Contig Data
morexGenes
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Map Locations of contig_2554377 (1821 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2554377

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39708 2 1555 bp MLOC_39708.1 Available Available LOC_Os09g30230.1, FRAME:+1, EVALUE:8e-117, 13109.m03018 protein disease resistance protein RPM1, putative, expressed





CDS Structure of MLOC_39708






Contig Sequence (1821 bp)

>contig_2554377 1821 assembly3_WGSMorex_rbca.fasta
GGGGCAATGCAGGCTTCGTACCTTCATAGCATTTAGCAGCAACACGGCATCATCTGCATT
GTTTCCCTCAGAATCTAAGTACCTTGCTGTATTGGAGCTATCTGGATTACCTATTAAGAC
TGTCCCAAATTCAATTGGGGAGTTATTCAACCTCAAGTATTTGGGCCTCGGCAATACCTA
TGTGAAGATACTCCCAAAATCTGTCACGAAGCTCCATAACTTGGAAACACTGAAACTTAA
AGGTGCACAGTGTGTGAATTTGCCCAAAGAGTTTGGAAAGCTGAAGAAATTGCGGCACCT
TCTTATTTATAAATATCTGGATAGAACAGGGTCGAGTTTCAAATATTGTGACCCCGTGGA
CCCGTTTGAGGGATTGTGGACTTTGAAGGACTTGCAAACTCTGCGTGCAGTTCGAGGTAG
TAAAGTATTCATTGCAAAACTAGCATGTTTGTCTCAGCTGAGGGGCCTTCACATTACTGG
GATAAGTGGCATCAACTGTGCACAACTGTGTGACTCTCTGTCAAAGATGCAACAACTCTC
ATTATTAGCAATAGAAGCCAGCAATGAAGATGAGGTGCTGCAGCTTGAAACTTTGACATT
GTCAAACCGACTTAAAAAGCTCTTTTTATCAGGGCGGATTTCCGAAGGAACATGGAAATC
TCCATTTTTCTCAACCAACGGGGATGCCCTTTACATAATATATCTACATTGCTCCCATCT
TGTGGAGAACCCAGTGCCACGCCTCTCTGAATTGTCAAATTTGACAGATATACGTCTATG
CAAAGCGTATACTGGACAGGAGCTAACCTTCCAGCCAGAGTGGTTCCCTAATGTGAAGAC
CCTTTCCTTGTATGATCTGCCACATGTCAATCAAATATACATACACGAGAGAGCTTTGGT
CCGCCTTGAAGATCTTCAGATTGGAAACCTGGCCGAACTGCGGGACATCCCTGCCGGCCT
GGAACATCTGAAATCCCTCAAAGAGGCGTGGTTTGGTGACATGCATCCTGATTTTGAAAG
GAACTTTCCAACGACAAAACTAGAGCATGTCCCGAAAGTTCGCTGCACCATACGGTAATT
GCAACGTCCTTAATTAGCTGGCCAATATATTTGGTTCGCCATTTTCATGCCATTCAATGT
GTGCTCGATCACCTGCACCAAGTTCTAGCTTCTGGACTTGATGAAATTTCGTTCTGCTGC
AGACCCGGAGAGGCATGAGTCTTTGTTGCATGGATGGGGTTTGCTGTCATCTCTGTGGGA
GCCATGTATCTCCGTGGAGGAATGGCGATTTATGAGAGAAGTATCATTCTTCTTTCTATT
ATTATTGATGTCTGCTTATGTAAACAAGGACTGGTTTGTAATAATGTATGGCATTATATG
TATTACTGCTATCCCATCTTTGGTTTTACATTATCTAAGTTTATAGTGGCGCTAAGCTAC
CGCGTGAGATAGCTCTTGTGTATTTTGACCTTTTTTACACAGTGATTCATGTAATTTAGG
ACAGTAAAACTGCACCCAAACGGAGCCCTCTCACGCCATCAGCCATTTTGACCGTCAGAT
TCGCGTTTGAACCGTTTTTTATCGTCAGATCTTCGTTTCATTCCCGCTTGGGCCGTTTCT
GGGCCTACTGTCCTTGGGCCGCTATTCCAGCAGCCGAATCGGATGCATCTCGTTCATTGT
TGCGGGTTAACGTCGGATCGCAAACGAACGCTTGTGATTCTGCTCGGTGCCCCTCCTACC
ACGCCCGCTCCGCTTTCCCCGACCTCTCGTCGCCGCCTAGGGATAGACCTAGATCAGAGA
GAAAAATAGAGAAAGAAAGGT