Contig Data
morexGenes
Links



Map Locations of contig_2554216 (3381 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2554216

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39656 2 894 bp AK249008.1 Available Available None





CDS Structure of MLOC_39656






Contig Sequence (3381 bp)

>contig_2554216 3381 assembly3_WGSMorex_rbca.fasta
CGACGGCGACCATTGCTGTTGCGGCGCCGGCGGTGGGTGCTGCGGCTGCATGAGGGAGGA
GTACCCGGGCTGCGGCTGCGATGGCTGCTGCCGCATGGAGTATGCTCCGGCTGCGGCGCG
TAGTAGGACACGCTCGCTGCCGGATGCGCCGTGTGGTAGCTCGTCACCGGCTGCGGCGCG
TTGTACGGGCTGAACTCCTGGTGCGCGGGCGTCGGCGCCGGAGATAGGGACCTGTCCGCC
GCAGCTGCATCCTTAGGCTTGCTCTGTTCCTCCTTGGCCTCGCCCTGGTCATTGCCGGCC
ACCTTTGTGTCCTCCTTTGCTTTGGGCTCGGCCGCCGGGCCCTCGCCGTCGCCGCCGTCT
TTCTTTGCCTCAGCGCTTGGTTTCGTGGCTTTCGCCTCCTCTTTCTCATCCTCCTTCTTC
TCAGACTCTGCTTCCTTCTCCGTCTCAGGCGTCTTGTCCGGGGCCGTCTCCTCCTGCTCC
GGCGTCCTGTCCGAGCTGTCGTCGGCCTGCGGCTCCTTCACAGGCTCCGCCGGGTTCTTG
TCCGCCGCCGCAGCAGCATCGTTGCTGCTGACCTCGGCCGGCGGCGGGGCCTCGGGGTTC
TTGGCAGGCGTGTGTTGCCATGGCAGGGCCTGCTTGCCAGACTTGTAGAGCGTCTTGACG
AGCGTCTCGGCGTCCACGGTGCCCGTCACCAGCACCTTGTGCTGCTGGGCATCCACCTTC
ACGTCGTGCACGCCTGAACCAACATCCCAACCAGAACAAAACGACGACCACTTACACTTA
GTAGTTAATTAACGCGAGGATGAAAGAAGAGAGTGACTGACGCTAGCTGCGTACCTTGGA
TGCTCTTGAGCACCTTGCGGACCTTCTTCTTGCAGCCATGGCAGTGGATGGACACCCTCA
GAACAAAGGTCTGCACGCAGCAGATCCAAGAAACACGACGTACGTCAAAAAGAGCAACTG
ATTCATCTATGGACGGGAGCGGAGCAAAATGGTGTACCTGCACGGCCGGCTGTCCGGACG
CCATGGGATGGGATGGGAGTAGTGCGCTGTGGGAACTCAGGGGAGGCCGCTGCTGTGTGC
TGCTCAACTTATAGCGGCCGGATGGGGATCCGTTCATACCTCACTGACACGTACGTTAGC
ACAAAAGGCGGCGGTGGTGTATCCGTTCAGTTCTTAGGTACTCCCTATGACATGTACAAT
GATGTAGTCTTAGCAGTGTAATGTAGAATAAATAATATGTTGTCTTAGCGGTGTAATGTA
GAATAAATAATGAGGTGGACGAGGTAGAACTTATAAGAAAGTATTTATCTTCTTTTATTT
AAGAGATAACAAAGATGACCTCTTAGCACAATATGTCTCATCATGTTTTTTAAAATAACT
AGTTATTGAAGATAAGGTTAAAAGATGACCCATTGTAAGATATATTTATTGTTATCTCTG
GTTTGATCTATTTACCCATTATTCCTTAATAGAGTTCTCGAGGTGCCAAGTAGATGTGTC
AAGGTCTTTTAAATATTTGCCTCTCTCATGCTACCGAGGGAGGCATGTGTCACGGTTATT
GTTTTTTTCTCTTTCTGAAACACGGAACCAACATACGAATGATTTCTTAGAGTTATTGTT
ATTGGCCTTTTTTCTTTAGTTGCACAAGGCGAGCCTGAACCACAAAACATGCATATGAAT
GGTGGAGAGTTATCTTCCTATCCACAACCACAAGCTTTTTTTTATCGTGGCCTTCGGGGT
ACATAAGATAAACTGTCCATATCTTTGGTCACTTTTCTGTGTACTACGTCCTGTTGCACT
CATGTGTTGTGTGACCAACAGCTGCCTGCCTGCATGATTGTTGTGAAACACGGAGCCAGC
ATAAGAATGATTTATCAGATGCAGTCGTCGTAGCATTATTGTTACACATCCATCAGCAAG
TTGTACTCTATGCCTATCACTTGCCATTTCGTGGCTCTGATGGGCGTAGAATTTTGCACT
AGATGTATACTCCCTCCGTTTCATAATATAAGTCTTTTTAAAGATTTCACTAAAAGACTA
CATACGGATGTANNNNNNCATACTTTAAAGTGTAGATTCACTCAATTTACTCCGTATGTG
GACCCTTAGTGAAATCGCTTAAAAGANNNNNNNTTAGGAACGGAGGAAGTATATAGGAAA
TAGTTCTGGGCGGCTCTGTTTTGTTAACTGAAGTTTTTGTTCCTCCAGAGCGTGCGAGTG
TGCCGGTTTTGTTGGTTGCTGGGGAATTGAAAGGAGAGAGCGGCACGTCTCCGTCTCCTC
GCATTCATTCATTCATTCATTGGTAGGTGGGGAATTGAAGGGATAACATTAACAAGTCGG
GGTGCAACCAACACTCAAGAATACGGCGCCTGCCATACGTACTCGCGTCAGGTACCCACC
ATTCGTCCGTTTCTACAGAAACTCCGTTGTTTGCTGCGTGTATATATTGACACGACTTGC
CGATGGATCGGTTGATGCACGTATGGTTCGATCGGGCATGGCGCATGCCATCTGACAACT
TTAATTGTTTGTACGTAGGTGCTGTGTCTACGTTCCACGTCATCCCTCATACACTTGCAA
CGGTGCTGCATGGGCCGGCCGGCCGACGATCACTTGTCACCATTCTTTTAACGTAATTGA
TCAATCCCTCCCTCCTCATTCGAGGTCTGCTTTAAACTGTTCTCGTCAAATTTGTTTTCA
AAACCAGGTAGCCAAATGCTAGCGCTTGCTTTGGACAGAGTCTGACTCGATTTGATCTGG
GAGCGCCGGATCTGAAACATAGTAATTGTGCATGATTAATCATGTACGTCTCCCTCTCAT
AATAGAGTAAGTGCTCTTGATTAATTAGCATGATGCATCAGCTAGCCATCCATATCTGTA
AAGCTCACGTACTGTTGTCATGTACTGTTGTTCGTTGATTACTATCGGCTAAGCTTCAAT
CGCACGTACGCTGCAGCGCTAAGGCTGATTGTAATGAGGAGTATTATATATTATATCATG
CATATAATACTAATGTATGATACTACATCCGCAATGCATAGCATTATATATTAGTATCAT
AGGATATGTCATTTATTAACATGCATGACACATATTAATACAACTTTTAATATGATACAG
TATCATGATATGATATTCAACTCTCTCTTTCTTCATTTAATTTCATATCATTTTATTAGA
ATTACTTGTATGATACTACATACTTATAATACTATCATCATTACAACCAGCCTAAACAAC
GCCAAATTTGCCACCGTGAGGGTCAACAAATAAATAACACGCCATGCCAAGTCGTTGGCT
GGCTAGCAAGCGCCAAGTCCTGGGACACACACTAGTGGGGACAGGGCCTTTAGTCCCGGC
TCGTAAGGGGCTTTAGTCCCG