Contig Data
morexGenes
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Map Locations of contig_2554328 (3791 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2554328

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39691 1 368 bp MLOC_39691.1 Available Available LOC_Os09g32280.1, FRAME:+3, EVALUE:3e-17, 13109.m03212 protein thaumatin, putative
MLOC_39690 1 908 bp MLOC_39690.1 Available Available LOC_Os09g32274.1, FRAME:+2, EVALUE:3e-83, 13109.m03211 protein 30S ribosomal protein S16, putative, expressed





CDS Structure of MLOC_39691






CDS Structure of MLOC_39690






Contig Sequence (3791 bp)

>contig_2554328 3791 assembly3_WGSMorex_rbca.fasta
CGGGGGCCGGCGCGGAGGAAGAAAAAAAAGAAGAAAGCATCACCATGGTGGTCCGGACCC
GGCTCGCGCGGTTCGGCTGCCGCAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGCC
GCTCGCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACAACCCGCTCCCCGGTG
AGACAGCCCGCCACCGCCCCCCAGTCGATCTGTACACGTATCCCCGGCGCCCCGCCTAGA
ATCCCCACCTGGGTCGGCCCCGCTTAGCTGGGCTTGTCTGGGTCAGGATCTGCGATGCGA
TTTTGCGCGTGGGCGGCGGGAGCTCCAGTGCTGCTAACTGAAGGATAGCTGATGAGGAAA
TGCGTCCCTTTTTTCTGTTGCTGTCTGCAGGGAAGGATGGCGGCAAGAGGATGGGGCTCA
AGTTCGACCGGGTCAAGTGAGTTTTGCCTGCTCCTGGTTAATTTTCATTTCAGAGATTGT
TCAGTTTATGCTCCTTTTTGGAGAAAATCCTGCTTATTGCAGCTTCTGCTGCACCTACTC
TAGAAGTAACATGGAGTAGTGACACTGTTTGTTCATCCCAGTAGGCTTATTCTCTGATTG
CCGGTTGGGCATTTTAGAGGGTCAACCTAAATCAGCTGTGCCTTTTTTTTTAAACCTAAA
TAAATCGAGTCTTGTCGTTCCCATGCCTTTGTGGCGGTAGATTGTATCATTGGGGATGAG
TAGGTAAAGCAGAAGAAAGACAAGCTAGATTATCTGCTGTTGCATTATTCTAGTTGATTA
TAGTACCAATCGGCAAGCATCATTCAATTCTACGCATGCTGCCTCCCTCCACCAGAGAAG
TAAATTATCGATTTAGTGAATAAGGATTCAGTTTTTTCAAGGACATCATATATATAGTGT
TTGTTCATCCCAGTAGCGTTATTCTTTGATGGACGATTGCACATTTTAGAGGTTAAAGCT
AAATAGATTATGCCTTTTCTGTGAAACCTGAACAATTTGTGCCTGGCCGTTCTAATGCTT
TGTGGCGGTACATTGTATCATTGGGTATGTTGAGTAGGTAAAGCAGAGGAAAGACAAGCA
AAACTATGTGGTGCTGGACTATGCTAGTTGATTGGATGCTAATTGGCAAGCATCATTCAG
TCATACACTCGCTGTCTCCATCCATTGGAGAAGAAAATTATTGATTTGCTGAATAGGGGT
TCAGGTTTTTCAAGTACACCATTGATTGGATCCATAGCAGACTTAATGAGACTATTTGCT
AAAGATATGCCATGCTGTTTTTTGCGCCTGCCCTGCAAGACCACATGATACTATACAGCT
ATAGTGACACCATACAACTATACTTCTGTTGTAGGTACTGGCTATCTGTTGGGGCACAGC
CATCAGACCCCGTGCAGCGTATCCTCTTCCGTGCCGGTGTTCTGCCACCACCACCGTTGC
TAGCCATGGGCCGGAAGGGTGGACATCGTGACAGGAACCCCATTCATCCGATGACTGGCC
GTCCCTTGGACCTTGAGGGTGTCACGATTGTCGATGATCCTAATGCTGCTGAAGGTGATG
CTGAAGCATCTACAGAACCTTCGTTGGAGGCGTGATAGATTTTCTGTTCTGGCCTATGGA
GTGCTGCTGCAAGATAAAATAATTTGTTTGTTGTGCTTCTGATAAGATTATGAACACGTA
GTGTACGATATGCAACAATCTTGTCATGTAACTCTGCTTTGTTAGGCTTTGCTGCACCAT
GGGTTATCCGGCCGTCTCCAGTCTACTATGTCGTGTCCTAATATGATTCCTTTTGAATGG
ATTATGCAATTTGCGTCTTGAATGAATTTCTGCATTCCTTTTGGATGCTGAAGTTGACAA
ATAATCTTCTCGTAAGGTGCTGAACTGGGTGCCCCGTAATCATCTGCGGAGAACCAACAT
ATGCTTGATACTTGATAGTTATGTATGGTTATTCCTGCTGTGTGATCCAATCGATGCTTT
ATCTGATGTGGTTGCAAAGCTTACATATATTGCTTGATTGTGTAACTTAAAAAGGTACAT
CTTGTCTCGCGGCATCCTTGTGGATACCTGTGGCGTTTGTTTGTGATGATGTTCTCTTGT
GTGATTCCTTCCTTGTATTGGTCTGTTGTCTCACTGCCATGAAAGGCATGCTGCCTCCTG
GAAGCATCTTCAAAACAATTACTATGTCATGAGCTTCCCAAAATTCTGGACTTATTTAGC
TGAAGGGCATGTCGTCATTATGTGGAACATTGTACTGTTTCAAGGGTTTGTACTTTGATT
CCGATAATCAATATTAAAGAGCACACGGGAAATGTTCAGGACTGAATAAAAACATACTAC
TACCTCAACCTTAGTTTAAAACTGGGCCAGTTATTGTGGATCGGAGGAAGTAGTTTTATG
TAAAATGTAAAAAAATGATTCGTTCTGTGTCTTAAATCCGGACTGCGAGTTGGTTTCAGG
AAACGTCAGGTTTTTTTTTTTGTAAAAGGGAATTGATCAGCGTACGATGAATCTATGTAC
GATTCCCGTCCGACGCTATACTAATCCTCCATTGAATTGAACGGATGGCTCCCGTGCATT
GTCGTACGAAAATCGTACAGAAACAGTCGTATGTATAGCAGCTCTCTTTGTAAAAATGGC
ACGACGGACGACAGAAGCAGTCGACGTTTTATTATTAGGGAGAGATAAGACGTTTTAGAG
AACAGCGGTACTACCTCCGTCACACAGTATAAAAACGTGTTTGATACTATTTAATGTCAA
AAACGCTCTTATATTATGGGACGGGAAGTAGTATATAATTTGAACAAACAGCTACGTATA
TAATTTGAACAAACAGCTACTCCGTAGGTATACTCAAAATACCTGTTTGGCATTCATGTT
CAGTAAAAGAAAGAGCCATTTTACGTCACTGAAATGGCAGCAATGAAAAATCACAGAATT
TTCATGCTCTTATCCTGAATGACACTTGTGATTTATAATGACACTATCTTCGTTTCTGCA
TTGGGCTGTGAGAGATGTGCCCTGTCCTGCCTGCCCGCCAGCTGAAACCTGCGCTCTGCC
CAATTTGGCGCCATGGTTTGCATGAACAAGTTCAGACTGTACACCTCATCAAGGATATCT
AGCCAAGTAATCCTTGAGACTCACAGAAGAGAGAAGAGAATGTTTGACCAGGAATCAAGG
CATATTTCTCCTTTGGGTCTATCTAACTGCATGCCTATTTCTTCTTCCCTAGGCCACCCC
CACCATGCTAAACCAACCTCACCAAGAAAAGCAAAGCTTTCTCTGAGACATGGTTGATGC
CTTGATGGCAGCACTTCCCCTCACTCTCGTCCTCTTCTTTAAATCTTGTAAGCATCCTCG
CAATGTCTTCTTTCTTTCCTCCGATCGAGACCCCATTTTCTCTTCTCCCGTCGACGACGA
CGTCGGCTGCCGGGGTTTTCCATAGCCAACTCACGCCATGGGAGAGCGGAGGCATCACTG
CTGCAAGCTATGGCTCCTCGTGCTGGCACTGGCGCCGTGGCTCCACGCTTCGACGGGCGC
GACGACGACGTTCACCATAGCCAACTACTGCGCCTACACGATATGGCCGGGCACGCTGGC
CGGCTCCGGCACCCCGCAGCTGTCCACGACGGGGTTCGAGCTCGGGCCGGGCCAGACGGT
GCGGCTCGCGGCGCCGGCGGGGTGGTCCGGGCGGATGTGGGCGCGGACCGGGTGCGTGTT
CGACGCGGCCGGCGCCGGGGTGTGCCAGACCGGCGACTGCGGCGGGGGGCGGGGGGGGCG
CGGCGGCCGCG