Contig Data
morexGenes
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Map Locations of contig_2555626 (4165 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2555626

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39957 2 2690 bp MLOC_39957.1 Available Available LOC_Os01g20970.1, FRAME:+3, EVALUE:2e-61, 13101.m02229 protein invertase/pectin methylesterase inhibitor family protein, putative, expressed
MLOC_39958 1 654 bp None Available Available None
MLOC_39959 1 824 bp MLOC_39959.1 Available Available None





CDS Structure of MLOC_39957






CDS Structure of MLOC_39958






CDS Structure of MLOC_39959






Contig Sequence (4165 bp)

>contig_2555626 4165 assembly3_WGSMorex_rbca.fasta
TGCCTCTGCACCGCCATCAAGGCCAAGGTGCTCAACCTCGCCCTCTACGTGCCCCTCGCC
CTCCAGCTGCTCGTCAACGACTGCGGCTGCGCCGTGCCGCCGGGATACACCTGCGCCTGA
TCCGTCCGTCCGTCCGTTCCACGTTCCCGCGCATGCATGCAGTGCAGTGCATAATTTATT
GTGCCACGAGTTTGAAATCAAGGTTGTGTCGATGAAGCCACTCGCTTCCGGTTTGTTCAT
TTAGTGCTACTACAACATTTATTTTATTTTTATTATTATTGTCATCATTCCGTTTGAAAT
CTTGTAAGATTTGTATATCCAGTGGCTATGGAAGGTGTAATTGTATGTTGTGTACTGGTG
TCGATGAGCTCAAACTATTTATCCTGGTGTCTGATGTGATTCCGGTCTCGTCTGTAATGT
CCCCTTGAACAACAACTTCATTTTTCTACTGATTTCAAAAAGTGACGATTTCTACCCATG
GATTACACTATGATTTCAAAAGGTGATCCGTTTTGGATCTTGGGCTCCAAGCCTCCATGG
GGCCCGATCTTTTAAAAATTCGAAAAAGAATCAAGTTTCAGAAAGAAAAAAACTACATGT
ACATATATAGATGTGTTCTAGTACATGCAAATCATGATGGTTAGGAGGACGGTGGTATAC
TTTTGTGCTTGTATTTTTTTAATTTATTTCAGGTCTTTCGGCAATGTGCTTTTCAGTGGA
AGGAGACGTTCCCGTCGACAACGATGACGTCGGTGGCGACTTCGTCAATCTCAAGATGAT
GTGTCGGCTTAGTCTCTCGAAGGTGCTCCTAGGGGTAGGGTGTGCGTGCGTGATTGTACG
CTCGTGTGTGTGAACGACTTCGATTGTACTCAAAAAAAAAAGTACATGTGTGTAAATTTT
CACTATGCTTAAGACGTGACACAAAAAAACATGGATTTTTAGCACATGCGCTGTTCGCTA
TTATAATATCCATGAATTTCTTATTTTCGTGTAGCTCACATCTTAAAAGTATTTCACTCT
ACATCCTTCGTGTGAATTATTTTTATCAAAAAAAAGTTCAAAATAACAGAAGACGTGGTA
CAAAAACGGTTACAACAGAGGACGTGGTTCAGTAAACCTATCGAGCAGCTAGCGGTATTC
TGACAGCATTTTTTATAAATGAAAAATAGGCAGTGGTATTTATCCACTAAAATCATGTAC
TACGACTTTTCAATATTTAAACACGGGCAAAAAAAAAACAAGATTTACAGAAGAAAAGGA
ACTCGTAATATAGTGAGATGCGGTCCATGAATTAATTTCTTCAGCACGACGGTAACAGGT
TTTAACGTGTCACTTATAGCTCACTAAAGGTAGCACCATATTCGTATGTACAGAATCGAA
CCCTACCACGCAAACGAGCTCCCGGGCTGAGGCTATTCTCCTTCCACCTGAAGCTTTTTA
AGATGCCTATATATCTCTGCAAATCAAGAGCTAGCAGCAGCAGCAGCGGACTCCAGAAGG
CTCAGGTACTCCGCGATGGCCTGCCCTTCGTTGGCGACGTCGATGTCATAGTCATCCAGG
GCATCACCCGTCAGCTCGTTGGCGAGCTCGTTCTCCATATCCACGTCCCTGGCCAGAGCT
TGCCCGTGGCTCGCACCCGCTTGTTCCTCGATCAAATACTCCTCAGTTTCATCCTCCTCT
GTCTCATCGCCCATGTCTTGGTCTTGGTTGACAGCTTCTTCATTGGCCCCAGCTTCCGCA
TCGTTGGCGGCAGCTTCTGCGTCGTTGTCCGCAGCTTCTGCGTCATTGGCCGCAGCTTCT
GCGCCGTTGTTCACAAGCTGTTCCTGATTGCCGCCCTCGGCAGCGTTGAGATCCGGTATC
TGTGGTGGAGCATTACCAGCCACTGCAGCAGCCACAGCAGCGGCAGGCCCGGCCCTCAAT
GGTCCTGCACCCAAGACTGGCAAGACACAGAAGGGGGTGTGAGTCTATTTCATCTGCCAC
AACGCAATTCAGAAGAGCAATGATGAACCCATACATACCATGAGATGGTCGTTTCCTCCT
TGACTGAATTTTACTCTAGCGTGGAAATTGCAGAACAAAAGGAAGAGTTAACAACTGCAG
AGCATCTTGGTAGGATAGGAGTTAAAAAAAATAGAGGCAAATAGCACGTACTTGTAGGGC
ACAGTTCAGTTCAGGATTTGTCAAAAGATCTAATGCTTTCTCAGCATCATTTTCGTTTAT
GCGGAGTGCTTCTGCAGCAAGGTACTTCTCAAACCTGCAAAAATTAAACTCATTGGTTAC
GAAATAGGAGAAATATCAATATAGCCGTGATCATGTAATATTAGTTTTACTGCCACCACG
TACAAGTGGCTGGAATTATTTTGCTTCTTTGATTCACACAGGCACAAAAGCAAAATGCCC
GAAAACAAGAGAAAAATGCAAGTGCTGTTCAGAATTGAGAAATATCATAAGTTCAGACTT
TTCCTTGTGAATCATGGTATAAAGTTTCCTATAATACACAGTATCCACAAGACGACTAGA
GACATTTGTAAATAATAAATGTAGAGTCGCTCGGAAGAGATGTGTGAAAAATATATAAAG
AAATCTAATCTTACAAGATTACTTCATAAAAACAAAAATGTATTAGTGCACTTGAGCATG
CAGCGCGGACTGGTGCGAGTGCCCACTTCCATGTAAACGTTCTATAATATACATTGTTGG
ATGTAGTTTAAATCTGCAAATATTGTTGGATGTTGTTTTACTACTGTTCTTGTTTCTCAT
AAAAAAAGTTAAACAGCTGGAATTGCTATCTTCTGCTACCTCTATGTGTCTAACTCTCGG
TCACACGCACTGTGTGACACAACTGCCAGTAGATCGCACTGGCTCTCCTTGTAATAAAGA
GGTCCATGCTTTTCTTCTCCATTGTAAAGAATAACCCGTAAAAATGCAATGCCACAGGCA
CTCTCTGTTAACCTGTCTTTATTTAGGCAAACACATTACCATATAAGTAGGAACCTTGCA
TGGCGTCCTGTCTAACTTGAGCAACATCGCAAGCGCGCAAACCAAACCCCCAATGGCATC
CTTCTACGCAGCCATAGGTTTCATCCTCCCCTTCCTCCTCACCGTTGAGGTGGCGTTGCC
CCAATCTACAGGTTCCCCTGCCGCGGCGCCACCGACCACCGGGTCGTTATCCATCGAGGA
CGCCTGCAAGCAGTCCGCCGAGTTCTACGACCTCTGCATGGCGAGGCTCTCCCCGGACCG
GTCCTCCTTGACGGCTGACCCGGTGGGCCTGACCAGGGCGGCCATCCTGGCTGTCCAGAA
GAACGCGTCCGAGACAGCCACGTTCCTCTCGAGCATCGACGAAGATGACAACTTCAACAA
GACGGCACAGCTGCAACAATGCCTCGAGGACTGCGGGGAGCGGTAAGCAGCTAGCTCTGA
TGTGTTCACCAAATGTGACTTTACCGATCATTCATGGATGGCATGCGTTATTGATCATAT
ATATGCATGCAGGTACGAGGCAGCCGTGGAGCAGCTGACGGATGCGACGATGGCACTGGA
CACGGGGGCTTACGACGAGTCGCAGGCGCTGGTGTCGGCAGGCCAGGCGGAGGTGAAGCT
GTGCCAGAGAGGGTGTCAGGACGTAGCAGAACACCGGAGCATCCTCATGGCGCGCAACAC
TGAGGTCGACCACCTCTGCAATATCACTCTAGCTATAGCCAAGCTTATTCCCCGGTGACC
GGACTCTGCTCGCTCACGGTGGTATATGACTGCCATATACATGTCTAAGAAGCCATGGTG
GCTAGTGCATTAATTTATCTAGCAGGTGTGAGCTGGATCATGCCTCTTGACTGTCTGTGG
AAACTAGCTGAATAGCCATATTTTACTACGGATAGATAACCATGCTATGCAACAGATTAT
GCTATCATCGTCATACTCACTCTGGTCCACACCAACAGATTAATTTACTACTCCCTCCGG
TCCATAATAAGTGTCGCAGTTTTGAACTAAGGTTGAACTAAGCTTAGTTCAAAACTGCGA
CAGTTATTTTGGATCGGAGGGAGTAGTTCATTTTATTTTCTTCAGTACACAAATTAACAA
TATGTGTTTTCCCAAAATTGACAGGTTTCATCCGTTCCAACATCATGCACCAACAATAAA
ATTTCATACTCCCTCCGTCCCCAAA