Map Locations of contig_2554026 (2412 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2554026

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39607 1 408 bp AK357958 Not available Available None





CDS Structure of MLOC_39607






Contig Sequence (2412 bp)

>contig_2554026 2412 assembly3_WGSMorex_rbca.fasta
GCGGGGGGGATTTTCCAAGCAAACCATGTTGAAGAATAAACTAGTGCAAAAGATCGTTGT
TGAAGAATGAAGAGTGGTCGACAACAGATGATTATTGAAGAATAGACCGTGGATGGTGTT
TGTGGTCAATGTATATATAGTTTGATGGACAGTACGATGGTGTGGTGTGTCGCACCTTAC
CCTTATCTATCGTGCGGTGCCGCAGGAATGCCCGTGCGAGCACGCATAGAAAGAACGGGA
GTGTGCCGACATGCAACGTCCTCATCGGATTCCAAATACAGCCACGTGAACTAATCAAAA
TCAAGCACTAGGCACTAGCTACAGTCAGCTCCAATAGTGAAAGTTGTTACTACTGTTCAC
ATCAGTGTTGTCCGGAGATCGATCACGAATATCTCCTTGCAACAGACAGATCGACGACAA
CTCAAGGTATCCAGTGATGTTAACGTGCAACTCACGGACGGTCCAGGCCGGGAGAGAGAC
CTGCTTGTCTTGTGTGCTTACTGCTTAGTATGTTAACAATTTTTATTAATAAAAGGATGA
CACTAAAATTACGGAAATGTATGTACATAATTGAATTATTGGATACAAATGTGTAGTCAT
ATGACTGTTGTGAATACAACAGTTACACAGCAAAATGCATTGGAGCTCCCGGATGTAACG
TACCCCTATATGGAACTTCCATTAAAAATACTGAAAAATATTTAAAAATTCTGAATTTTG
GGATATAAAACATGGGCGTCCGTTGTACATCCATACCCATTTTCGCAGGGAATGGGCACT
CGTGGTGTGTCTGTTGCATTGGAATTACGATTGTTGCGAATATATCCCTTAGAAAATATG
ATTGTTGCGAATATATCCCTTAGAAAATATAATTATCAAACATGTTTGTTAGTTATGGAA
AACTTGTAGCATAGTAAGTGGTGGAACCTAGAGAGTGAAATTTGGGGAGGTTGGAATGAT
AAAAAAAGGGAGAGGGATCTTCTGGCGAGGCTTTCCAAATGATAAAAAAAGTTGGTATCT
TCCGTTGTACTCGCTCTCACGTGGCATAAAAAACTGACGTCCAATACAGGCACACACACA
CAGTGCAATGACAAGAACACTTGACACAGAGCAACCCTCTCGGAGTCATGGGCGGATTTA
GGATGTGTCTTCCATTCTTCCTCTACCGTCTGCTCAGTGTCCAAGGATGGCAACGTTCCT
ACCGACAGGTTGATCAAGACGGGAATCTAAAGACAAAATCAAGGTGGAAACTCCAGTACT
CCAATCACAAGTGTCCAATATGTGAGGTGTCCTAAGCACCTAATCTAGCAAACAAGCAAG
CAAGCAAGCGCACTCACTGCTCGATCGAGCAAGCACGCGGAGCAATCATCTATAGAAGAG
CATGTGCATACGTACCATTCGGATCTGCTCAGCACCATCCGGAAGTAACCATATTATGCA
TGCATGCATGAATGATCCATCCATCATCCGAGCCAGCAAATTGGTCGGCCATGTACAGTC
CACACGAAGAATCAGATTAGCTAGTAGCTTAATTCATTCAGTCAGAAGAGAGCAGCTAGT
TCTATATGGAGATCCTACGTACCGTTCTGCCAGTTCTTAGCAGGCATGAAGTGGTACGCG
GGCCTGATGCCCACGCCATGGCGGACTAGCGAGCTCTCCGCTTCGGAGAGCCGGCGGAGT
GAGGAGGACGGCAAGAGGAGAAGGCAGAGGTGGAAGGCGACGACGCAAGCGGCGAGAGGG
AGCCTGGCCATTGCCACCCACAGCGGGGAGGATGAGAGCGGCGCTGTGGTTGGACCGGTG
GTTGATCTCCCCCTCGGAGTCGACGAATTTATAGCGCGCCAAGCAAGTTGCGGACGTGGA
CGTTCACTCGCAGTCACAGCACTGGCCATAATATGTGCCGTCCATCAGTAGTGATCTGAA
GGTCGGGAGCCAATCAATATCTTTTTTTTAATGCAGTAAAGATGCGAGCGTTTATATAAA
CACACATACATTTATCCTTATAAATGCATACACACATCGATTCTACGTGTATGAGCAACT
TCGAGATACGGATCCGGCATATCAAGTTAAGATTTACAAAGTCATAATATGTGTCTCGTC
GTTGACGAAAACATGTTTTTTTATTAAGTGCACATCTTCGAAAATTTTAAAATAAATTTA
AAAATAATATAAGCATTAAAAATTAAATCTTGATGGGTTGGGATACAACTGTCTTTTTAA
TCATTCAAGCGAAGAATGGTTTACAGATAATCAATACTTGAGGACCCTAGCAGCACTAGT
TTCAGGGCCTCTTTGATTCGTAGGATTCTCAAAATGTAGGAATAGGAAAAACGTAGGAAT
AGAGTGACATGTCCTTTTCTACACTACAGGATTTGGAAGTGTGTTTGATAGCACAGGAAA
AACAAAAGAATT