Map Locations of contig_2554106 (2959 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2554106

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39632 1 1342 bp MLOC_39632.1 Available Available LOC_Os02g39360.1, FRAME:-3, EVALUE:7e-97, 13102.m04351 protein B-box zinc finger family protein, putative, expressed





CDS Structure of MLOC_39632






Contig Sequence (2959 bp)

>contig_2554106 2959 assembly3_WGSMorex_rbca.fasta
ACGTTTTTAACCCTTGATAATATATCCGACGGTCCTGGATCTGCCCTCTCGTGCTTTTAA
TCTCGTGCTTTTAATAGTACAGATAAATTTTTATAAAAATTTCGTTAACAAGGGAATTTA
TATTTTTTAAAATATTTTTATATATATTCATCAGTCTTTCTTAAAAAAGACGGAACGGAG
GGAGTGGTCAAAAAGTTGAGTGGAGCATCACAAGCGTGTAGTATTTCACAAAGCTCAGAT
CTTCGGATGATTATTATATGTCACAGTTGAGTTCAGCGATGCTACGTTAAGATGCACAGG
GCACAGTTCGACAGAACACTAGCTTTTGTACACAGCTCCTCTCTGTATACAACAACACTG
CAAAATCACACGAGGAAGTACCAGAACCTAAACCTAGGAGTATCGCTTAGCCAAGATCAG
GTACGATAAAGAAGTCCTCGTCATCGGCGATCTCGACGCGGGCCTTCTTGCTCTGGCGCA
CGCCGGCGGTGGCGGCGACTCTGCTCTGCCTGTAGTAGGCCGCGTCGTCTGCCGCCTGCG
AGGCAAAGAACTCGGGTACCTCCATGGCCGCCCTGCCGCCCTTGGGCGCGTGGTCGTGGA
AGAGCTCCATGTCGGCGGTGAACCACTCCAGCTCCTTGAAGCCGAGAGTCGAGTCCTTGT
GCAGCTGCAAATTAACACGAGTATAACATGAGAACAAGGTCGAGACGGAGCCCTAAACAA
GGCAAGCACAGACAGGAGCACCGAGATCATCGTATCGGCGGTGGGGTTGGATTGTTACCT
TGTCGCTGGACTCGTAGTCCGAGAACTGCAGGAGCTCGTCCACGGCCCAGTCCTGCGGCA
GGAACTGCGGCGGCGAGGGAACCTGCTGAGCGCTGGCGGCGGGCTGGGCCGGCGGCTGGT
GGTCGCAGGCGACCTTTGGCGGGGCGTGGTGGTCGGCGTCGTGGCTTGCGCCGTGGTCCC
CGGCGGCGCAGGTGGAGACGGGGCCGAGGCCGACGCGGATGCCGGTGGCGAGGTAGCGCT
GGTGGTTCCCGGAGAGCGTGCCTGGGACGTGGATGGGCTCGTCGCAGTCGCGGCAGAAGA
GCGCCCTGTCCTCGACGCAGAAGATGAAGGCGGCCTTCTCCTGGCAGATGTCGCAGCGCG
GGAGCTTGGCGCCGAGCGCGTCGAGCGGGAGCCTCTGGTGCTTGCTGGCGAGCTTGTTGG
CGGCGTGGATCTCCACGTCGCAGCGCGCGCACAGCGCCGCCTCGTCCGCGCAGCACACCA
CCGTGGCCGCCGCGACCCCGCACGAGTCGCACTGGATCTTCATGCCTCTGCTTTTCTTGC
TTTCTCGCTGGCCGGAGAGCGCTTTGCTAGGCTTGAGCCGGAGAAGAGATAAGGGTGCTG
CGAGGAAGAAAGGGAGGCGGGATTGGCAATGAGGAGAGGGATCCAGAAGCAGGCGGGCGC
GAGTGGTGCATATAAGCGCAGGGCCGTGCACGCAACCGCGACAATGAGAGAGCGCCGCAG
CGAGCAAGAGGCAAGAGGGAGGGAGATGAGCTTGTGGTGGAAAGCTGGCCGCGGGAAACT
CGTGGACGCGGGCGCTCCTCGGGTGGTTGTACCCCACTGAAAAGCAACAGGGTACGGGCC
GCGATTTTGATTTGGTTTGATATTTTGATCCGCTCTCTGCTGACTCGGCACATGCACCGA
ATACATACATTAAAACCAAGGAGGAACGTGTGGTCGTAGCAGTCTGCTGCCCGCCTAATT
CTACTCCTTTGGTTTTTAAATACTATAAAAAGAGCCCTTGCCATAAAAAGAAAATAACAC
TTACTCTTAACACAATAACCATGGCTCTAGACCTTAATAGGTCTACGTCTTTTAGTTTCA
AATGACATCACATTTTAAGGTCCCTTTCTCTCTGATAGGAAAGAAGTGTCCGTGCGTTAC
AACGGGAAAAAAGGAACAATTCTGTCTATATTCCTAGCTCAATAATGTAAATTAAAAGAA
TAACTTTTTAAACAAGGCAAAAAAAATTTGAATAATGTATGAAAATGCATGGAATCAACA
TTAACACAAGCATTTGATTTTATGAAAAAAAAGAGAGAAAAGGTATTTATTTACCTATAG
CCAGTAGGGCTGTCAACAAAGCCACAGATGTTACATACAAAGGCATTGTAGTCTTTAAGT
TGAAGTATACATAATAAAATGTAATGCATGACATGCTTGATCTAAAAAGGTTATAGTTGT
ACTGAAGAAACATAGACCGCAGGATGCAAGCAAATTTTGTAGTAATGTACGTTTATTGGG
TGAGATTGGGATTACACCACCATTTACTATTAGGTGTAAGATGCTCCTCTTTCTCATTTT
TTTCTAACCAAGTAAACCGTTTTGTTAGTGCGATTTGGTCCTCGACAGCAAATGGAGTCT
CTTTATGACCTGAAAATATAACCAATAAACAATGAGTGAATAGTATCATCTCTTTATTTC
AAAGGGATATAAATTATGGTTCTTTGATTGCTCTACCCATTAATCTGGCAACTTATATTA
AGCATATATCACAGATATATATGTATCATGGTTTCCAAAAGCTATTCTCCAAGAGGATAC
AACAATAAGAAGCCAGGGATGAATCATTATCTTTTAGCATGGACACCAGATGTTCAGTGT
TTTGTTATTGCATTGAATAGGAAAGATAAATCATATATTGCATTTGCAACAATATTAATG
CCATTTCCACTACACCACAGCTTAGAGTAGTAAAATATCTAGCCGACTCTCTACGGTTGA
TTTAATTAAGAACCACCCACACATTTTGTTCTACATGCAAATTGAATATTGAAGTGTGCC
TAAAATCGAAAGAAAAGAAGTAGCAAGGATGTGACAGCCCGATGCCGANNTTCCAGAAGA
TTCCCTTTCCTTTTCGTTTTCGTCGTGTGTCTATTTTTCATTTGTCGCATCACCATCGCA
TCATCAGCATTGCATCGGC