Map Locations of contig_2553894 (3614 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2553894

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39570 5 1782 bp AK361603 Available Available None





CDS Structure of MLOC_39570






Contig Sequence (3614 bp)

>contig_2553894 3614 assembly3_WGSMorex_rbca.fasta
CCGGGGCGCCCTACGGCGGCTGGGAGGGCGCCGACGTCGAGCTCCGGGGCCACTTCGTCG
GTACGTTACGCGCATCACATAACTAACCCAACCGTAGCCAGTGCATTATCCTATCAAATT
CTAGTGTATGCGGTTCACGCTCGCCATTCGTGGAGGTCGTGGGAAAATTAACCCGTTCTT
TGTAGAATTCCCATGAGACTCCTGCGCTGGCTCTCGTAAAGCAGATGTTCCCTAACTACC
GTGCATGATTGTTTGGGTTGGATTGGATGGAGGACGAGGCTGTTGATGGTTCCGGCCTGT
ATATCATCAGATGGGCCGTGGGGTTCAGGGTTGGATAGAGTTTTGGCCCACGAAGAGAAG
AGATCGGCTGGCTTTTCTACTAACCACAATTCTTCGATGGCAACATTTGCGGAGTGTCTT
TGTTTGCTTATCAATTTATTAGGCTTTTTTATTTGTTTGGATGGTTCTGGAATCTATTAA
TGTTGGAGCCAACTTGCTTAATGTAGCTTTTTTTTTACATTAGTCGAAGTCAGACACGAT
TCTTTTATAATTAACTGAAACCATAGACGTCTTTTAGCTGAAAACACAGTAGTTTTTTTT
CGGGTAAATAGTACATGATTGTAGCTAGACTAACATTTTCACTTGGTGATTGTAGAGGAA
AAATAATTCTTTCACGGGGTGAAATTGGGTTCAAACAAGGCATATCATGGTTGTATACTT
CCTCCGTTCAAATTATTAATTTTTAAAATGTCAATTAAGAACATAAAGAATATAGCATAA
AAATAAAAATCAGCCCAGGATTTTCTAAAACTAAATTGGCCAAGGATTTTTTAAAAGTTT
AAAAAAAAATCCACGAAAGTAGTACAATAAATAATAATCGAGCCAAATGGAGCGGCAATT
CACGTCGCATACACTGCAATGCAGGGCACTACCTGAGCGCGGCGGCCAAGATGTGGGCGA
GCACGCACAACGGCACGCTCGCCGGCAAGATGTCCGCCGTGGTGGACGCCCTCCACGCGT
GCCAGCAGGCGCCGGCCAACGGTGGCGCCGGCTACCTCTCCGCCTTCCCCGCCGAGTTCT
TCGACCGCTTCGAGGCCATCAAGCCCGTCTGGGCTCCATACTACACCATCCACAAGGTAC
ACCCTCTCATCTGCCATCTCTCTTCCAAAACTGTAGTGGGTGAGCTCTGAGACTGAAGAC
TGAACGTTTCTTCCTGGCGACCGGGGGGCAGATCATGCAGGGCCTTCTGGACCAATACAC
GGTGGCCGGCAACGGCAAGGCGCTGGCCATGGTGGTCGCCATGGCAGGCTACTTCGGCGA
GCGCGTGAGGAGCGTGATACATCGGCACAGCATCGAGCGGCACTGGACGTCCCTCAACGA
GGAGACCGGTGGCATGAACGACGTGCTCTACCAGCTCTACGCCATCACGGTTCCTGCCAC
CATCACCATCTCTTGTGCTACGTGTGTTCATGGCTTCATGCTGCCTCTGACTCTGATGCT
GACACGTTCTGTTCCGTTTGCCAGAATGATCAGCGGCACCTGGTGCTCGCCCATCTCTTC
GACAAGCCGTGCTTCCTGGGATTGCTTGCAGTTCAGGTCTGATCAGCTTCCTTTTGCCCT
GGGTGGCTTTCTGATTATCTGATGCTTGCTCTGCATTTTGTTCATGGTTTACTAAACACA
CTCGACTCGAAGCAATAGCATGAGCTACATGTTCTGAATGGTGTGCCTTCTTCCCGTTTC
CTATCCAGGCTGACAGTCTTTCGGATTTCCACGCCAACACGCATATTCCGATCGTCGTCG
GCGGGCAAATGAGATACGAGGTTACCGGTGATCCTCTCTACAAGGTAAAAGTTGCTCCAA
GTCTACATTTTCTGGAGTTTTAAGTGTGAATTTGTTTCAGCATGAGTTGATCCGGGTGAC
AGTGAGACTGACAGTAACATTCGTGAAACAGGAAATTGCAACATTCTTCATGAACGTAGT
GAACTCTTCCCACAGCTACGCAACCGGTGGCACGTCCGTCAGTGAATTCTGGTAACGGAT
TTCTAGAATGATGGCAGAAGTTTACAACGTGCCTTCTGTCAGGAGTTCCATTTTTGAAAT
GCTTTTGCCAGGTTCGATCCGAAGCGTTTGGCCGAGACTCTGACCACCGAGAACGAGGAA
TCCTGCACTACATACAACATGCTAAAGGTGATCTACACCATCATCATCTTCTGATCACCA
AAATAACTCACCATCCCAAGAATCTCTGTGCTAAAGAAATTCTGCAGGTATGTCGCCACC
TCTTCAGATGGACGAAAGAGATCGCGTACGCGGACTACTACGAGCGCGCGCTGATAAACG
GCGTCCTGAGCATCCAGAGAGGGAGGGACCCCGGCGTCATGATCTACATGCTGCCCCAGG
GCCCAGGAAGATCGAAGGCACTGAGCTACCATGGCTGGGGAACGCAGTATGATTCGTTCT
GGTGCTGCTATGGGACTGGTAAGTGGCAGGCAGATCTCTAGGTTTCAGAACTGGCAACGG
AGATGACACTGAATTGTTGTCTGGCCTGTTATCTGCAGGGATAGAGTCATTTTCCAAGCT
TGGGGACTCGATCTACTTTGAAGAGAAAGGCGGCAAACCGGCGCTATATCTCGTTCAGTA
CATACCGAGCACGTTCAACTGGAGATCTGTGGGTCTTACCGTCACTCAGACACTTAAGCC
CCTCAGCTCATCTGACCAGAATCTTCAGGTTTCGCTCTCCATATCTGCAAAGGTAAAGCA
AAAAGACTTTTTCCATGATGATTCGCTGGAAAGGATAAGGGTTTAGTCAATTTGCTTTAT
GCCGTGCAGACGAACGGCCAGTACGCGACGGTGAATGTGAGAATTCCGTCGTGGGCATCT
TCGAATGGCGCGAAAGCAACGTTGAATGGCAAAGATCTGACAATGGCATCTCCAGGTATG
TTTTTCACAGGCCAGAAAGGTTTGGCAAATGTTGGATGAAACAGTGGCTTGATTGTTCTA
GCTCGATCTTTGATTTATCAGGAACTTTTCTCTCGGTCACGAAGCAGTGGGGTGGTGGTG
ATCACCTGGCACTCCAGCTGCCTATTAGACTGAGGACAGAAGCTATAAAAGGTCTGAAGT
CTTTCACTTTTTTTTTCTTAACTGTATATCAATGTATTTCTAGAGTGAACTTATCAAACT
CACTATTACAAACTCCAGATGATCGGCCGGAGTATGCATCTCTCCAAGCAGTCCTCTTCG
GGCCCTTCCTCCTCGCCGGCCTCACCACCGGAGACTGGGACGCCAAGACCGGCGGCGGCG
CCATCTCGGAATGGATCACCGCTATCCCGGCAACGTACAACTCCCAGCTGGTGACGCTGA
CGCAGGAATCCGGCAACAGCACCTTGGTCCTGTCCCTCCTGTCGACCGCGAAAGCCACCT
CCCTGACGATGCAGCCGCGGCCCGAGGGCGGCGGGACCGACGCCGCCGTGCACGCCACGT
TCCGTCTGGTCACCCAGGGGCAGGGCACCCCCCCCCCCCGGGGGGGGGGGGCGCCCCCCC
CCCCCCCCCGCGCGCGCCCCCCCCGGCGGGCGCGCGGCCCGCCTTTTTCGCGGCGGCGGA
GGGCGCGGCGGCGC