Contig Data
morexGenes
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Map Locations of contig_2554997 (3751 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2554997

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39834 1 2270 bp AK249361.1 Available Available None
MLOC_39835 1 3583 bp AK363664 Available Available None





CDS Structure of MLOC_39834






CDS Structure of MLOC_39835






Contig Sequence (3751 bp)

>contig_2554997 3751 assembly3_WGSMorex_rbca.fasta
CATTTTGGGCAGGTGATTTCTTTAAATTCTGGTGTTAAACTTGAGTATACTGTCTTCCTG
GAATTGCTAAAACGATCAATATTTACTTTATCAGATACACAGAAAGGCATATTTGATGCA
GTTCTGAAGGGGCACCTTGATTTGGAATCAGACCCCTGGCCTAAGATATCTGACAGTGCA
AAGGACCTTATAAGAAAGATGCTTTGCAATTGCCCTTCAGAGCGTTTGAAAGCCCATGAA
GTGCTACGTAAGTATATTTTATCTATTTCTTCACCCTTGCAAATTGTTTTAGTAGTCACG
AACATTTTCCTTTTGTACTTGTTTACCAATTATATGTTAATGCCAGGGCATCCCTGGATC
TGCGAAAATGGGCCGGCCACTGACGGAGTTTTGGATCCTAGTGTCATCTCTCGGCTCAAA
CGGTTCTCTGCAATGAACAATCTACAGAAATTGGCTCTGAGAGTGAGTTTTCTCTGCAAA
TATTTTCCATTTCACATCTTTTGATCTTTACGAGTGTAATAGTTGAAATTTTGGTAGAAT
ATTAACTTTATGTAGTATAATGGTCTCATGGATCATGGCTCTGTTTTGTTTGGATTTTCC
TATAATATGTTAGTTTATGGCACATGCATAGTTTCTGTGAATCACCGAATCATCAACTGA
CATTACAGTTCATATGAAGAGCATGCCATTGGTCATGAATGGACTCTATTGCTGCCATGC
GAGCAAGTTCATTTGATCTGCTGCTTTAGTCTCATCACCTGAATTTCTTGCTGCGGAAAG
GGGATATGCTTTTGTTTTTGGCATTCAACTGTGTGGGTTAGGCACCATGCTGGAATTTAA
TTTGTTTCACTATATCCTACATCTATCAATTTTGTAAACAGCACGACCCTGTTTCTTCTG
TGACACTTTATATGCTTCCAGGTGATAGCTGAGCGTCTTTCAGAAGAGGAGATTGCTGGA
TTAAGAGAATTATTCAAGACAGTGGACATAAAAAATAGTGGTGTGATCACTTTTGGTGAG
CTAAGAAAAGGTTTAACAAGATATGGCAACGGATTGGTGGATACCGAGATTTGTGATATA
ATGGAAGCGGTAAGTGTGTGCTTCTGATTATTACAAAGGCTCGTCCATATGTGTGGAATG
TGTAAATGTTTTCCTGCTTCAAACACTGTTTAGCAACCACACACTATTCTTCAATTCCTA
TGTGATTCTGGGATATCCCCTGTTGTAAAATACCTAGGCAATAGATATCATTGCTGTGAT
TACATATGACATTCTTTTTGCTGAAAAATGCCTAAGCTGTACACATATGGTATTGCAGTA
ATAATATATAGACATGCATTTCTTGATTTGTTGGTAGGATATTGTCTGCATTGCTGTCCT
ACTTCATCTAATCTTCCTGAACTTTTTTCAGGCTGATACAGACACCGATGTAACCATAAA
TTACGAAGAATTTATTGCTGCAACCATGCCTTTAAACAAGATAGAGCGGGAAGAGCACCT
GAAGGCAGCTTTTACATATTTTGACAAAGATGGCAGTGGCTATATCACAGTCGACAAGCT
TCAACTAGCCTGTGCAGAATATAACATGGAGGGCACTCTCCTTGAAGAGATTATTTCAGA
AGCCGATCAGAACAATGTAAGTCTATTATCCCACTCTAAACTATCACGGCCAAATAGTGG
TAGGTATATTTTGTCAATTTACACATGAATACTGTATAGTGTTTTGGGACCTGCATCTTT
GATACCTACTGCAGAGGGTCTTGATTCTAAGAGCCATTTAACTTGTGAAACTGTACCTTT
GTCATTGGTGGCATTGGGTATCTACCACCAGTTACGCCTAATACCCAGTGTCTCAGCAGC
TAAAAAAGAAAAATCTTTATAGGAACAGCACGAAACACATAGATCTCGGATTACACACAA
ATTTTGTTATCTGCATAATGTTGCAAAAATAAATAAATAGTGATATTAACTCGTTACTGT
GTAAAAATCAACTTTGTACTAGTGATCTTAGCTGGATAATACTGTGAGAAAAATCTAGTG
TTATTTTCTTCAGCATGACCTACAGCACCGCTGATTTGCTTGTCAAAAACCAGCTGAATC
TAATGAATGGGTATTATCTTTGTTTTTCAGGACGGCCAAATTGATTATGCCGAATTTGTA
GCCATGATGCAAGGCAACGCCAACGGTGGCAATATTGGACTTGGGCGTCCAACTATGGAG
ACCAGTCTGAATGTGACCTTGAGAGATGCAGCTCAAGTACATTAATGCACAGATTTTGTT
CTCTTCTCTATGCCATTATGTTCACAGCCCAAATTGGGCCGTGGGCATGTACTTCCGAAG
TGCGGGAAGAGAACAAGTCATTCTTTCTGTGGCATTTATCGAAAAAATAAGCTGGGCTAG
CTAGTAGTACAGTCATTGTGAGAGACAGCGTCGTGGGTTACATATATATAGTAAGTAGTT
GTGTCCTGGTTCATATGGCTGCAAGACTGGCTGTTATCCAGCAGGTGGAAGTAAGAGGGG
GCGTGCGTCCAGTTCGTTTGTTCTTTGTGTTATCAGTTGTGTACTTATGTCTAATGAAAA
ACCTATCTTAATGAGATGCCATATTCCCCAAATTTCATCTTCTTACTGTTATAATTTTTA
AAACTATATGAATCTATCTGCACAGATCATCATCCCTTGGTAAACCAGAAGAACAACACT
AGGCAGGCAAACCAGCTCATGATTTGCAGAGACAATTTTGTTTAGTAGAGGACAGATTTA
CAGTATCAGTATGGCTATTCTAGATGTGTAAGTAGAGTATATTTTTCTTCACATTCTATA
CATTCTATGTAAATATCTGATGAAACCTGAAGGAGTCCTGTCTGGCTCAGTTCAGGTGGC
CTCCGACACCCGGGTCTCCTGGGCGGCAGCTATCTCCTGCGCACGAGCGAGGCAGCACCG
TAAGTAAGAAATTTAATTTCCGGAGAATGGCAGCAAAGCCGCAATATTTACCTTGACGTC
TCCGTCCCTGGAGAGGACGCACGTCGACGTGACCGCGCTGCCGTGGCCCAGCAGCCACCC
GACCTCGCACACCACGTCGCCGTCGCCGCTCACCTTGAGCGAGCTCCACAGCTGCTTTGG
CAGCAGCGTCACGCCGCCGGCGCCGTCCCTCGCCGTCCTCCGCGGCTCGTGGTCCGGCTC
CAGCCCCGCCAACTTGCCCTGCATCACATCGGACATGTCACGCACTGACATCTTGGACGG
ACTGTGCGGGGTACGTGCAGGAGGAGGACGCTCACCGTGACGGGGTCCAGCGCGCCGGAG
GACCTGGAGGTGCTCTCCCACTGCCCCGCCACTGCCGACGCGGCGAGCCTCTCCCCGGCG
GCGAAGGCGGACTCGCGGAGCGCGCAGCCGCCGAGCTGGTCGCCGTTGCGGTACGGGCCG
TACCACTGCTCGGAGAAGACCTTGAGGCCGCGCAGCCGGGCGGCGTCCTTGGCGAGCGCC
ACCGTCTGCACCAGCCTGACCCGCACCTCGGCGTTGTCCGGGTGGCAGATGCAGTGCTCC
ACCTCCAGCACGGCCGCCGGGCCCTTGGGCCACGTGGCCACGTAGGAGCCCCCCTCGCCG
GCGTAGGCGAAGGCGGTGGCGGAGGAGGCGTGGCGCTGGTGCGAGGTGTGCACGGTGGCG
GCGTCGGCCTCGCAGCCGACAGTGGGGAGGAGGCGGACGAGGCGGTAGTGGAGCGCGCCC
GGCGCGGCCGGGGCGGCCCGCGGGGGGGGGG