Map Locations of contig_2555584 (4140 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2555584

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39949 1 646 bp AK250939.1 Available Available None





CDS Structure of MLOC_39949






Contig Sequence (4140 bp)

>contig_2555584 4140 assembly3_WGSMorex_rbca.fasta
CCCTCTCCCCCCCCAAAAAAAAAAAACTAGCCTGTTTAGCGGGCGACACCCTCGCCCTTA
TATGTCGTATTATGTATTTTCCCATAATCGATGTGGGGCTAAACCAAACAATCTCCTGCT
CACACTTCGATCGTCCACAGGTCCGCTAACACTAGTGTTTCCAACACACCTACCATGACC
GACCATCCGTGAGTCCACCGAGATTTATTCCGGACACCTGAACTCTGATACCAATTAATA
CGTAATCCCGAGTGCGCTATCAGCGCGTCGAGCATCTGCTGTCCTGGTAGAGTCTCTAGG
GCTGCAGACCCACACCACTCAAACCCTACTGCAGACAAGCATCACTCATCATAGACTGAT
GTTGAGTATCACGTCTGCATCAGACCACTGGTACCCAGTCCGATCCACGTGTCTCTCTCT
ATCCGCTGAAATAGGCTACGACTCTCCATGCATTTACGTAATAGCCCCTCCATCAGCACA
GAGTGAAATATTTCGCTAGACTCCAGCTTCACCTTGAACATGACACCATGTAGTTGGACT
TGCTATCCCGCGCCTTGTCGACTTTAAGCTCTCATGTGTGCACTGTCTTGAATCAACCCT
GCGTCATAGTCTTCTCGAAGCCGCACAAGCTCTCAGACTTGCACCACGTGTTTCCACGTC
CATAGAAGTTGGTCACCATCAGCATCACGCTCCTATGTCGTTGTTGCTGAAATTACCGCC
ATCTTCTGCTTTGACCCACATCCCGTCGATCCATCAGTCTGTCCAGTCCGGCCCAAAAAT
TATCCGACTGCAACCATGCTTCGCCTTGCGTCATGTTCGGCCCACACATCTTCGTGCATT
GCTTTAACGCCCTGTGTATGCATGATCATGCCACGACACGTTCCAGACTTCTTCGAGCCT
TATACGCACGTATGCATCCTCGCCGCACATGTCCATCTTCATCAACTTGGCGTTCCACTA
TAAAAAAAATCAATCAACCCTTCACACCAACAGATTACATCCTTGATGCGATACTTAAGA
AAACATGTAGCCATCTGACCCAAAAAAAAATAAACATGGATTCACCCACCAACTCCTACT
GATCTTATATGAACATGCGGCGTCGCGTCTTGACACCTTCATGCTGCCATCACGTACAAC
CCATGTACAAAGCAAAGAAAGTCAAAACAACATCTTTTGTTGCCTCTTCGGTGTACAGAA
TTTCATGTCACCACATCCAGCTACTGTAGACTTGATTTACTCTCTTTCCTGCTCCTCGTT
GATGGCTCGATGCACACATCATGATGTTCTCTGGCGCCTTTTTCCTTTAACAAATCTTGC
ATGCAATAGCTCGCTCGTAGCCGTCTTCCCACACGGTGCCTTGCTTCATGCGGCTCCCAA
CAGCCCAACCTAGGCCACAGCCAGTGCTAGCCTGGGCCTCGCAGCCATAGGCCATCGTGC
TCGCCCGCCATCCTTCAGGGAAAATCCTATTTAACGCATACTGCGTCAAAATGTCGGTCT
TTCGCATAGGCCCTCTCTTGAAGCGGGCGAATTGGGCCAGCCCACTCAGGCAGCCGGTTT
TGGAAACATTCTAGACTTTTTCAGACTTTTTTTAGGAACTTTCTAAAAGATTCCCTGAAC
CAGTTTTTTACTTTTTATTGTTTTCTTTTTTATTTATTTTTTATGTTCCTGTTTTAAAAA
TGTTCTGGATTTTCAGAAAATATTCCGGAATTTGAAAAAAATCTGGAAATTGAAAAAATA
TTCTAGAATTTGAAAAAATGTTCCGGAATTTTAAAAAATGTTTTGGAATTTGACAAAATG
TTCCGGAAATTGAAAAATATTCCGGAATTTAAAAAAATGTTCCGGAATTTGGAAAAATGT
TATGAAAAATGTACATTCTCACAGGGTGGCCGAAGGAAATCCTCCTTTTCTAATTTCTTT
TACTGAATAGTTGAAAATAACTTTTCAAAAACTTTTCTAGTGGTTATCGAAGCACATCCT
TTTTTTTTTTACATGTCAGTTGCTTAGATCCAAGTGACAATTTGTAAAAGATCGTAAGAA
TTCAGTTGCTCTAAAAACTGCTAGTACAAAACTTGAACAATTCAATTTATAACAACAAAT
TTAATTTGTTTGGTACTTCACTTTTTTGCAAAGGCGTAAAGTTTCTGTATCTTTTTATTG
ATAGAGAAGGAAAATTACACAATGGGATTACAAGTGCTCATGGGGGCATGTACACAAAGA
GGTGTGGTACATAAAACTAGGGGTTGCTCATCCCCAATTGAAACTAACACTCCGGGATGA
TGTCTTTGCGTGCCTCGTCTTTGATGGCGGTCGAGAGACGGGGAATCAAAGGTCGATCGT
TTTCAAAGATGAAGGCATTCCGGTGCTTCTAAAGCCACCAAGCAGTCCTTTCTCATCCTC
ACCTTTTTCGTTCTTTCCGGTCCCAACTCCCAACATGAAGAGAAGAACTTCCACACAAGG
GAAGCCCTCCATTGCCGACGGCTCTCTCAAGTGTCGCTCCTTAAATCGGTGCAGCCATCC
CTCATTTCTCTTGTCCCCAGTCAAGATGTGCTAATCTTTTCTAATATCATCACAATGTCA
CACAACAAAAATGTGGGGTACTCAATTGGCCATGTTCTTTTCACCATTTGGATGGGCAAC
TGTAGGAGTACCAGAACGGCAGAGGAGCATGTCCATGTTAAACCAGCAAGTGAAGGCGAT
GAATTAAGCTCCAAGACCTTCCAGAGTATGCAGTTTTTTATGGTCATTTTTCTTTCTAAT
CAACTTCAAGGGTAAATAGATTTCTGAATAACAAGGATGTCAGTCTTGGTTTTAATTTAA
AAAGAGAGGCTTTGAACAATAGTGGTGTAAATTCACTCCCTCAGCTTGGGTAATAACTCC
TCTTGTGTTCTTGTATATGTAAGACCGAATCGACGATCAGACTGCTAGGATTTTGATCTG
GCCACCTGCTCGAGATCGATTGACATGGCCGTGAGGCCTTTGTCTCTCGACTGCTCCCGG
CTTCTAAACCTGTGCACAGCTGGAAAACAGCCAAAGCAAGTAGCCTTCTGGCCTTGGAAG
CTAGGGGTTGGTTCTCAGAAATTTCAAATGAAGCTTTGGAGGAAACTTGCCACAGAAATC
TCCACTTCTGCTGTGTTTGGACTAGTAAAACATAGAAAAGTTGCAGGTATCATCGGATTT
TAAACACCCACTCAAAGTCTCAGACCCTTGTAAAATCTAGAAATTCTACTCTGCTCTGCT
CTTAATATTCTCTCCTCTGTCTTGTTGTTCCACCATTTCAGAGCTGCAGTCACCTTCAAT
TCTTATAAATACTTTCGATCCTATATCTTCGACTTGGATACATCCAGTTCGAACATTGCC
GACATTCCTAAGGAAAAGGGAAGGCGTTGGGCTTCGAAGCTACTTCTTCTTGGAAGGGAG
GTAGTAGATAATCAAGATAAGGGAAGGAGCTCGATTTGGATGCGTGATAAGTCACAATAT
GAAATCAACTACTGTATTAATAACATAACAATATATATTTTGAATACATACAAACTTTAG
GTACTTTTGACACACACCTAATTAAGAGATGGAAGGGAAGGGGATACCAAATTTTACACA
CACGAAGACCGTACGGTATCCATCACACCACAATAAGCACGAAAACTGTAGACGAATCAT
AACATAATTTAGCAACACAAATGGTTGCTCCGAACTGCTAAGTCTGATGCTGCTTGAGAC
TCCCATGTGACAAGAAATATAAGGCACACTAACAGAGAGATGAAATGCATCATAAAATAT
AATTGAGCATCTAGACCAAGTCATGCAACGATATTAGGCAAGCATCAGCATCATCATAAC
ACAGTAAAAATACTGAAGGAAAATTCCAAGCAGATCTCATGATTCAACACATGAACCACC
ATCATATCTCATAAGATCCAATCTAAAAACATAGTCTTTACGGGCAATACCAAAGCCAAA
ACAGGAAATCTTGAGCGCAGCAACAGTTTCCGATAACGAGCGACTAAAAATGTAAAGGAT
TCGGGGTAGTAATGGCGCGGACGGACGGACGAATAACCTAGAAGCGGAGCTTGGTGAAGA
ACCACCTGTTCTTGCCGGTCTTGAACCTCTCCTCGAGCTTGGCCTTGGCGGACTTGGCGG