morexGenes - Barley RNA-seq Database

Contig contig_2555611

Source Contig contig_2555611

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2555611 (2607 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_2555611

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_39954	2	1345 bp	MLOC_39954.2	Available	Available	None

CDS Structure of MLOC_39954

Contig Sequence (2607 bp)

>contig_2555611 2607 assembly3_WGSMorex_rbca.fasta
TTGCCTCTAGTGCATATTTCCAATATGGAGTGCCGGTGCAATGCAGATGATGCGATGATG
AGTGTGGCCATGCATCGAAATTGGAGGAAGCACCTCGCGGGCTACTTTCACCCGTGCGTG
TTATTTTTGCTGCGCTTCGAATGAACCGAGGTCGCTCCTTCATTGTTTGGTTGGGATTCA
GCTGCCAGGCAACAAAATCCGGGTAAGAAAGCTGAACCAAACAGGGCCTTAATATTAAGA
GGTAGACCGGAATCAAGGGATCCCACTTAAATGGAAACTAATGACTACCACAACAATGAC
GCATGTTGTGAGGGGAGGTCCAATCAATGAACCAAATTGCTCCAATCCAATGGTTGTGAA
TGGGTCTGATAGGACACTAATCTAATTGCTAGTGCTTCCCTTATATAATAGGGATTTCCT
AATAGTATTAGAAGGAGAGGACATATTGAATTGTGGGGTTAAAAGGTCCCACATCGATCC
AATATAACGAATCCCACCGAATGAAATATGTTTCACAAGTTATCATGAGCATTAGGAAGC
TACCACGGGAATGTATAGAGAATGAGGAGAGGGAGGTACCAATTTCGCAAAAATGAAATA
AGAGGGCCTTGCAGGGAGCACCATCATTTGAATTAAAATATGAGAAGGATTGTGGGCTTA
CCATACCACGTTGAACATGACGCATAGTTAAATTAAAAGCATGTCCTATAATACTGTATA
AAGAAAAAAATCAGAAAATACACGTCAATGAGTCGAAGTAACCACATAGATAATTAAAAT
TTTATTTATGCATTTTTCTGTTATTTTATAAAAGATTTGTCCACCTCAACATCAACTTCT
CACACGGACGAGATGGGTTTTTTCTAGATGTTTACAACGTGAGCCACAAAAAGATAAAAA
AATAATAATCAAAATTTGCATATTTCTCTTTTCACGTCTCCTTTCTGTGTGATGTCTTTT
AATAAAAAAATACATATTTTTTTCTCCATTTACATCGCACGGATATACTCCTATTTGCTA
GTATAAAAAATGAAGCACGACATCCGGTCTCTCCTGGTCCGTTAGATATATATAGTTAAC
GGACAGGATTTCTCCCAGGTCCATTAAATTCGTTCGCCTCGAACTTCAACCCAGCAGACC
GAACCTTGAAAGCTCAGTCCCACCTAACCCAGCCCAAACAAGCCCAATACCAAACCCTCG
CAGCCTCCCAGTCCCACCCACACAACCGAGAGAGATGAGCAGCGGCGGCGCGGACAAGTC
CGGCAGCGGCGGCGGAGGTGCTGGTGGGCCGGTCAAGACGCCGTCAGACTTCCTCAAGTC
GATCAGGGGCCGCCCCGTCGTCGTTAAACTCAACTCGGGCGTCGACTACCGAGGTCCGTC
TCCACCCCTCTCTCGTTTCTACAGCACCAACCCTAGGAAGCGCAGTATATTCTTTTTTCT
TGTGCGCGGTTTGGTAAATTTGGCAGGGTCCCCGTCCTATGAGACTTCTATTGAGATAAA
TCAGGGCTACTGGGAGCCTGCTTGCTGATAACTTTTTATCCCGGGGGTTAGGTCGGAGAG
CACCGACGTTGATTTATCACTTGGATAATTACTAGATGCTTTAGGTTATTTTAGCTGTAA
AATTCGTTCTTCTGCAAAGGAGGATGATTCAGTGTTAGGTTCGTTGCCCTTTGCTTGAAG
TTCATGTAGCAGCAGCTTATCTTGCAGAACTAGATATTACCAAATGAACTCTACTATTTG
GGTTTCACAAATTACTCTCGTCTCTCGGGGTTGTAGAAAAGTCGGAAAGTAGCAAACTGA
TTCAACAAACTTGTGCATTTTGATATGTGCATTCATATGTCATGATATTCTAATTTTATG
CACCACACATTTCAAGTGAAGAAATCTAAAGGATTCCGATATTGTTACACAAAATGCACA
TTGTAATCAATAGATTCCTTCTATTGGGACCATAGAGATGTGATGTCACGCCCCCTGAAA
CAGGGGTTCAACATAATAGCTGTCACACATTTATAAGCCCAACATCATAAACATGCCAAG
CTAAAATTTGTACATGTTTCGTTAACTATCATCGTTTTTCCCACACACTAATCTCTAAAA
CTAAACATTATAATTTCCCTCCCATGGTGCTAACTGCTAAACCTACTACCCACCATCATT
AGTTTATGACCATCACTGTTGTTTGCTGCCAAAATCAGATAAGCAAGAATGAGTATGGAG
GCACACTTAGCAAGCACGCACAGGAATACCATATTGTGCCGATTTACCAAGAATAACAGA
ATGGCAGGGGTAACTGATTTTTTGTTTTAATATTTGATAGGGAACTAATTGGTATCAGAA
ATGAACATGAGCTTCCCAACCCGGGGTTCACAGTCATGGGTGAAAGTTCACACTACTCAC
ATTCTGGCATTAACAGTCTACTAGAAACTCCGACGTCCTAGAAGAGCAGAACTATGACCC
CCTGAGGCACAACTTTTTTTCGAGAAAACGCAAAAGACTTTGCGTTTCATTGTATTGAAA
AGAGGGGAAGACAACCTCCTAGGAGGCTAGTACAAAGGTGTTACAACCAGATCAATGCAC
GTCCCAGGTGGGTGGCAGGGTGACCCT