Map Locations of contig_2554172 (3602 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2554172

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39648 1 365 bp MLOC_39648.1 Available Available None





CDS Structure of MLOC_39648






Contig Sequence (3602 bp)

>contig_2554172 3602 assembly3_WGSMorex_rbca.fasta
CCCCTGCCCCCCGCCCCCCCCCCGCCCCCCCCCCCCCCCCCGCCCCCGCCCATGTTGGGC
GCGGGTCGAGCCGATGGTCACAGGCGGGGAGGGGCGGAGGATTAGAAGCGGAGGGGAAGG
CGGCAGCCGCCAGCCAGGTTGAGGCTGGTGCTCTCTGGCTTTGACCGGGCGAGAGGAGAG
GTGGGGCGCCGCGCGACGGCTGGCCTGGTTTATGGCAGGAGCCGCGGGGCCGAGAGCTTC
CGTCCGGTCCAAGTGGCGCGGGAGAAGGCGGAGGCCGGCCGCGCGAGCGCGTCTGATCGA
TCGATCGATCCGGCTGGAAAACGAAACGATGATGCGTGCCAGTCTGCCGGGGTATGAGTC
GGGTGGTGTTTGGCTTTGTCCCTGTCTGCGCGCTGCGATCGACCCGCGAGGCGCGCTTGG
GTCGGTCAGGTTGGGTCGGGTCGGGGCGGGGCGGGGCGTTTTCTGGCTCGTTGCGCTGAG
CGCGACGGGGTCCCGGCCCGATCGGTGCGGAGAGGTGGGGTTCGTTTCTTGACTTGGAGT
GATGAATGATGACTTTTAAACAAACCGCCACGTATGAATTTTTTTAACACACAAACGTTT
ATATAACATGCATACACTCATATTTATAAACATACACACGCATATCTTATTCCTATGAAT
GCCTTCGAGAAATTAAAGCGACATATTATCTTAAAATTTAAAATTTACAAAGTCTTGACA
TATCATCTTAAAATTTACAAAGTTGCGACACATCGTCTTTGATGAAAACATCTCATCCGT
AGCATCGGAAAATTTAAAATAAATACAAGAAGAAATATGAGCATTATGATTTAAACGCTT
GGATATCACATTCTATTTAACCAGCCTCTTCAACCATCCAACTACGTGTTGAGTGTATGA
TTGATGGGGCGAATAATGTTGTTGCTGCTGCAGAGATGGTACGTAGTAGCATGTGTTTGT
TTTTGTGTGTGTGACCGTTGATGTTGATGGAAAGACCAGACCAGGTATACGTACGCACAG
ACTTGTATCTTAGGCGTAGTCATGCCACACCTGGCGACGCGTGTGTCGCTTTGGCCGGCA
CGTAGATTTTGTCTGCGTAACTACGACATTGACGTGTCCGGCCGGCCTCTCCAGGCTCCG
ACCGAGATGACGTGATCGATAATGTCATGTGACTCAGCATGCGCATGTTTTTCAAACAGA
ATCTTTGTAGACATATGATACAGTATGATATATTCTCTTTGTTTAAAAATATTCATCGTA
GGAATAAATGTATCTAAATGTATTTCAATTTAAATATATTTATACAACAAATAAGTTTAA
ACGAAGGGAGTACTTACCGCTCCTTCCCTTTTTAAATATAAAATTTTAAAGGTTTTTAAA
ATATAGATTTATTGATTTTTTTATATGTAGTCATTTAGTAAAATTCTTAAAAAGATTTAT
ATTTGCAAACGGAATATATTTCAGTTGTTGTCTTTAGTCTTATTAAGGTGTGGTAGTTTG
GAAGGTGTAGCTTTCATATAACTGTGTGCACGCAACGGCACTCACCGGGAGACTTCTTTT
GCCTTGTGGCGTGTTTTTTTTACGCTGAGAATTATGTTAACTTAGAGTATCTACGACTGG
ATATTGCAAATATGATCTTTAAACGTTTATGGACGCTTCGATCAGTGACTGGGCGTGTCT
TTTATTTATTCATATGTGTGGTCATAGTTTTTATTTTCTTCCTTGTATGTCCGGTCACTT
GCACGTGATTGATGAAGAGGAAAAGAATGAATAAATAAAAGAAAAAGGTAGTTCGGAGTA
GGGCCGCGTCCTATGTGGCGGACTGACCGGCCACGTTCGGATGCGTCCGCGAACTCTTAT
ATCCTCCCCATATTTGAGATGTATATGAGGGTTCGCAGACAGTCCGGACATATAAGAACG
ATATGAGGGGTCCAATTTGATCACTTTTTTTCTTTTTTTTCTCGTATTCGGTCACTGACC
AGGCGCGTTCGTGGACGTGTAAGGGGTCATTTGAAAGGTCCAGCTATAGATACTCTTACA
AATGTTCTCATGCATCAACCGACCCCGACGAAAATGTGTGTGAGCCTCGGGATCATAAAT
CATAGGGAGCTCTACGTGTTGCCTATTCTCTTCTTCACTGCCCCTATATACGTGCATGGC
CCGATCACCACATGTTGTTGAGACCGCAATGCCTCATGTGGACTTCAGTTTCATCTCCTA
AAACTACCCATAATAAGAAGTAACATAGAGTAGTACTTTCTCTGTCTGAGTTTACATGGC
ATGCGCGTGATTTTAGGTTGAAAATTTAACTAGCTAAATATATATCATATGTGATGAAAA
ATATATGTTTAGAAACTACATCCGCTTAAGAATCTAATGGTATATTTTTTGTGACATATA
ACGGATGTTTAGTTAGTCAAATCAATGACCTAGAACCACACGCATGTTTTGCAAACTAAG
ACGGGGCGTAACATACATATGCTATCAATCCAAGTTACTACTTTCATAGTGAGTAGTAAT
ATTGAACCTTTTATTTATTATTAGCTTATAGACTCATCTTGTCTTGATATGTGTGATGTT
ACTCATAGTATGAGTAACTAGCTATGTTACTCAATTTCTCTTTCTGCTCATGAATTAGCT
GTCACAACATATTATTCGATAGGGTGACATCTATGTTACTACATACTCCCTCCTTTTCGG
TTTATAGGGCTCGTCTAAAAAAATAGATTTTTATTATATTAGGCTTAATTTTTAGTATAA
ATGAGTCAAAGTATTTTGAGTCTCACATTGTATTTAATTCATAGAGATAAGAGGAAGGAA
TTAGTGGCTATGCATGCATCTTTCCTACATGCATCATGCAAGTCCAATGAGAGGGAGAGT
GCTACATTTATTGCTTCGGAAATCAAATTTGTGAGAAATATTTCACTGGCTAGTTAAAAC
TAGTGCCATCCACTCACAATTCATCTTGGTTGATGGGATTTTAGATTTGAGCCCTATACA
CCGGAAAAGAGGGAGTATATTACTCCCATTATGGGTAGTCTAAGTCGTTGAGAAGGTTGT
GGTTATGGTGAATGTTGCCAACGAGAAAGCGAGGTGAACAGCAGGGGCGGCTCATGTATG
GTGGACGGTCATGTTCTCATGCAACTAAGATGTCGTCTAGTACGTGGTCGATTGATCCTC
ATCTGATATAGTGGATGATGGATATCGATCGGTTGGGATGGGATGCCGCGTCCAACAAGC
TGGTACGACTTGGTGGAGGAGGGCGATAGCCGATCAATTGCAGTAGGGTAGTGATGGGGT
CATCAACTAGTGGTAGGATCATGGATCGGACATCCAGGGCCCACCTAGGGCCCCGCATGG
TCATTAAAATCTCAGGACTACATATGCATTCACATGTACACATGGATCCTGTAGGATCGA
AAGTATGTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACTTAGCCTTTTTCC
AATTTTAGCTGTGGGCCAGTTTTACAAATTATAACTAGTCAAGCACACCCTACATATGCA
CATCTAAGAGTATAGCAGCGGAAAGTAAGACATGCAAATATAAAGTAGAGGGTAAGGTAG
GG