Contig Data
morexGenes
Links



Map Locations of contig_2553834 (2904 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2553834

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_39555 1 1672 bp MLOC_39555.1 Available Available LOC_Os06g20354.1, FRAME:-1, EVALUE:5e-101, 13106.m02176 protein PPR repeat domain containing protein, putative, expressed





CDS Structure of MLOC_39555






Contig Sequence (2904 bp)

>contig_2553834 2904 assembly3_WGSMorex_rbca.fasta
AGGAACGGAGGGAGTAGTAAAATACAAGGGTCACTGAGTTACCTATGACTGAGGCTATGA
AAACTATTGCCCCTTGTCAAACATTACCATAATAACAAAATTGAATAAGCATTAATTTGT
TATTAAAACGTTTATCAGCATACCATCATGCTGAATACCGATCTCCGGTATATCCCTTAT
TTGATCATCAAGGCTGTCACTGTAGATCCTGGTTTCGATGTCACCCTTAATATATTACCA
CAGAGCTGAAATAAGGCTATGTTTATATGTAGAGAGGAAGGATGAAATCTTTGTATTTAA
AATTTGGACTCACATACTTCTTCACCAATGGTTTTGTTCCTGTTGTCGCTGCCACAACAG
TTTCAAAAAGTGTAACCATAAAGATCATGACAGTGTGTGTGCTGGTCATGATAGAAATTA
TATCCATGGTTATTTTATCTAGCTTTATCCATGATAGAACTGATTATAATGCATACAACA
CCAATCAAATGAAAAGAAAAACTACAAACACTGAAAATAAGGAGGAGCAAGCCATGCAAG
ACAGGATATCAATCCTGTCCTGTGCAACAGAGAACAAACAGTAGACATTTTGATTACGAG
TGACAAGTTACGAACTAACAAGTGTTCATGCAACAACATCGTGCTATCATATACTTCCTC
TCTCTAAAAATAAATGTCGTTGATCTGGTACAAAATTTATACTAACTTAGTATTAAATCT
GCGACACTTGTTTTAGAACGGAGGGAGTATATATGAAAGAAACAGATAGTGCGTACCATT
AACTATGATGGCTTCCCAAAGAGCATGTTCATGACAGCCCTGAAGACATGCCCCCGCTTG
ACGGTGCCGCCGCGCACTGCCTCCTCGTCCAACGTGAACCCCTTCTTCTTCATCATCTCG
AGCAGCGCCTTCCCCTCTTCGACCTTGTCCATCCTGACGTGCGCCTCGAAGGCAGCAAGG
CAAGTCTCGACATTGGGGCGCATCCCCCGGTCGAGCATCTCCAGCAGGTACTTGCGTGCC
TCAGCGCACCGGTCGCCCGCCGCGAGCCCCTTGACAAGCACGGCCATGGTGTAAGCGTTG
GGCGCGACCCCGCCGGAGAGCATGCGGTTGTAGGTGCGCACGGCGTCGCGCCAGCGGGCG
GGGCCGGCGGCCGCGTAGGCCTCGAGGACGGCGGTGTGGGCGACGACGTCGGGCATGGCG
CCCTTGTCCCTTATGACAGAGAAGAGGGCCAGCGCCTCGTGCGTGAGCCCGTCCTTGGAC
AATCCGTCGAACATCTTGATGGCATAGTCGGTGAGGCCTCCGGTGCGCATCCTGTGAAAG
ATCTCCTGAAGGTTGGTGGGGTCGACCGGGTCGGCCGCAGCGGGGTTCTTGCTGAAGGGT
TCGTAGGGCGGCGGCGGAGCGGGGTTCTTTGCCGGGGACGTCGGTGGAGGCTCGGCGGGG
CTCTCGTCGTCGTCGGACCAGTCGAAGGAGACGGGGCTGTTGGTGTTGGGGCTGCGGTTG
GGCGGTGGAGAAGCGGTGGAGGAGAGGAGGCGGCCGGCACTGGACAGGGCGGCGGAGGAG
GTGGGACGGAGTAGGCGGCGGACGGCGGCGACGGCCATGGGGAGGGAGTGGCGGAGCTCC
TTGGGTTGCAGTTGCACACACGGAATGAGACGACCGATCCTTGAGTCATATCGGACATGT
CGTAGACCGTCGGATGACGAGCACGATGGCCATCAGATCTGGTATTACAGCCACCACGCT
CGGATAACAAGGTATGTGATGAATGTCATGGCTCGCCAGGCGCTCGGCCGTCTAACATCG
GTCTTAAAACGCAGGGCACATGAAAAGCTTGATGCGCATAGGGGCCTCGGATTTCTGAAC
GTTGGCCCGAGCAAAATAGAAAATCAAATTAAAATTGAATATCTCGGTTAAATGGAAGAG
CTTTAAAACTAAGAAACATAGCGCGTTAAAATAATTAAACAGGCTCCCAAAAAAAAAGAA
TTAAATAGGAGAGCTTCATGAGAAATTGTTGACCCGTCAAAATCGACTGACCTAACTCAA
AATTAAAGACCTAAATTAATTATGAGGCCTTAAAAATCAGGAAGCATAGTGGATACTAGA
AGGATTGAACGCGCTTTGCTGCGTGGTTGGTGTTTTTGATTTTCATAATTTTTATACTTC
GTCTATCTTAAAGTATATGTTGTACTCCCTTCGTTTTAAAATTATTGTCTCGGATTTATC
TAGATATGAATGTATCTAGTCACATTTTAGTATATAGATGCATTTATATCTAGAAAAATT
TAAGACAAGAATTTTGAAACGAAGGGAGTATTAGTTTTTTAAAAAGTCAACCCTCTTTGA
ATTTGACCATGTTTTTATAGAAATATATCAGTATGCATAATATCAAGTCAGATTCTTAGA
TTTATCATGAAATGAATTTTTATATTATTATTTAGTATTGTGGATGTCCACAAACGAACA
ACCATCTAACCGCGAGTCTGAACTCCCACGATTAGTGCATCACAATACTAAGAAAAATAT
TATAGGTAGGAGCCTATTAGTAGCGCTGGAAAGTAGAAAGCGATGCTGCTATTTAGCAGT
AGCGCTGGGCACAACGCAGCGCTACTGCTAATGTCCTTAACAGTAGCGCTGGCCTTATAT
TCTGTGCTACTGATAAACGGGGACCAAGGAGACCACCCGCAGTAGCTATAGTAGCAGCGT
CGTTCCTAAACCTTCGCTACTACTAAGGTCAATATCAGTAGCGCTGCGTAGCATCCAGCG
CTACTGCTAAAAGCGGCCTAACGACGTAACCGCAGTAGCTGTAGTAGCAGCGCCGGCGTG
GTAAAAGCGCTACTCCTAAGTACAATAGCAGTAGCGCTCCTCCGGAACCACCGCTACTAC
TATGTTGAGTTAACACCCCGCGCC