Contig Data
morexGenes
Links



Map Locations of contig_2554247 (3559 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2554247

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39668 1 601 bp MLOC_39668.1 Available Available LOC_Os01g03680.1, FRAME:+1, EVALUE:2e-21, 13101.m00319 protein BBTI8 - Bowman-Birk type bran trypsin inhibitor precursor, expressed





CDS Structure of MLOC_39668






Contig Sequence (3559 bp)

>contig_2554247 3559 assembly3_WGSMorex_rbca.fasta
CCTATTTCTCCAATGCCCACTTGCCAAAGTTCTTTGACAGACGGTTCACATAGCCTTTAA
TATTATACCTCTGGATAGTATTGATACGTTATTTGGAACGTGGCTAGATGAAGTTGATTC
GAGTATTGCTAAACACATTCGCATTAGAGCTTGCGCACTTATGTGGGCTATCTGGAACTC
TAGGAATGATGTGGTTTTTGACAGATATACAAATATACATTTTTTGCAGGTACTACACAG
AGCTGCGGCATCGATCCGTACCTGGTCATTACTCACTCCTATGAAAATCAGGGAGCCTAT
GGTTACTGGATCTATCCGATGGAAGACGGTAGCACGGGATATCTTCAACCGGTTTGGATG
GCAGTCCACTAATAGGATAGATGAGTAGACATCTAGGCCTATTTTACCGGTTGTGGCACT
TTTCTTTTTAATTTTCCATCTTAATTTAATTTTATCAAGACTATGTTGAACCATACTTTA
TTTGTTTGTTTAATAAAGGGCCGTATGCATCGTGCTGGTGCAGAGGCCGGAGGTAATCCT
ACTTTAAAAAAAATACATAGACAGGGTTTAATCTACAGCCGAGCCACGCATCCGGTCTTA
TCTGTGGCAGCTTCGCCGTTGGTCCGACGGGGCTACTGGCTACATATACAGGGAGAAATG
GGACGGGAACGTACGCCACAGCACCATCATCTAGCAAAACAAAAGGCAGTAAACCAGCCA
GCCATGGCTAGACGCGCGGCAGCCATCCTTGTGTTGATGCTCTCGCTCCCGGCGGCGGCT
CTCCTCGTCTCCGCCGACGGCGCTGACGCGGACACCATCCTCCTCCCTAGCGACGGCGGC
GATGGTGATGCATCTCAGGATCCAACAAATCTTAAATCTCTGCTCGTAGTTCATTCAGCG
TACTGAGCACGTACGTACGTCGTTCGTTCAGGTCTTGCAGCAACACCTCCTGACATAGTA
GTGGCGCCGACGGTGAGCGCCGCCGGCGGCGCCCTCGAAGCGGAGAGGCCGTGGGCGTGC
TGCAACGGCACCGTGTGCAAGGAGTCGTTTCCGCCGATATGCCGCTGCCTGGACGAGGTG
AAGGAGTGCGCCGCCGCGTGCAAGCTGTGCGAGCCGTCCGGGATCAACCACACCTGCAAC
GACTGGTACTTTGGCGACCCAGGGCCAAAGTGCGCCTAGGAGGAGCGGCCGTGGACGTGC
TGCGACCGGACCGTCTGCACCAAGTCGTTCCCGCCGACTTTCCATGCATAGGCCTACTGT
TAATTGCGTGCGTGCTTGTTTTTCTTCCCCGTGAATAAAAACCGTGTGTGTTTCCCCACG
TAAAAATAATTGTCCCTTGAATTACACATACACGAAGGATTGCTTTGCAAATAAACTATA
TCTTCATCATTGTTCAAAAAGAAAAAAAAACTATATCTTCATCTCCAAAGAACATCTACA
TCTTGGGACCCCTATTTCCTTCCTAAACGCTCGAAACGCTCGTCGAGGTCAGTGTTCCGT
CAAGAAAAATGACACAACAAAATCCTATACTTCCTAAATGTCTAGACCGACCGGTGTACC
TCAATCTGAAGCCAAATCCAGGGGCAATATAAAGACGACCAAACAGTATGCTTCACGTCA
TAGCCATCCACACGGTCCCACATGCAGCCACCCAACCCTCTCTCATCTTGACGTCATGGC
CATCCACACGGTCCCACCTGCAGCCACCCAACCCTCTCTCATCTTGACGTCATAGCCATC
CAGACGGTCCGACCTGCAGCCACCCGACCCTCTCTCATCTTTACGTCATAGCCATACAAG
GAGTCGCTTCCTCTTTTTTTTTTGCATATTTCTGAATTTTTAGAAGAATTTTTTATAGGC
CCCCAAAAATTCTCCAAAAACAAACGAGTTGAAGTTTTGCATTAGGAAGCTTTCGGAGGA
GTGAAGAAGCAGCACAGGCGGCCTACACCCCCACGCACCCCACCACGCGGCCATGAGTGT
GATGGGGCCACATGGGGCCCATGAACCTCCGTTCCACTACCTCTCGACACCTACACTATA
TATATGTATATATACATACCTAAAAATAGCCCTGAAATTTTAACACTATTTTTTCGCCGT
CGTATCTCTTTATTCCACTAATATTCCAATATAAAGGCCTTTTCCGGAGCTCTACCGTAG
AAAGGATTCTTCATGGTAGTCATCTCCATCAATTTGAAGGCCATCATGATCACCCTTGAG
TAGTTTCTTTTGGACAATGGGTCCATAATAGTAGCTAGTTAGTTTTCTCTCCCATGTTTC
TCAATATAGTGATCACATGAGCTTTCCTACATGATGGAATCCATATGATGTAATCTGTTT
GATTGTTTGTTGTGGTGTGATGAATTTATCACTTATGATCATATTTATCCATACATCTTT
TTGAGATTTATTTTGTTTCTTTACTACATAATTATTATTCATATACGCTCTTCGATCTAT
TTATCAGTTATGCTTGTTGGATAACAGTCTTGAGTGGAGTATTAACTATAGATGCAGTTG
GATAATAATATGCTAAATATTGTGACATCATGCTCATATGTTAATTATGACATGAATACA
TAGTCATAAATATTGCAATTTAATCAATACTCAAATATAATTTGTTCACCACACCATGCT
TTCATATGCAGAGAAACCACTAGCCAACATATGGATCCCGGTTCATCTTCATCTTATAAT
TATCCAATATAAATCAAAAACTCTTTTCAGTTCTTTCTTTTACTTTCTTGTTGCAATGAA
ATCTTCCATACACTTGTGCTTTAAATCCTTGTAAGTAGAATAGCTAGTGAGATTGACAAC
CTCGCTAATTTCATTGGGAACCAAGGTACTTTTGTATCTGTATGTCTGCAGGTGTTGGTC
ATTGGCTATGTTACTAAGGGCCAGTTCTTCTGAGTTCTCCTGTGGAAATAAGCTCCTGTG
AGAATAAGCTCCGAATAAGCTCATGATAATAAGCTAGTCGGTTCTTTTCTGTGCCTGCTT
TCCAGCTTATATATGGTATGAGTAGTGAAAGTCTATAATACCTTTGAAGTGGAGCTGGAG
TGGGTTGCTGGCTGGAGTAGGGCAGGGGACGGGGGTCCTTTGCTGGAGTGGGTCGTCGGT
CGGTGTTGGATGCCGTCTGCTGGAGTGGAGCCTCGGCGTCCGCCGGAGTGCCGCTGTTGT
TGCTAGATCGCGGAGAAGGGTGAAGTCGCACCAGAGGGAGTGAGGGGTCGCGCCAGAGGG
GGGAGAGGAGCAGCGATGGGAGGCCTACCCGCCTGCGAGAGGGAAGGACCAGGAGTGGCG
GTGTCGTAGGGAAGGGCGGCGACGGTGGAGGGAAGGACCGGGAGTGGCGACGGAGAGGGA
ATCAGGAGCGGCGATCGGGAGCGGCTCGATTCGGTTTTCTACGGTGGGACGAGGGGTTGG
GCTTGGTGGCAAACTCATTGTAATAAGTGTTGTTTAACGTTGCATGGGAAACAAAAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCTACGAGAGGAGATTAAATCCAC
ATACCCTTCTAGATCGCTA