Map Locations of contig_2555550 (2955 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2555550

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39939 1 1087 bp AK356874 Not available Available None





CDS Structure of MLOC_39939






Contig Sequence (2955 bp)

>contig_2555550 2955 assembly3_WGSMorex_rbca.fasta
GGGAGCATATGTGCTTTCACAAACCTGGGACGATTTTGAGCTAGGAATGAGTCTAGACAG
ACAAAGATCAAACACAATTTTAAAGTGTGTCGATGGGTTTGGCCATCGTTTCAGTTTGTT
TCGACCTAAACACATGGATATATGGATCAAATGGGTCGTCGCGTTGGAGGTGGTCTTAGA
GCATCTATAGACGGATCTTGCAAATCGGATCCCTAACACCCGCACAGACGTGCCGGGGCG
TGTTCACGGACACTCACCAGGTACTCCCTAAATCCGCGCCTTCACACTTGCATATCTCAT
ATCCAGCACCTTATATCCATTCAAATCCCTGCAACATAGTACGTCGATCACCAGACGATC
AAAAATGACAGGAAATGGGCATATAAACTGATATCAAATGGGCATAATTCACATAAGCAT
CACCAAAAAGACATAATTCATACAGTTTAACGATCCGGCATATTCTAACTACATACTAAT
ACTGGATTATGTAAGAGGAGAGGGCGAGCTTCACCACTTCCTCACCGGGCCTTTGCCCTT
CTGGTCGCCAGCGATGTTGTAGGCGTCCGCAGCAGGAGGTGGGTTGACGTTGGAGCCGTT
GGAGTCAGCCCCATCAGAGGAGGAGGAATCGAAGATGATGATGCAGCCTTGCAAGCGCGT
GACGTTGCGGTCTTGCTTGCGCTTGAGCTTGGCCACCCTTGCCACCTCCACCACCTCCTG
CTCGGATTGCTGAATGCCGAGCCGGAGTTGTTTGACGTTGATCCTTCAGAGCCGTCGGAC
GCCCGTTTCTTCCGTGGTTAGGGACCAACGGTACACCCACTAGAGGAGACACTCCTCCTC
GTCGGGCACCGGCATCACGACGGCGTCGGGTGGACTGCGCAGCCTCGTCGGACCCGCCCC
TCCCCTGTACATTGCCCTCTACCACTCGCGGCGGGCGGCGCGTGTCACCGACTCCGGAGT
CCGCATCCGTGGAGCTGCGGAACGGACACTAGAAGCAGCGATCGGAGTTGGAGGAGGCCG
TCGGGCTGGCGGTTCAGATTGTGCAGGCCTCGTAGATCCGCACGCGGGGCGAGGAAGGCA
GCGTCGGCGTTGTGCCGACGAGCTACAATAGGCATCGCTTCGGACCCGGAGCTGGCATCC
GTATCGACCTGCAAGCGCTTGAATGCGATACGGAGCGCTAGCTCCTCCGCTGGGGAGCTG
CCGTCCGAGTGGCTGCCTGTGCTGGACATGCTCGACGGATTGGATGGATTGGAAAAGGGG
GGAAGTCGGGGAGCGGCGCAGCGCGGAGCGGAGTGAATTGAGCTAGGTTTTGCTTCGGAA
GGGAATTTTGTAGGGTCAAGGTGGGCGAGCGATGGGTCGGGTTGACGTGGCAGACGCGTC
CGAACAGCCTCATATTCGCTCTATATTTAAGTTGGACATGAGGATGTCGGTCGCTCCAAA
CGTTGTCCACGGTTTGAAAGCTTTAGCCGAATCAAATTTTTTTATGATCGATGAATGGTC
GGGTGGTTTCTGTAAATGTTTGAGACGGATACAAAAAAAGTGTGGTTATAGATATGCTCC
TACGAGGAGGTGAAGCTTGCATTGACGGTTGACGCCTACCACCGACCGACCGACGGAGGA
AAAATGCGGCCGGGAGAGATCTCAAGAGCGGAAGGACGGAACAAGTACCGGGATGGACCG
AGTGGCCCACGGGATGGTGGAACAGACAAACCCGGAAATGGGCAGGGAGAAAAATGCTGC
TGCTGATGACGACGACGGAGGAAGCATCTCAAAAGCTTTCTGTTCGTCACGATGCACCCC
CCTGCATGCATCCCCATCCCAACCATGATCCAATAATTTGGATGAACCCCTCTTGGTCTT
ATCCTCCACCAACCTAGCTTGGCCTACCCTAGCCGAGCCCCAACCTCAAGATGTTCAACC
CAAACTTGCAATTTATATCTTTTTTCTTTTCTTTTGACAATCACTTGCAATCTACTACTC
CAACGCATAACCAAAACCAATCTCAAGAGGTCCATTTCGTGGGCGCCGAAGCAGTTTCCA
CTTCCCACGAGGGCGCGCCGCAGAGAAGAACAAACGTACGTACTCACTCTGCATCCGGGT
CCACTGTCCCAGTGCTAGAAGAAGCACCCGCCGGCCGCTTCGTTCTCGCTCTCTAGCGGC
ACCCAGGCCTAGCCACACCACACCACAGCCAGGGACGTGTAGTTACGCGAGGAATCAATC
GAGGTAATTATGCCCCGCGCGGCCTAATCAAAGCCCAAATTTAAGAGCCATTGCTGCACG
CAACGCAGCACGCCATACCTTACCTTGCCTTGCCATACCATACCCTGCGCCCCCTGTCTT
CTTCTTCTTCTTCTTCTTCCTCCTCCTCTCCTGTGGCCACAGCGGCGGTGCTACAGTTCT
AAGCGGCGTGCGTGCGGGCGGGCGGGCGGGCTTCTCGTGGGCTGGTGCCGGTCTGATCTG
CGCGCGGGAGGTGTCAGCACGGAGGGGATCCCCATCGCTTGCCGCTTCGTGGCTCGGGCC
GTCAGGTAACGGAGGATTTCAGTCCTTTTCCCACGGTCTCTCTAGTTGTTCTTGGGCGGT
TTTCAGTTGCGAGGGGGACGCCAGTTCTCTTGCTGCCCAATTTTCTGCAATGCCGCGGGG
TTTCCCTGGATGCATTCCTTGCTCAAGTCCGTCTTGCTATCTTCGCACAAGGATTATCTT
CTGCTCTTCCTCTGCCTTTCTTTTCTTGGTTGGGCGGCGAGTCAAGTAAATTTCCTGCAA
ATATGTCCGATGTGTTCTCGCAAGGTCTCGCGCGGTCGTTTCGTTTCTTTCCGTGAGGGG
TGTGTGGGGAGGAGCCGAATTACGCATTTGCAGCTTTTTCCAGGGGGGGGGGGGGGGGGG
GGCCGGGGGAGGTGTATCTCAGTTTTACGCTCTTTCCATGTGCCTCGTATACCTTCGTAT
ACTGCCTGCTATACG