Map Locations of contig_2555348 (3496 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2555348

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39897 1 707 bp AK249302.1 Available Available None





CDS Structure of MLOC_39897






Contig Sequence (3496 bp)

>contig_2555348 3496 assembly3_WGSMorex_rbca.fasta
AGGAACGGAGGGAGTATAACATTAATCACAATAGCCACATATATAACATGGAAATCATAC
TCCCAAAAGAAAGAGTATACTACCTCTTTATACGAGAAGGGATGTTGCCAAATTGAGGTG
TGCTGCTGCTTTGACCTATCCTAGATCGTATTTCTTTGGCTTCTTCTCTGAAATAAAACA
GCTAATCATCTCAGTATTTGCAAAATCTTAGGTAGCTAGCCAGCGACTTAAAAATGAATC
TTGAAAAATCAAATCCAAAATTGAAAAATGGTACGAAGCAAGAATGCCACATCTATACCT
GTCTTCCGCGAAGTAAATGTGCTTGTTTGAACGCTTTTCATCCACCGCGTGAAGGGTTGA
GCTCAATCGTTCAACTTTCTACAGTCAAAGGGGTGCATTCAAATTGGAACGGAATATAGG
AATTAGCCACAACAAACATAGTACTCGTGTGTTTTGAATATTTCGAAGCCACCACAAACC
TTTCTTTCACTTTGGACAGCCTGAAAGATGTATCCCATGTCCTTATGCTTCAACAGCATG
CGTTCCTCTTCGGTGTACTTATTGTTTACTTCAGGCCTAATAAAAGGTACATGATCATCC
AAATTAACACGTAGAGTATACCAAGGTTCGAACTTGCCAGAGTAACTAATCTATAACGTA
CTTGGGCCTATGGATTCCATCCACGGTTTTACTGTTGATCATCTTGAAATAGAACTCATC
TGGGTTCTTGAATGATGCCTTCTCCTTCAGGTTCTGTATTTACCAGATAAGAACAAGGAC
CATGGGTTAAGATGGCTATGATAAACATCCCAGGAATGTACCAAATAAACGAAAGAAAAT
GTCCCTCTGAACTCTCATACTGTAGGTCCTAAGGGTGTGTTTGGGTTGAGCTCAATTCGA
TTTTCGGCCAATGTTGGCAAAACAAAGGAACTAGAGCCAGTTGAAGGGGCACATCACATG
ACATAGGTGAAGAGAATAAATGATACTACACAAAGAGTCCCAACTTGGGAAGGAGCAGAG
GCAATACCCTGATGAAGTCCTCCTTGCGGTGGTAGGCCGTGGCGCGGACGATATGGTCCT
TGTGCTTCTCCAGAAGCCCGTACTTCTTCCGCGACTCCCTGCAATACCAATCCGAAATCC
AAGATCGGTCAGGAAATCGGCGCAGGCGCGAGAGGAAGGTCCGACAGGGTGCCGCCCCCA
GAAGAGCCCCAGGACTCCGGCGTCGTGGGAGGCGGGGGGCGTCGCGCAAGGGGAGGAGGA
GGGACTTACGGCTGGGCGCGCTCCTTGTGAGCCCGCCGCGGGATCGAGTTCCGCAGGGAC
GACATCTTCGTCCTCGCTGCCCCTCTCCCGGAAGAAGGAGCGAGCCGGCGGAGGAGCGGA
TTTGGGAGGGGCTACGCGGCGAGGAGAGGAGAGGGGAGGGGAGATGGGAGGCCGGAAGAG
AAGGGGGTTGGCCAAGCTAGGGTTCAGGGTTTGGGTTTTTCTCGGGCGGTCGAAGCCAGG
TCTGCGGGTCCGGCGCAAGCCGGCCCGTTCGTATTGGGCTGTAGTGTTACGTTTTTTTCT
TTTTTGCGGGGAGGCTGAACAATTGTTGTTGGTGTGAACAATCGCATCTCCCAAGCATGG
CCTTAGCAATTTTTCAAACAACCTTTAATTCGATAGTTGGAGTGACAGTGATATCACCAA
TCCATTGGATTCATATACTCATACTTGTATTATTTCTGAATTTATTTCAGAATTTTCGAC
GATATTCTTTTAGTGGGAGGAGACGTTTCCGTCGACGACGAGACGTCTACGACGACTTCG
TAAATCTGAAGATGATATGCCGACTCAGTCTCTCTAAAGTGCTCATAGGGGTAAGGTATG
CGTGTGCGTGTTCATAAGGGTGAGTGTATGTGCGTGTATATGAATGTTTCCATCAGTACT
GTGTTAAAAAGGTAATTTTTAAAAACAAAATCCGCAATATTTCATATTTTTTCTTTTTAG
AAAGTATTTTTTAACTCGCCAAGAATAACTAGCGCGTCTGTGAACGAGATAAAACAAAAC
TGGCTTGTCATCAATCAAGTATCAAGCTGTAGAGACTGCCACATTGCCTCTTAGTCCCTG
TTTGAATTATCGGTTTGCTCTTAAATACATGTGTAATAATACAGACCTCTAGACATTGTT
TTCATTTCGGACGGAAATAATGCAGCGGTCGGTAATATATTTTTTGAATAAAAGGGGTTT
CTCCTTGCTCCATCTTTTATTGATGAAGCAAAAAGACAAGAAACATAAGAGTGCAGATCT
AAGCCTCATTACAACCGAGATCGTACCAGCAATAGAGCCAAGGCCAAATAAAAGTATTTC
CATCCACAGCTCAAAGAGCAACACAAACTAGAAACTTAAGACAAACGGAGGAGGGTAGCT
AGCAACATCAAACTACCGTAGACTATGGAATTATCTTCATGTGATGCGGAGCAGTTCCCC
GCGACACTTGTCCAACTCGCTGATGAATTGCCAAAGCGTTGTCTCCTGTATGGCGTCGCA
GAGCACTCCCCATTGTTGTAGAAAGTTTTGAAGTTTCACAAGAACGCAGTCTAGACTTTT
CCAAGTACAACCGTGAAAACAGAATTTATTTCTTAGTTTCCACACACTCCACAAGGAGGC
AGCTACAATCATGTTCAAGACAGGTTTTTCTTTATGTTTGTGCCACAAAACACATACATC
CTTAAAACAGGAAATAATGGGCATTTGGAAGAAGCCATATATCATCTTACAAATGCATTT
AGCCACAATACAATCAAAGAACACGTGTTGTACTGATTCCAATTCCTTACAAAATAAACA
GGTGGGATCATCGATGTTTCTACGCTTAGCTAAATTGTTTCTAGTTCAGATCTTGTTATA
AACACTTAGCCAAAGAAAAACATGAATATTATGAGGACACAATATTTTCCACATCTTATC
ACTAATGGTAGAAACAACGTCATCAAAGTTAATGGCGTTGTGGAAAGATTTAACATAATA
AATCCCTTTGGATTCCAACATTCAAATAGGGACATCTGGACCATTACCTAGGGGAATGTC
TTGGATAATACCAAGCAACTGGTTCCACCTATAAGTCCATACCTGTCAACACATCTTCTA
AAAGAGAGCTTAAGTTGCACTCCATCCCACACCTGAGAGACAATGCAATCACGCTGGTTG
CAAATATAGAATAGATCTGAGAACTAAACTTCCAAGGACATATCTCGAGTCCACACATCA
TGCCAAAACTTAATACTTCTACCATGTGTGGTTTGGGTAATTGATGACAATCCTAATGTA
CTAATGTTTGCATTGAGTTATACATTTGAAGGAATATCTATTTGCAATGCATGAAGAATA
TTGGATGAATTGAAGTATGTTTGTTCCATGAAGATGCAAGAAGGAGCTCGAATGAATTCT
AAATGGATGTCATATACATATTGTTGTGCATGCATCAAGGATGAGCTCATTGATTGAATC
AAATATGATACGATCA