Contig Data
morexGenes
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Map Locations of contig_2554659 (3637 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2554659

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39768 1 468 bp AK253095.1 Not available Available None
MLOC_39769 1 817 bp MLOC_39769.1 Available Available None





CDS Structure of MLOC_39768






CDS Structure of MLOC_39769






Contig Sequence (3637 bp)

>contig_2554659 3637 assembly3_WGSMorex_rbca.fasta
GGATACCACGGCCACCACTGACTCCGATCTACCGCCATCCGTCACAGCAATGAAACTTCA
TGTCTTGTTGCTGTCAGTGAGTGACGTTGCTATTTATGTGCACGAGTTAGCTTTGGTCTT
CTATCAGCCAGAGTAACAGTTGTGAGGGATAAGTATGTGTGTCAGGCAAATGTATGGGTG
ATTACGGGTCAGTCTTTTTTTACAAAGTTTGTAATATCGGTGTGAATTTCTGTAATGAGA
AGTTCCTATATCTGAATCACCCAAGTAGACTTATTTTCCCATGTGCCTGCATTAGGGTAT
CTCCAACGGCGATCACCAAACGGGCGCCAACCAAATGTCCGCAGGCATCATGACCAGGCG
CATCCAATCGTGTCCTTCAAATTTGCTCCTAAGTGCTTGTCTGGCTTTCTCTCTTTATCA
AATTTCCTAGATCAACAACGATTCGATCATACATTCAAATGATTGCACCCCCCCTCCTTC
ATTAATACTCCCTCTATAAACCAATATAAAAGTGTTTAGATAACTAAAATAATGATCTAA
ACGCTTTTATATTAATTTACGGAGGGAGTACTAGTAAAATCACCCGACATTCAATAAGTT
CTATACATTTATCGAACCCAAAAGCAAATGAACCGGCTGTCTATATCTAATGCCTCAATT
TTCAGCCTCCTTTCCCCCTCCTTTTGCGCAAAACGTACGTACATGATGTCTTGCAAGTCG
GAAACAAACTTGGCCGCTTCGGAGTCCAAGTCATGTGGCTCCACGTACAAGTTCTTTTGC
TCCTCGCACGCTTGCTTCATCGCAAGCTTCCTATCATTAAGCTCAATCTTTTTTTTTATT
TCCACAAATAGTTTCCTCCTTGATCTCATTGCACTTGGGACATGTCTCCTTTTTCTTCGT
CACGATGTCCTCAAACTTCTCTGTCATCTTGGCCGTAGTCCCTTCTCATTCTCTCATATC
CATCCCTTCGACCTGGCCACATGGGTGGCCGGTGCAAGCCCTCCTCGAACTACACCGCTT
GGATCACCACCTTCATCACTTACTTTGGCGTTGGCGGTCTTGACATAATTAGTAATGCTG
CTCCACTTGCTTTGCACAATCAAGTTGTACCAACAATGCATCATCGTGAATGTGCTCTCG
GTCTTGTCGTACAACATGGCCATGCGTCCGGGCTAGCAAAGCAATACAATGACATGATCA
AGAAGTTGCAACATAGAGAAAATAAATCAAATGACCAACACATAAAGCATCACTAAACAA
AACTTACGTGCTTGAGGAGTGACGCGCCAGTTGGTCACCAGTTTTCATTTGTTCATATGC
ACCATGATGAGTGTTGGCAGCGTCTTGAATGGTGTAACATTGAAGGCTTAGCGACTTCGG
ATTGTGATTTTGTAGCACTTCCTTATTGTAGGGCTCGTAGTGCTTTTTCTTAGGAAACCA
ATCATGCACACTTGGCCAAAGTGTCGATCCCTTTTGCTTTGTATTTTGAAATGGTTCAAC
ATTTGTGACTAACGACGGCAAACACAGTAATTCATCCTCCTTGTTAAGATATTCCAAAAC
CCTCTTTTTCAGTGTCTCTTGCTCCGGATGGGTGAGTAGCCGTCATATAGACTTGTTCGT
CTTCGATCATTACGGTTCATGTCCATCATCGTATCGCACCCGACCGTCGCCATCGAGCCA
GGGGGGGGGGGATTCCGCCAAATAATGACACAGCACCACCGGACGAGGGCTCCTTGGGCG
GAAGCCGTGACTGGATGAGTGTGGGCGACTTGTTGCACACATAGTCCACTCTCGACGCGT
GTCTCGTACTCATCGCCAACCTAGAGGGAATTGTGCGCGTGAACGTGCATCACATTGCCG
ACCTGGAGAAGACTATCATATTGTTGTCCTAGAGAAGACTTATGAGTTGCTCCATCATGC
CCTTTCCCACAACACTTACACCACAACTGAGAAGAAACTCCACGTACGAGGGACTGAGAG
GGATTATTGGATCCCGACGGCTTAGTGACTAAGCTTGTGAAGACTCATAAGCCCTTGCAT
ATTTACTGTTTTTGTATGTGTACTTTCCACAAAATTGAGTTTATTTTAATTAAGTTTTGC
ATAATAGGTTGCAAAAAAGCTCCCCATGAGCAGGGGAGGAATTACCTATCCTATGATGAG
CATGTCTTAATGACGAATGCTGATATTACAACGTTCAGTATCTTTTATTAGAGATATGAA
TTAGGTTGAGTTCTAGTGTACTTGTTACTTTTGAATGACTATACTGTGTTCCACACCAGT
AGTTCTGATTGTTAAGTGTAGGTTGTTGTTTTAGAGTACTTTTTTGGTTTCACTAGCTTG
TCAAAAAGAGAAACAAGATTATGAGAAGTATTTTTTTGCCAATTTTTTTAGCGTAGAACG
AATGGCAAGTAGACGTGGAACTCAAACCATGAAACATGGATGGTTTCGTTCTCCGTTTTG
AAATTAGCATTTGGGTAGATCGCTTTTGTTTTCTCTCGTAAGCCTTGAGCATGCTGAGCT
TTCATGACACGACACTCATAAAAATATGAGGTAAACGTTGTTTCATGGGCAAATAAGCTT
CCTTAATATTACACAAGAAAACGAAAGAGATTGTTTTACATGTTAAATTGAAAAAGTCTA
TGCGGAGTTCTAAAAATGTTGAGAGCCCCTCATCTCTCGTTCGATCAAGCTTGAATGTCT
TATTCTATTAGGTTGTTTTTCTTTCCGCGAGCACTCAAACAGTAAAGGCATGGGAGCCTC
TCTAGCCATTTTTCGTTAGAAGTATGCTAACACTCATGGCAGTTCTATATCAGCTTCGCT
GCAATGCCCTCATTTGATTATGACAAGTCGCCCTTGATGAGTGTGTTGATCCTATTCTTC
CAGCAGCGATTTTCCTCAGGGATGAGCAAAAGTCTAAGCTTCGGGATGTTGATGAGTGAA
TTTTATGTCACCTTTTGCTTAGCATTTTTTTCTTGAAAATAATCACAAAAGTTTCTACAC
TTTACCACGGCTGCTTGCCCCTTTTGCTTATTTCATCAAGATCCTAAAGAAGTATCATAT
TTTGAGAACGAAATGTAAAACAACTATTCTTGGTGTGAAAATATGCTGATTAGATGTCAT
AAAGACTTTCTAGACGAAGAGACGAAAGCGTAGGAGGAAAACTAGTCGTGGCCGGCTATC
CAGGAGAGGAGACGACGCACAGTACAAGCACAACCGCTTGTACCAGCGGTCGTACAACAC
GGCGCCACCTTCCCATGATGGACTACTTCCGCCCGGTGCAATCGCATCACATATGTGACC
AAAGGAGAGACCACAAACCACGAGACAGAGGAAGGAAACCTCATCCCCGGGGCCTCGTTT
GGTTAAGGGAGATTGGTGAGATTTTGAGAGGAAAATCCCCGGGAGGGTCAGAAACCCCAA
AGATCCTCGGGTGCCCATTTGGTAGGAGGGGTTTGCTTAGCCCAATCCCTCCGTTCCCCT
TCAATCCCTTCCTATCTATATGTTTCAAAACCCTCCTCGGGGGACTAGTGGAAGCAAAGC
CCCGGGGATTTGAGAGGATTGGGTGGAACAAAGGGATTCACCCAATCTCCTGAAATCCCT
CCCTCTCAAAACCTCGCCAATCCCCCTTAACCAAACG