| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_2553960
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_39585 |
1 |
1026 bp |
MLOC_39585.1 |
Available |
Available |
LOC_Os02g33380.1, FRAME:+2, EVALUE:2e-68, 13102.m03618 protein pectinesterase inhibitor domain containing protein, putative, expressed |
CDS Structure of MLOC_39585
Contig Sequence (6455 bp)
>contig_2553960 6455 assembly3_WGSMorex_rbca.fasta
CCGCGAGTACGCCGTGCTCGAGCCCAACATGCAGGGAGGGGTGATTCTGTAAAAGTGAAA
CATTTTCCAACTTAATAAAGGACTGCAAAGGACTATGGGTTGATTTAGAAAAAACGAAAG
GGTGTTTTCGCAAAAATGCCATGATGGACGACCAGAAATTGTATTTGCTTTATTATTAGG
GAGAGATAAGGCAAAGATCTAGGCCGACATTTACAATTTTTTCCTCTAACTTTGGTCCGA
CCTCATCTTTACCCTAAAAAAAGTATTCAACTTTGTCCTTCTTCCGCTAGACTCAGCTCA
TGCCCGTGCGTCGCTCCCTAGGGGCGGCTCAGGCGGAAACCCTAACCACCACCCCTGTTG
TCCCCTCTCCCTCAACACTCCTCGCCGCCACCGGTGCACTTCGGCGGGCAAAGCTCGTTG
GCGGTGGGATCTGGCCTGCGCGCGCTCATGCTAGTCGGGCGCGACCCTCACGATGGAGGG
AGACCTGGAGCTTGTGTGACGGCACACGGCGGAACTTCACATCGGAGTGGTGGTGCGTGG
CTAGGGCTCGTGGGAGGAGTTGGTTGCGACGCGGTGGCCCCTCCTGGAGGCGACGGCGTG
GTACATGGCAGGATAAGGAGGCGACGACGCGGCACGACCCTCGTGGCGTGGTGCTCGGCC
AGGAGTTGCTCCGCTTGTAGTGGCCGAGCACGTCGCAGCCCTAGTGCGTCTGTAGTGGAG
CCCCCTCCTGGTCTTCGTGGTCGTGGGTCTTGGAGGCGGTCGAGTGTGATGGATGGGCCA
GATCTGGGTTGTAGGGTCGTGACGCAGTCGGTTGCCGGGAGTTGGCCTCACGACTGGGTG
TGCGATCCGGCACCCCTGGTCAGGCATGGAGGATGGTCGGCGAGTTCTCAGCCGTGGAGG
TGCTGGTAGTTGGGCTACGTGCTCCTGGTTGTGTGGGTCTTAGGTGGACCCGACTTCTCG
GCTATGATGGTGAAGTGTTGCGGCAGCGGCGGAGTGGCCAACTTGGATGGTGTGGTTCCA
GTACGGTGGGCAGGGATGGAGGTGTGCGATGATCCGGAAGAAATTTTTGCCCGTGCTCGA
TCGGTGCTGGCGGCGGGCACCCGGCGTTCCCCTTCTTGAAGGCGTCACCAAGGTGTGTCG
GCATCTCCATCTCTCGCTCATGTGATTGGTAGCGGTCTTCGGATGAAAGCCTAGGTTCAG
AGTTGAACCAGCACGAAGGCGGCGTGGTCTACGTCGTTACTCTCTTGGGAGCACCTTGCT
TGAAGACACGATCTTGAAGTTCCATGTTGCGCTACTTTCGGTGTTCGCCGTTGTCCAAGA
CAATCTTCAATGGCACAATGTGCGTCATCATCGATGAATCCAAGACGGTGCCTTTTATGG
ACTGTTCAAGTTCTCTCATCTACTTGCCACCTCCTTTTAGGCATGATAGGGTGGATGGTG
CGTCGACTGGGAAGTTTACCCGGAGTTGGTGTTGTCTTCGGAGGTGACCGACGATGGTCA
AGACGCGGCATTTTTTGCTCTGTTGTAGGACAAGCTCTTTTTTACTTTGTAGTGGTGTCG
TCGGTGGTGATTGTCTTCGGACTAGTCCTTGTGTGGTGTTTGCACTATGCTTGTTGTTGG
CAACAAGTTGTAGTCTTGTAATACAAATTCTGCCTTCTATAAAAAGTACGGTACGCATTC
TCATACTCTCAAAAAAAATACCCTTCTGTACCGTTTCCGTCCGGTCAAAGGGGTTTGATC
GTTAGATCGTGGAAGGAAAAACTATGTCGAGGAAATGTCACGATAACAGTCAAACCCATT
TGACCGGACGGACACGGCATAGAAGGGTGTTTTCATAACGCCATTTAACGGAAGAGGAGC
AAAGTGCAAAGTTAAGCATTGTTTTTTTAGGTAAAAATGAGCTTGGACAAAGTTAGGAAA
AAAAGGAAATTGGCCCTTTATTTTTTTGATCAACCGAATAAAGGAGGAGAGAGAGACCTA
TGTGACAAAAAGTAATTTTCTAATGTACGCGAGAGATTGCGGCAGGTTCTAGGTAGGAAA
GAAGATATACGTACGTGAGGGGTTGTTTAAATTTTTGGTTGTTTCTTTTGGGTCAAGGAC
TCCTCCAAGAAAAGCTCGGTGGAGATGAATATTTTTTTATAATAAGTTGGTCCCATCAGA
TCAACGGACACTAATTTTAATTAACGTGGTAATTTCTTAAAAATGATTAATTAATATAGA
TATAGATAGATAGATAGTAAAATATTAATAAATATGCCCATGCGTTATAACGGAAGAAAT
AAAATCACCCACACCATACGCACACGCAACAACATCAGAAAATCATTTAAAATCTCTCAC
AATGCCGTATAAAAAACAACATGATCAACTGTGTTGTGCGTAAATATAAAGGTGGGACAA
TTTTTTAAGTAACTAAAGTTGTGTTCATTTTATTAGACAATATAATTATCTATCTAGTTT
CCGGTATCAGTTGACGTCTTTGTGGTGTTGCTTCTTAGTGATACCCAAAAAATTAATACA
TTAGGCAGAAAAAAGCAAAGTACACTTTAGTATTCAATGATAGCATGTGCATAAGAGCAA
TAGTTTTGTCTTATCCATATATGTGCTTGCAATAGTAATTCAAGTCCTTCCGCAAAAAAA
TAGTAATTCAAGTCAAGATTTAAATTGCTTGCAAACATGTTAGATATCTCCACCAAAAAG
AACCAACCTGACATACATAACGAATAGGCGTTTTCAAAATACCCCATATAAAGTATTAAT
TAAAATTATGGGTGCAATATAAACGTAATTTTAGAAATGACTAACACGCAAATAATATCC
TATTTGGAATATGCACATTTTTCCGAGTTATTTACACATTCTGGCCTAGAACTGTCGTCA
TCGCTCCTCCACCATGAGAGAAAGAGTACGACTGCAGGCACACGCTTGTCCGTCGCGGGT
TGTCCTCCGGCTCTTCCTCCGCGGGTGACTCCTCCGCCGGTGCCTCGAGCTCGCGGACAC
CGCTAATGTCGCTCAAAAGAGAGACGAAGGAGCTCCCGCCACTCCGCGTGATGAAGAGGG
AGCCGGAGCCGGAGCGGCGGGGCATCATCGGGACGGAGGATTATCTTCCCCCGGTGGAGG
CGGACGCCACTGAGGCGGCCATCGTTGCTCGCTCTACGCTGGAGGAGAAGGAGGGGGAAG
AGCGGCGTCGATGGGACACCGATATCGACAAGATCTTCCTCGAGCAGGGGATCACGGCAG
CGTAGGAGTTTTCCACCCAAGAAGACTGGAGCCTCATAGCCAAAAAAACAGGAAAGGTTT
ACGTCGACCTCGTCTCTGGCGATGAGGATTGAGCTCCTCCGTCGACGCAGCGTTGCCACC
GCAACCTCCCCGGCTCTGGTGAGCCAAATTTTGTAAATTAGGATTACGATGGTGTGTGGC
CTCCAAATATTATTTGTAGAATTTCTAATTTGTGTGACTTTTGAAGATGATCGACTACTA
TGAACAAGTTCAATTTCACGCTCGAATGTTTGATTTTAAATTTTGTGGGTTCATATTCAG
TTTCTATTCTGTTGCGGCTGTTTTTGGCTTGTATCTACGAAAAACCTTGAAATTTAGATG
CGCTATAACGGTCCGCATTATAGAGGGTCTATAGAGTTACTCTAAGATCATCTCTAGTAG
ACCATTTGTAAGGTTAGCCGTTGTAAATGGTTTACGATACGTGTTTGCCTCATTTTTAAC
GGCTAATTCGGCTTCGGCCGAGAAGAAATTGTATAAAAAACATAAAATTTTGAACGCGCT
GATTTCCTTCCCCGACTCTTACAGGGTAGCGCCGATTTCCTTCTCCTGCCGGTGATGTTG
CATCTCCTCCTCCCGTACACTGTGCGAGGATAGTGGCCTCCATGGTTCCGCCTTCGCCGA
GGGGGAGGAAATCCTCTGGCCCGACGACGCCACCTCCCGGCTGCTCCGGCTCCGACTCTC
TCTTCAATGTGCGGAGCGGCGTTAGCTCCTCCGGTTCCCTTTTCATCGGAGTGAGGGGTG
TACGGGAGCTCGACCCTCCGACGGAGTTGCCTGCGTAGATGGACAGTCGCGCTTGCTTGC
GGTCGTACTCCTCTGTCGCGCTTGCCTACGGGTGTACTCCTCTGTCGCGCGGCTGATGAG
CGACGACAGCGTCTCTAGGTTGTGGTTGGTGTACTTCCGAGCGACCCACTTCCTCGCGGT
ATAGAAGGCAATGCATCGCCGCCGCTTGAGGTCGTCGCCACCGTCGGCGCCGCGGCCTGC
AGACCACGTTCCTACCACATCAAGAAGACTGAGGTCGCCGGCAGCGAGAAACCGAGAGGG
GGATTGGGAATTGCGGCGGCGCGCGGATAGGGTTTCGACCCGTATTCCAGCTGCAAACCC
TTACATATACTGCATGGGGAGGGCCGGTTTGCGGTCAATGTAAAAACATACGGGGCCGGC
AACTATACGGGCTATGATCTGGTCCAAAAAAAGGCCATACTCGTATAATCGCCGGATTCT
TAGGATTTATCCCGTTTTACGGGGTCTGCTAATGATGCTTTAATAACAAGGAGTGTGTAT
CCATAATCTGTAATTGAATGGTTAGAGCGGTAGTAGTATCCAATTCAGCGAGGTTTAAGT
CCTGGTGTTTGTATTATTCCTGGATTTATTTTAGGATTTCCGACGATACGTATTTAGTGA
GAGGGGACGTTTCCGTCGACGACGAGGCGCCTATTATGACTTCGTAAATCTTAAGGTAAT
ATACCGATCCAGTCTTTCCATGATGTTCATAAAGATAAATGTATGTATACTTTTATAAAG
ATTATACAACGCTTGCTTGCGTGTACTGTATTGAGTAAAAAAAAAACGTAAGAGAGGAAC
AATCATTGCAATGCCCGGTGGTCACGCCCATGCGAGCCGAGGATGTACCGGTGCTAGTAC
GAGCCTACTAGGAAATATCTCGTTCATCTGTGGCTGGGCCTGGCCGAGGCGCGCACACGC
GTCATGCAGAGACATGCAGTCCCCACCGCAGTCCTGTCCCAGCTCCAAGCAAACGAGCAC
CGTCCACCTGTGAGCGTGCTACAGAGCAAGACAGTCCGCCATTATAACATCAGTTGCGCG
AGCAGCCGCTCTAGCAAGCTCACTCACTCCACACTCCGGTTCTGTGGAACGGACGAAGCA
AACCAGCAACACCGAGCGATGATGTCATCAACTACCGCTCGCGTCCTCGCGGCCGTTCTC
GCCGCCGTGGTCTGCGTCGGCGCGACCCCGGAGACGACGTGCAGGGCGGCGGCGGGCGCC
GACCGGCGCGTGGACTACCGCTTCTGCGTGTCCAGGCTGAGCCAGCACCACGACAGCCCC
GACGCCGACACGTGGGGGCTGGCCAAGGTGGCCGCCGACGTGGGCGTCCTCATGGCCGGC
AACGGCGCCTACGACATCAAGGCCATGCTCTCCGGCAACAAGGCGGCGCGCGGGCCGCTG
GAGCAGTGCGAGGCGCTGTACGACAGGATGGGCTCCGCGTTCGCCGAGGCGTACGACGGC
ATCGACAGGCGCGACTACGCGACCGGCAAGGCCAAGGCCGGCGAGGCCGCGTCCCTCGCG
CGCCGCTGCGGCGACGCCTTCGCCCGGGCCGGCGCCGCCGTCCCGTCGCGGCTGGCGAAG
CAGGGCGCCGACTCGGTGCAGATGGCCATCGTCTGCACCGCCGTCACCAGCCTCATCAAG
TGATCTGATCTCTCTGCATTGCATTGTTTTTTGTTTGTCCGTCGGGTGAAAAGAAAATCG
TGGTGCCTGCACTGCATTGTTGGTTGCTCGACGCCCGGGAGTCCGTCATGTCATGCACGC
CTGTGACTGTGTTCGTGTCTCCGTTGTGTGTTGTAGTATCATTCGGAAGGGAATAAAGTG
TTGCAGTATTTCATCTAATTCATGGATTTGCTTCTCTTCCTCTCCTTCATCGGTGTGTCG
CTGTCCGCGCCAAAGTAACCGGCGGCGTTCTGTGCCAAAACCCCAAGTCGCCGGTGACGG
GAGGGCGTGCACATGCTCCCCTGCCTCTCCGTGCAGTGCACGAGCCGAGATGTGAATTGC
ACCGATTTTTTTGGGTGGAAACACCTCCGACTGCCACCTGGTAGGAAATGAGGTGCGGGC
CAGAGGGAAGGGGAGGAGCAGTGCTGTCATTGTCCATGTCGGCTGCGTGGCGCGAGGCCG
CGTGTAGGGGTCCCGTGTCACATGTCATTGCCGAATAAGGTTTCGTCGTTTTGAGGCCCA
ATACACCTGTACAATACACATCTGTAAAATAAAAACGGATGGCCTCACGTTGCTGCTTGG
CATGTCGTTTTTTGGCTGTAGATTTTACACTGGTTTTCTCGCTTACGCCCGGATTAGGGC
GGTATTCGATACAGACCATTTTCCATCGTTTTCTTGGTCCCCGTCCGCTCGATCCGCCGC
TGCCGCTAGCCAACCCCCTTCCCCCCCCCCCCCCC
