Contig Data
morexGenes
Links



Map Locations of contig_2555216 (4890 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2555216

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39873 1 1314 bp MLOC_39873.1 Available Available None





CDS Structure of MLOC_39873






Contig Sequence (4890 bp)

>contig_2555216 4890 assembly3_WGSMorex_rbca.fasta
TCCCATGCGGCGTTCCCCAACACCCTCATATTTTGAAGCGTTGGCAATTTCTATAACTTT
TTGCCATGGGCGAGCCACACGATACCACCTTTAACCCATGCTAAGTTGATTACGGTTAGA
AAATAAACATATGTTTTTCCATGGCTATATTGCATCCATTAGGCTGGCATTTGTTCCTTG
ATTTTCTTACTGTTTGCAGAGCACCTATATAATTTGATGGCATTTTGTTCCTTCCTTCTG
TTTTACTATTCAATCTATAGCTTGTTTGTAATTCATGGAAAAATGCTTGCAAAAAGTTCT
CTAGTTCATAGCAATTTCAAAATAAAAAATCCATTGATCAAATGGTAAATTCACAAATTG
TTCATGTAACAAATTTTTAGTTTTGCCATGGCAAAGAAACATAATCGATGTTTTTTGCCA
TCAAACATGATATGTCCTATGTATAGGCACCATGCATAACAATTGCCATGTCTAAAGAAA
AATATTTTTCAGAAGTAGCGTATTGTTCCATAGTAATATAGTGGTTGCTAAGTGGTAATT
TGAGTGAGCATAACACAACTAATTCAAAAACTAAACGATTTGTTTGTGAGTATTCAACTC
AAAAGGCATCATCCTATCTAGATTTCATTGTATTTTCTAGGGTGTATTCGTTTTTTGAAT
TACACCATGGCAAAAAAAAGTATTCATCATGGAATTTTTATTATAGATTACATGGAAAAT
TCACGATACCAAGTCATTTTCATTTTTGTAAATACCATGACAATTATGGACCATGTGGCA
AATTTATTTTTTGTAGCTTGACAAACCCCTAAATTTTCCATGTTTCTTAGAAAACTACAT
TCCTAACTTTTTTCCCATCCGTCCATGGCAAGTTTCTAGATTTGGCACCTTTTTCTACAA
AGATGGCAACTCCTTAAATTTGTCATGATGTGTACCTTATGGGAGCATGATAGGACCCAA
TTGCATACACATCACCGTAATTTTCTACACAAGTCCCATGATATTTTGTACTCAGCATCA
TGAAAACTTAGTGTCATGGTAATTCTTGTACACAATTTTTTATGTAGTATCATGGCAAGT
ATCGTATATAATGGCACAATGTGCTAAGAACAATGTGACATGGGAGTATTTATGCTCTTG
AAAAAGATACCCACAATCTTAATGTGCAATTTATATGCCCGTCGTTCACCGTTTAACATT
GATAGCAACTTTTATTACGGTGCATAGGTTTCGAAAGTTATTTTTGCCATGACAACTTTG
ATTACAGTGCATATGTTTCAAAACTTATGTGTCCACCATTAAATTGTTTTGCCATGGCAA
AGTAGGATGGTAATTTAATATGTTATCCACTCCACATACATTTATGTTTACCATGACAAA
TTTTAAAGATGATTTCCCCTTGGCAGATTAAGATCAAAATTATTTATGAAAGGTAGCTAC
TATTTTTTTATACCTTGGCAAGTTTTATTTTCGTTTTTATTTTTGACATGTTCCAATTGC
CATGATAGTGAACAAAAGAAAAACCCGTTTCAATAATTTTTGCCATGACCCATGAAGAAA
ATATTCCATGAGACACAAAATGAATTGTCATGTTCCATGTAGTAAAATATTCCATGATTG
AAAACAAAATAAAAAATAGAAAAAAGTATTCTTCAGTATTTTTTTCATTACCCATAAAAG
CACATCTGCGATGATACAAAAAAGGATATGCATGTTCCATTCAGTACAATTTTACCATGG
TATAGAACATAGCAAAAATAGAAAGGGTTTCTAAAATAATTTTTCCATGATATAAAAAAA
TCAATTGCCATGCTCCAAGTAGTACATTTTTTCATGATTAAAACAAAAAGGAAATGACAT
GGTACATGAAGTTAATTTGTCATGGTCCAAAAAATAAAATTGTGATTTTCCATGAAGTAA
TTTTTGCATTGTAAGAAAAAAGAAATTTCCCATTGTCTACGAGGTAAACTTGCCTGGTCC
TAGAAAAAAACTTACTATTGTCCAAAAGAAAGAAATTTTGCCATGGTCCAATTCTTTTTG
TATGGTCAGTTTTTCCATGATAGAATTTTTGGGAGTAATCTCATGAAAAAAAATTGGGAG
TGTGTAAATAGTAACACGACCGAGATCCACAACCGAGACCGAGGAAGGAGACTTGGACGG
TTGTAACCGTGGTTATATACTCGCTCTGGAGGCATCAGAGCGACATCGTCTTCAACGAGG
CTGCGCCATTGGCAGATGCAGTGCTCAGGCGGATCGACATCGAGGACCAGAATAGTGATG
GGTTGTTTTCATAGCCGTAACTGGGTTGTAAGAATATTTAGCCGTCTTGGCTTCTTCTAT
CTACTAGCAAAAGGGCCCGTGCGTTACAACGGAAGTAAAATAATTTCTTGCATGTATGTA
TCTTATGAACCCGTGTGTTGTTGCGAGCTCATGATAAGAGAAAAAAAGAACATTCAATAT
TACAATTCCATGTATTCTTTGCCTAAAAGTTGTTGTGCATTGCAATAGGGGCGTGTATAT
TTGGTGGTTCAACACAATTCATATCTAAATATACATTTGAAATTAGCTGACAGTATATTA
TTATAAAATCACGCAACATTTGATGCAGAAATAAATTTTTATAGATCCTTAAATCGTGAG
AAAATTATGTCAAATAGTGTATGAAGCTTTTTCAATACGAAAGACAAAGATCAAGAAAGG
AAAATGAGGACACAACAAGCTTGAAACTGCTTAAATAGCATTATACTCCCTCCGTACCTA
AATANNNNNCTTTTAAGATATTTCACTAGGTGTTTACATACGAAGCAAAATGAATGAATC
TATACTCTAAAATATGTCGATATACATTCGTATGTGGTTCATTAGTGAAACTCCTAGAAA
GATTTATATTTAGGAACGGAGGGAGTATATGTTAGAACTAAGTAACATGTTACACGTATA
ACGTACTACTTCTCCTCGCCGGTCAATCCACCTGCCTGCTTCGGCGGCTAACGCACCGGC
CAGCAGCTCATCCTTCTAAAACTTTTGTATGTACCCGAGTGCTGCAGTGAGCAAATAATG
ACGGGTAACAAAATGTGGTGTATGTATCTTCAAGAGCTGCTCGAGAAGAACCGAATTGAT
TTATGTGTTAATCAGCAACATCAACGCTACATCCATATATATGAATGCCCACACACGTCC
TCCTTTAATTAAGAACGGATCATCATGCAGGGTGCAAGTCCCCTTGCTTGCATGGAAAGG
ATCCTTGTTTAGAGGCACCATCATTGATGAATTAAGCAGCAAGAAGATGCTAGGCTGCGT
TGATTTTGTTAGAAATTAATTAATAGATTAATTTAAGGATATGTCCAACCACGAACAGTC
GTGTCTTTTCTCTTTCTCTATTGCCAACCGGCACCTGTTCTGGAGGGATGCCTCCGAACA
GACACCTCTTCTTCGCACCTCTTTCAGATGTATATATACTTGAGAATCAATAAAAACAGG
ACTAATCGTTCACTCACTTTCATTCAATCTCGTTTTTACTCTAACACGTTATAGCACTTA
GTCTCTCCCAAAAAAGAAGAAGGCTTTCGGAAGGATAGCCGAGGCATCGGACACCGACTG
GCAGGACGACGCTCACGCAATCGCTGCGGCAAGGCTAGACGGCGAGATGCGACGCACGCC
CCAACGTAATTCACGGCCTAGAGCGCTGCAATTGATAGACGGCCAAGGAACGCAAGAAGG
CCGAGCGCGGCCATGACGATGGAATCCCGCGGCTCCACACGGCAACGCTCTGCGGACTCG
ACGAGCGGCCGACAACACGGTCCCCAACTCGCGCGGGGGCATCCTCTCGCGTGGTCGCCA
TATCCAGCGACGCGTCGTCGCGATCGCCGATTGGAAACGCCATCACGCGCGGCGGGAACA
TCCGGCAACCTCGCCTCTGTGGTGTTGCCCACGGGCGCAGCCCTCGGCTACCGGTGCGCT
CGGCGTTTGCTACGGCCACAGCCGACGTGGCGCTCAGCCTGCATCCTTGCAGTACAGTGA
CGCATGCATCACCACTGCGCGGCTACGCCTGCATCCCTCGGCCAGGCTCCTCGCAGAGTG
GCGGCAGTGGCCGACGGCCGGTACCCGGCACGGCGACGCCCTCCGCTGCGTTAAGGGGAG
AAGCCCTCCAAGGCGGCTCCTCCCTCTGGCATCGGCGAGCGGAAGCGCAGTCCTCAGCCC
GGATGGAGGCAGCCCATGATGCACAAGATGCAGCGGCGCAACCATCGGTCTGCCTGCAGA
CCCGCATGCACGGCAGCAGCGGTTACCAATGGCCACAAGCAGACAATGGGGAATCTTATC
CTTTGGCTATTGTTTGATTCAGTCCTCAGACTTCATCCTAACTACTTATAAATCCCTGTA
ACTTGGAGAGAGGCCATTTGACTAATTGTGTTATGCATATTAGATCCTAGTATTGTTCTG
CATTTTAGACCATCAGGCTTAATACTACTTAAACACAAGCCCTCACACTCATTGTTATTA
TAGATTATGGCCAAGTCCCAAGGATTACGTAGTGTCATACTTGATATGACGACGTCCAAA
TTTATTTGTGAAACCACAAAGTATTGGCGACATCTACTGCATCATTTGCAGATTATCCAT
CACTACTGTGAGATCTATATCTTTTGTCATTTTGATAAGATGACTACCATCGACATGCTC
TTCTAAATATTAATATGTCTAGCCCAAAACATATTTGTGAATCACAAGGTCCTGATGGCA
TCTACTGCACAATTTGCAGATTATCCATCACTACTGTAAAGTCTACATCTTGTCATTTTA
ACAAGATGAATACCTTCGAAGTGCTCTTCCAAATATTAATATTAGATGTGACTACCTCAA
GAAATCATAAGTTAATATTGACATCTACTG