Contig Data
morexGenes
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Map Locations of contig_2554250 (3153 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2554250

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39670 3 773 bp MLOC_39670.1 Available Available LOC_Os04g40670.1, FRAME:+1, EVALUE:2e-32, 13104.m03968 protein expressed protein
MLOC_39669 1 1172 bp MLOC_39669.1 Available Available None





CDS Structure of MLOC_39670






CDS Structure of MLOC_39669






Contig Sequence (3153 bp)

>contig_2554250 3153 assembly3_WGSMorex_rbca.fasta
CCGACCCCCCTTGCCCTCATAAGCGCCGTGTGGCCCTTCAACACCTCAGTGTGTGGGGAG
ATGGGGGGCCCAACCCCCCCCCCCCCCCCCAATTGTCTTCAATCCTCTCCCTAACGCTCG
AATCGAATGCAGAAATCCAATCTAAAGCGAGAATCGAACGCGCTGGTGAAGCCGGTGAAC
GATCTTGGTGCTCACCTTGCAGTTTCACTGGTGCGCTGAGAGAAGGCGAGGGTAATTATG
CTGCCGCTTCGGGAAACAATGCGACTTCTCGATATCACCTCCTCGCGTGTAGCCTCCGCA
GCCCACGTGCCATGAGTTGCATCACTCGGTCCTCGCTGTGTAAAAATGACCGATTCAGCC
ATTCCCCCGAAGCCAGGCCGAGAGGTGCTTTAAGGCTTGTGCGGGCCAACATTTTGATGC
GACCCACACAACCGAACAACCCATTTTCATACTGCGCGGGTCTGATGGGGTGTATGCGGG
CAACCAAACCCGTCCTAGATTTCTCTCAAACTGTACTGTATGTCAACTTGAGATGATTTC
TAGATCTGTAATTACTATTGATTGATTGCAATTTTTCAAACTTTTGTCTATTATTTAAAT
TTTGAACCAAAAAGGTGAACTTCGAACTAGAGCGGCAGGCTATGCCTATGATACTGTTTT
GTCCCCCTTTATAAAGCAGACCTCCTGGTTCCTAGTACCCCCATAGAGAAGGTTCTCTCA
ATCCATATGTTTAATTTGGGCAGCAATTTTACCACATGGATCATTTAATCATTCATGATT
TACTGAAATTGTTCAATATTTTTTGCGCGGTTCGAATTTTGAGGAGTAACGGTTTTCAGA
GTTTAGTTTGGTGGGGTGAAGCAATACAAGTTTGGAGTTGTAATGGGACCCCTACGACAA
GTTTATTGGGTTAAGTGGGCTTGCCACATGATCTGAGCGGTAGTTAGTCGTCCGAACAGT
TTTTCCTGCAATAAACCGTGTAGCGGAGTTGATTCAGGTTGCTTCAAAAAAGCTTGGTTG
CAGTCTCACGGGGCGTGTAGAGCAACAAAGAACGCAAATCCTGAACTGGCAAATTTAAGA
TTGAAATCGCTATCTACTAAGTAGTAGCGAGGCGTCGAACAAACTGTGCGGCATTGTTCC
GAGCAGATTCAGAAGTTAATGTGGCTGCAGCCTCAGTGTGTGCGAGCTACATGCAGGTTT
GCCCCTCAACACCTTTTGCAGCATTGCAGCAAATACCAGATCGGATAGACTAATAAGGCT
TTAGTAAAAGTTTAAGCTTAAAACCGTTCTTGGCTGGCGATAGTTGGGTGTTGATCTAAT
CAAAGTCTTTCTAGCTAGGATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CCTGGGAATCAAGAAGTAAATCCCATACAACTTGTTAACAAGCTGCTTATTTTCGGAAGC
TGAGCAACAACGGTGTAGCTTTTGCCTTGCTGCAGGATGGATAGGATATTGTTATCCACT
GAATCTTCTCCTAACCTGTTCCGAGCAATTCAGAACTGTACGCATGCAGCAACAATTCAA
TTCAGTCTGCATTTCTTGCTGTTGTGGTTTTGCTGACAGTGTGTCTGTTGCTGTTGTTTT
TTGTGGTGGACGCAGAACATCCACTGCGGGGAGAGCGTGACGATCGAAGGGCAGGCGTAC
ACGGTGTCGGCGGTGACGCACCGGTACCAGCTGCGCAAGGGGCGGTACGAGCCGAGCGAG
AAGCGCCTCGACGTCCTCTCCACCGGCAGATACATCCTCAACCTCTACCTCGACAGCCTC
CTCGACAAGTCCTAGATAATATACTACCACCACCACCACCACCACCACTACTACTACAGA
TTTATCTATTCCAGCAAATTAGTACTGTACGTACGCTACTTGTGTGATGATATAAAAATG
CTTACACAGCAAAAAGTACATGCGCGATGAGCCCACGAACGCACGATCAAAGCGATCCGA
TACTTTTGCCCTGGACCACGGACGCGATGTTTTTCTTTTTCTTTTTCGATGTTGCTTCTG
AGTATATCCTCTCCTCTCTCTCAGTAGGAGTAGTATATCCAAAACTAGTACAGTACTTAT
ATATAGCTTACAAACATCAAGTTGGGTACTGCTGATTGTAAAGCGGTGTCGCTCACTACT
CCACCGAGGAGCCCGCCAAATCGCGATGACAATGCTAAATTACATACGCCTCTGTCGTAC
CATAGACACGCCCCTGTCGACGTGCGTGGACGAAGCCACGGATCCAGTCATCAAGATAAC
TACTACTACTACTACGCTGCAAACAAAGGCACCGAGATAGCTGTGTAAGGATGCAACTGG
ATGCCATGTTATCAATTCATCATCATCGTGCGGAGTCGTCCATGTGATTGCACCTGAAAT
AAAGCCACAGCGACGAGCCGTTTTTTTCTTCTTTTTTTGAACGAAAGATTTTGAGACAAA
GTTTGAGCTACAGGTGCAGCCAGTGAATCCTGAGGTGGATTTTTGTCACGGGTCGACGGA
GCCAAAACGGTTTGGTTTACGTGCACCACCTGGAACATCCATCGCCGCCGCGTGCGGGCC
GGAAAGCGACGGCCAGCTTTTCCGACGCCTCACTGACGTGTCAGCCTAGCCCCATCCGCT
GCTCCCCGCTAGCCGTCCGTCCGACCCACGTGAGCCCGCCGCGTCCATCCATGCACCACC
CACCGGTCCATACGCCCGTTCCACGGACCCGGAACCCCAGCCCCGCGACAACGACACGCC
GCGAGGCCGTCAAGCATCGCTGCCAGGTGGTCCCGCATTAATGTTACCGAGATTTTTTAA
AATATATATATTGGGAAGTAAGAAAAGAAAAGAGTTAAGCCCGGGGGATTAATAACTTAC
GTAAGTACGTAAATGCGGTTAGCAAAGGCGGCCGATTATAAACGATGGGTGTCAGAGCGG
GATAGTAGTAGTAGCCCGATAAATAAAAAACTACCACCCCCCCACCCCACCCCACCCCCG
TCTCGCCCCGTCTCGCCTCTCCCCTCGCCCTCACCGCGCGCCGCCCCCCCCGGACCCCCC
CCGCCCGCTCCCTCCGCCGCCCCGAGCCCCCACCACCGACGGCCATCCTCCGCCTCGCCA
GCGCGACTGGCCGCCCTGCCAGCTTCCACCAGC