAGCGCTTCTTTGGGAGGCTTTCAGCTAG
CACTCTCACGCGCCGTCACTTGACGCGTTTTTAGCCGTCGTCACTTGTCGCTCTTTGAGC
GCTTTCTTGAGTTTTTTTTCGTATGCGTTATCTGCTTTTTGGATTGGATTTTTCTATTTT
TTTAGTGTTTCGGTTTTTCACAGGTCTTTCTTATTATTTTGATGATTTTTTTTGCAAAAG
GACGCGTTTTTTGCTATTTTTTTCGTGAGAGGCACAGTTTTGCCTTTGCGCCATGCGTCT
CGGAAATGAAAAAATTGCGTTTTTAAGAGGCATAATTTTGTTTCCGCGAGAAGCACGGTT
TTGTTTCTGTGAGAGACACGGTTTTGCCTTCGCAAAAGGAACAGCCATGCCTCTCAAAAA
TGTAAAAAAATATTTTCTGTTTTTTTCCACGAGAGACAGGATTTTGCCATATTTTTTTTC
TGTATGAGGCGAAATTTCTTCAAGATCTGAACACACGATTTAGAAGATGAAACAATTTAA
AGATACGAATTTAAAAAAAATAAAAAAAAATTAGATTGCGACAAATGACACGTATGAAGT
GCGTCACTTATTGTAAACTGGGAAGATGAAAGTGATCTTTATAATTATATTCCTCAATTA
ATAATTTCGGGCATGGCTCGAAATAGGAGCAAGGACTATGTCACACTTATTGCAAGATAT
AGCCTGGCCCACCTTTGGCGCTCCTTTAAACGGGCGGGCGCAACACTGTAGTCCCTGGGG
CAGTTTTGGAAAAGTTCTATGGATCGGTTCTAGAACCCTCGATGTGTTTCCTCTTCTTGT
TCTGTTTCTACTCCCTCCGTTTTAAAATGTAAGACCTTTTTAAAGATTTTACTAGGAGGC
TACATACGAAGCAAAATGAGTGAATGTGCACTCTTCTAAAAAATTCTATATCCATATTTA
GAAACGGAGGGAGTATATACAAAAATACTACACTTACGTAAAACTTTTACGTAATGTTAC
TTAACTTTTCTAAATAATCTCTCCTCCCCCCTCCTGATTTCAAGTGGGTGAGGCTTTTTC
CTAATTAACCTCAATTAAAAGAGGACACCTAAGCAACTAGGTTAGTTTACGTAGCTACCC
TACGTAGGTGTAGCATTGCTGTTCTATATATGTGTTTTATCAGGTTTCTTTGTATTGTTA
AGTTTTTATTCTTTTTCGTTTACTCTTCTTCAAATACATGTCAACCTTTTCAATATATGA
TGTAAAAGTTTTGTATGCATGCATAATACTCCCTCCGTTCCTAAATGTAAGTCTTTTTAA
AGATTCCACTAGTGGACTACATACGAATGTATATACACATACTTTAGAATATATATCCAT
TTATTTTGCTCCGTATATAGACCAGTAGTGAAATCTCTTAAAAGACTTATATTTAAGAAC
GGAGGGAGTATTATCCTAATACACGATTTTGTTTATTACATGGACATTTTATTACATATG
TTTTCTTACTTTATATTACTTATTTTCAAAAAATACCGTTAATATTTTTTGGGACATGCG
AACATTTTTGAAGTGTCATATACATTTTCTTGAATGGTACTCCCTCCGTCCCAAAATTCT
TATCTTACATTTGTGTAGATATGAATGTATCTATTCATATTTTTATATTTAGATACATTC
ATTTCTAGACAAACCAAAGATAAGAATTTTGGAACGGAGGGAATACAAAATAGTATATTT
ACATTTTACAAACATTTCATATCATTAAAAAATGTTCATGGTTTGAAAAAAGTTCACCCA
TCTTAGAAAATAGTCATGACATCAAGATTTTTTTGAATGATGTGAACGTTTTTGAAAAGA
TGTGGGAACATTTTTTATGCTGCATGAACATTTTTGAAATGTGCGACCAACACCTTTAAC
AATTCATATATACTAATTACATAAATATATATTATTTAAAATACTTCAAAGTAAGTATAA
TAAATTAAAAATAAAAACACTAGGCTCCCACGTACAAGTGCGCGTGCATGTGCTCCTACG
TGTTGGCAGAGTGCCGCTGCCTCACACGTTGGACCTGGCCCAAGTAAGGGATCGCTGTGA
CGTGTGAACGATGCTTCTTCGCTAGCGCGAGGCATAGCAGAGCGAGCCCCCGGAAACAAG
GGGCTGCCACCGGTATCGTCAGCCCACAGCAAACGGCTTATCCTCTGCTGCAAGCAAAGC
GCAGGCAACAACCGGACACGAACGAGACAAACCTGTCGTGTACTGTAGCAGCCTCGCACC
GTGTCCTAGCGCTGAAGCACGACGTCAAAGTTCAAACAACGTGCGTGAAAACGGCGACTC
TGCTCTGCTCCCTCAACGTTGTTCCCCCCGAGCGGCCGTCTCGGCGCCGCCTGCGGTATA
TACGCCGGCGAGGCTCGACCATGCGGTCTGTCGGCCTGCACTACAAGACGAACGCCGGAG
TACTGTGGATGATGGGTGTCTTTCTGCTCTAGGAGGTACCTTGGCCGATCACAAGGAACT
GTTCCATTGGTGCAACATAGTCGACTGAAACGTTCTATTTACATGAAAAGCTTGTGAAAT
CACATCGGGGCATTCACCGGTTACAAAACTGACAAAAATGAATTCAGCGGAACAACACAA
GGGAAAATCTTGACTCAGTTCGCCGCGGCCAGCACGGGCACGGCACGATGATCAGAGCCC
CAGAGGCCCCGGGTAGTAGTAGCTGTCCTCGAAGCTCCAAAGCTCGGCCGGCGCCTCCTC
GGCGGCGGCACCGACGGCGGCCGCGGCCCCGCCCTCCATGTAGGGGACGCCGAGGAAGCT
CATGTAGCTCTCGTACGCCATCAGCTCCTCGGACAGCGCCTTCACCTCCTCGCAGGAGCA
CGGCGCCGCGGGCTCGACTCCCTCCTCTTTCTTGGGGGAAGGGAGCACGGCCGGCGGCGG
CGCGGCCGCCATCGTGCACGACGCCTGGTGCGCGGGCGCGCCGGCGAGGATCTCGTTGGG
GAAGTTGACCTTGGCCTTGGCGCCCCTGATGCGGCGCGCGGCGCGGTCGTAGGCGCGCGC
GGCGGCCTCGGCGG